RNA–Protein interactions for RNA: ENST00000474962.1

CLIP2-204, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 3

Gene CLIP2, Length 690 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-204ENST00000474962 EIF4A1P60842 406 aaKnown RBP15.57■□□□□ 0.08
CLIP2-204ENST00000474962 HLFQ16534 295 aa15.57■□□□□ 0.08
CLIP2-204ENST00000474962 CLEC4GQ6UXB4 293 aa15.57■□□□□ 0.08
CLIP2-204ENST00000474962 CNBD1Q8NA66 436 aa15.57■□□□□ 0.08
CLIP2-204ENST00000474962 PNISRQ8TF01 805 aaKnown RBP15.57■□□□□ 0.08
CLIP2-204ENST00000474962 NRXN2Q9P2S2 1712 aa15.57■□□□□ 0.08
CLIP2-204ENST00000474962 C21orf2O43822 256 aa15.56■□□□□ 0.08
CLIP2-204ENST00000474962 RIPK4P57078 832 aa15.56■□□□□ 0.08
CLIP2-204ENST00000474962 NBPF5PQ86XG9 351 aaPredicted RBP15.56■□□□□ 0.08
CLIP2-204ENST00000474962 RRP7AQ9Y3A4 280 aaKnown RBP15.56■□□□□ 0.08
CLIP2-204ENST00000474962 MAPK8IP3Q9UPT6 1336 aa15.56■□□□□ 0.08
CLIP2-204ENST00000474962 ARFGEF1Q9Y6D6 1849 aa15.56■□□□□ 0.08
CLIP2-204ENST00000474962 FAM177BA6PVY3 158 aa15.55■□□□□ 0.08
CLIP2-204ENST00000474962 HSPA6P17066 643 aa15.55■□□□□ 0.08
CLIP2-204ENST00000474962 RRAGCQ9HB90 399 aa15.55■□□□□ 0.08
CLIP2-204ENST00000474962 TOMM70O94826 608 aa15.54■□□□□ 0.08
CLIP2-204ENST00000474962 SRGNP10124 158 aa15.54■□□□□ 0.08
CLIP2-204ENST00000474962 LMNB1P20700 586 aa15.54■□□□□ 0.08
CLIP2-204ENST00000474962 ST5P78524 1137 aa15.54■□□□□ 0.08
CLIP2-204ENST00000474962 PDZRN3Q9UPQ7 1066 aa15.54■□□□□ 0.08
CLIP2-204ENST00000474962 NIP7Q9Y221 180 aaKnown RBP eCLIP15.54■□□□□ 0.08
CLIP2-204ENST00000474962 ZNF652Q9Y2D9 606 aa15.54■□□□□ 0.08
CLIP2-204ENST00000474962 CCER2I3L3R5 266 aa15.53■□□□□ 0.08
CLIP2-204ENST00000474962 NFKBIEO00221 500 aa15.53■□□□□ 0.08
CLIP2-204ENST00000474962 MYL6BP14649 208 aa15.53■□□□□ 0.08
CLIP2-204ENST00000474962 TMPOP42166 694 aaKnown RBP15.53■□□□□ 0.08
CLIP2-204ENST00000474962 NEUROD2Q15784 382 aa15.53■□□□□ 0.08
CLIP2-204ENST00000474962 TPTE2Q6XPS3 522 aa15.53■□□□□ 0.08
CLIP2-204ENST00000474962 CCDC146Q8IYE0 955 aa15.53■□□□□ 0.08
CLIP2-204ENST00000474962 CCDC184Q52MB2 194 aa15.52■□□□□ 0.08
CLIP2-204ENST00000474962 TTLL7Q6ZT98 887 aa15.52■□□□□ 0.08
CLIP2-204ENST00000474962 MIER1Q8N108 512 aa15.52■□□□□ 0.08
CLIP2-204ENST00000474962 TSPYL4Q9UJ04 414 aa15.52■□□□□ 0.08
CLIP2-204ENST00000474962 DLG5Q8TDM6 1919 aa15.52■□□□□ 0.07
CLIP2-204ENST00000474962 KDM2BQ8NHM5 1336 aa15.51■□□□□ 0.07
CLIP2-204ENST00000474962 SBF1O95248 1867 aa15.51■□□□□ 0.07
CLIP2-204ENST00000474962 STYK1Q6J9G0 422 aa15.51■□□□□ 0.07
CLIP2-204ENST00000474962 CNKSR1Q969H4 720 aa15.51■□□□□ 0.07
CLIP2-204ENST00000474962 MASTLQ96GX5 879 aa15.51■□□□□ 0.07
CLIP2-204ENST00000474962 ANKRD31Q8N7Z5 1873 aa15.5■□□□□ 0.07
CLIP2-204ENST00000474962 EIF2S2P20042 333 aaKnown RBP15.5■□□□□ 0.07
CLIP2-204ENST00000474962 PRPF40BQ6NWY9 871 aaKnown RBP15.5■□□□□ 0.07
CLIP2-204ENST00000474962 FAM9BQ8IZU0 186 aa15.5■□□□□ 0.07
CLIP2-204ENST00000474962 ADAMTS8Q9UP79 889 aa15.5■□□□□ 0.07
CLIP2-204ENST00000474962 SCN7AQ01118 1682 aa15.5■□□□□ 0.07
CLIP2-204ENST00000474962 KLRG2A4D1S0 409 aaPredicted RBP15.49■□□□□ 0.07
CLIP2-204ENST00000474962 ERVV-1B6SEH8 477 aa15.49■□□□□ 0.07
CLIP2-204ENST00000474962 RGL2O15211 777 aa15.49■□□□□ 0.07
CLIP2-204ENST00000474962 C16orf71Q8IYS4 520 aaPredicted RBP15.49■□□□□ 0.07
CLIP2-204ENST00000474962 GLTPD2A6NH11 291 aa15.48■□□□□ 0.07
CLIP2-204ENST00000474962 GTF2E1P29083 439 aaPredicted RBP15.48■□□□□ 0.07
CLIP2-204ENST00000474962 PDIA6Q15084 440 aa15.48■□□□□ 0.07
CLIP2-204ENST00000474962 NUTM1Q86Y26 1132 aa15.48■□□□□ 0.07
CLIP2-204ENST00000474962 C7orf43Q8WVR3 580 aa15.48■□□□□ 0.07
CLIP2-204ENST00000474962 ZBTB3Q9H5J0 574 aa15.48■□□□□ 0.07
CLIP2-204ENST00000474962 MAP3K15Q6ZN16 1313 aa15.47■□□□□ 0.07
CLIP2-204ENST00000474962 NPR1P16066 1061 aa15.47■□□□□ 0.07
CLIP2-204ENST00000474962 GPTP24298 496 aa15.47■□□□□ 0.07
CLIP2-204ENST00000474962 ERFEQ4G0M1 354 aa15.47■□□□□ 0.07
CLIP2-204ENST00000474962 OLFM4Q6UX06 510 aa15.47■□□□□ 0.07
CLIP2-204ENST00000474962 KIF6Q6ZMV9 814 aa15.47■□□□□ 0.07
CLIP2-204ENST00000474962 RBM46Q8TBY0 533 aaKnown RBP15.47■□□□□ 0.07
CLIP2-204ENST00000474962 NECTIN2Q92692 538 aa15.47■□□□□ 0.07
CLIP2-204ENST00000474962 RUNDC1Q96C34 613 aa15.47■□□□□ 0.07
CLIP2-204ENST00000474962 TRIM35Q9UPQ4 493 aa15.47■□□□□ 0.07
CLIP2-204ENST00000474962 PCNTO95613 3336 aa15.47■□□□□ 0.07
CLIP2-204ENST00000474962 DLEC1Q9Y238 1755 aa15.47■□□□□ 0.07
CLIP2-204ENST00000474962 SLX4Q8IY92 1834 aa15.46■□□□□ 0.07
CLIP2-204ENST00000474962 ANXA1P04083 346 aa15.46■□□□□ 0.07
CLIP2-204ENST00000474962 PROSER3Q2NL68 480 aa15.46■□□□□ 0.07
CLIP2-204ENST00000474962 LRP10Q7Z4F1 713 aa15.46■□□□□ 0.07
CLIP2-204ENST00000474962 BABAM1Q9NWV8 329 aa15.46■□□□□ 0.07
CLIP2-204ENST00000474962 LAS1LQ9Y4W2 734 aaKnown RBP15.46■□□□□ 0.07
CLIP2-204ENST00000474962 BCORQ6W2J9 1755 aa15.45■□□□□ 0.06
CLIP2-204ENST00000474962 POTECB2RU33 542 aa15.45■□□□□ 0.06
CLIP2-204ENST00000474962 CHL1O00533 1208 aa15.45■□□□□ 0.06
CLIP2-204ENST00000474962 APLP1P51693 650 aa15.45■□□□□ 0.06
CLIP2-204ENST00000474962 LMOD3Q0VAK6 560 aa15.45■□□□□ 0.06
CLIP2-204ENST00000474962 KRT24Q2M2I5 525 aa15.45■□□□□ 0.06
CLIP2-204ENST00000474962 SUSD4Q5VX71 490 aa15.45■□□□□ 0.06
CLIP2-204ENST00000474962 TAOK3Q9H2K8 898 aa15.45■□□□□ 0.06
CLIP2-204ENST00000474962 ZC3H4Q9UPT8 1303 aaKnown RBP15.44■□□□□ 0.06
CLIP2-204ENST00000474962 KDM3BQ7LBC6 1761 aa15.44■□□□□ 0.06
CLIP2-204ENST00000474962 COL11A2P13942 1736 aaPredicted RBP15.44■□□□□ 0.06
CLIP2-204ENST00000474962 VEGFAP15692 232 aaPredicted RBP15.44■□□□□ 0.06
CLIP2-204ENST00000474962 HTRA3P83110 453 aa15.44■□□□□ 0.06
CLIP2-204ENST00000474962 ZNF34Q8IZ26 560 aa15.44■□□□□ 0.06
CLIP2-204ENST00000474962 DNAJC5GQ8N7S2 189 aa15.44■□□□□ 0.06
CLIP2-204ENST00000474962 UBN2Q6ZU65 1347 aa15.43■□□□□ 0.06
CLIP2-204ENST00000474962 DPY19L2Q6NUT2 758 aa15.43■□□□□ 0.06
CLIP2-204ENST00000474962 GIGYF2Q6Y7W6 1299 aaKnown RBP15.43■□□□□ 0.06
CLIP2-204ENST00000474962 NYXQ9GZU5 481 aa15.43■□□□□ 0.06
CLIP2-204ENST00000474962 CCDC88AQ3V6T2 1871 aa15.43■□□□□ 0.06
CLIP2-204ENST00000474962 LTBP3Q9NS15 1303 aa15.43■□□□□ 0.06
CLIP2-204ENST00000474962 ZBTB22O15209 634 aa15.42■□□□□ 0.06
CLIP2-204ENST00000474962 ALDH1B1P30837 517 aa15.42■□□□□ 0.06
CLIP2-204ENST00000474962 FSTL1Q12841 308 aa15.42■□□□□ 0.06
CLIP2-204ENST00000474962 AIMP1Q12904 312 aaKnown RBP15.42■□□□□ 0.06
CLIP2-204ENST00000474962 SOGA3Q5TF21 947 aa15.42■□□□□ 0.06
CLIP2-204ENST00000474962 COPS6Q7L5N1 327 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms