RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 NFIXQ14938 502 aa21.87■■□□□ 1.09
SCAF11-206ENST00000474828 CCDC30Q5VVM6 783 aa21.87■■□□□ 1.09
SCAF11-206ENST00000474828 TTLL7Q6ZT98 887 aa21.87■■□□□ 1.09
SCAF11-206ENST00000474828 NPM2Q86SE8 214 aaKnown RBP21.87■■□□□ 1.09
SCAF11-206ENST00000474828 POLRMTO00411 1230 aaKnown RBP21.86■■□□□ 1.09
SCAF11-206ENST00000474828 CDCA7LQ96GN5 454 aa21.86■■□□□ 1.09
SCAF11-206ENST00000474828 ATP10DQ9P241 1426 aa21.86■■□□□ 1.09
SCAF11-206ENST00000474828 ANXA1P04083 346 aa21.85■■□□□ 1.09
SCAF11-206ENST00000474828 NECTIN2Q92692 538 aa21.85■■□□□ 1.09
SCAF11-206ENST00000474828 ZBED9Q6R2W3 1325 aa21.84■■□□□ 1.09
SCAF11-206ENST00000474828 HNRNPUQ00839 825 aaKnown RBP eCLIP21.84■■□□□ 1.09
SCAF11-206ENST00000474828 TBC1D9BQ66K14 1250 aa21.84■■□□□ 1.09
SCAF11-206ENST00000474828 COPS6Q7L5N1 327 aa21.84■■□□□ 1.09
SCAF11-206ENST00000474828 ZNF652Q9Y2D9 606 aa21.84■■□□□ 1.09
SCAF11-206ENST00000474828 ZNF330Q9Y3S2 320 aaPredicted RBP21.84■■□□□ 1.09
SCAF11-206ENST00000474828 CD2APQ9Y5K6 639 aa21.84■■□□□ 1.09
SCAF11-206ENST00000474828 KIF13BQ9NQT8 1826 aa21.84■■□□□ 1.09
SCAF11-206ENST00000474828 C10orf71Q711Q0 1435 aa21.83■■□□□ 1.09
SCAF11-206ENST00000474828 DCAF8L1A6NGE4 600 aa21.83■■□□□ 1.09
SCAF11-206ENST00000474828 HLFQ16534 295 aa21.83■■□□□ 1.09
SCAF11-206ENST00000474828 GIGYF2Q6Y7W6 1299 aaKnown RBP21.83■■□□□ 1.09
SCAF11-206ENST00000474828 XAGE3Q8WTP9 111 aa21.83■■□□□ 1.09
SCAF11-206ENST00000474828 KIF6Q6ZMV9 814 aa21.82■■□□□ 1.08
SCAF11-206ENST00000474828 ZNF428Q96B54 188 aa21.82■■□□□ 1.08
SCAF11-206ENST00000474828 FHDC1Q9C0D6 1143 aaPredicted RBP21.82■■□□□ 1.08
SCAF11-206ENST00000474828 CT47B1P0C2W7 299 aaPredicted RBP21.81■■□□□ 1.08
SCAF11-206ENST00000474828 ZNF34Q8IZ26 560 aa21.81■■□□□ 1.08
SCAF11-206ENST00000474828 SYT17Q9BSW7 474 aa21.81■■□□□ 1.08
SCAF11-206ENST00000474828 PARP3Q9Y6F1 533 aa21.81■■□□□ 1.08
SCAF11-206ENST00000474828 CARMIL3Q8ND23 1372 aa21.81■■□□□ 1.08
SCAF11-206ENST00000474828 PLBD2Q8NHP8 589 aa21.8■■□□□ 1.08
SCAF11-206ENST00000474828 NUP98P52948 1817 aa21.8■■□□□ 1.08
SCAF11-206ENST00000474828 IBTKQ9P2D0 1353 aaPredicted RBP21.79■■□□□ 1.08
SCAF11-206ENST00000474828 YY1P25490 414 aa21.79■■□□□ 1.08
SCAF11-206ENST00000474828 PHAXQ9H814 394 aaKnown RBP21.79■■□□□ 1.08
SCAF11-206ENST00000474828 CACNA1FO60840 1977 aa21.79■■□□□ 1.08
SCAF11-206ENST00000474828 AFDNP55196 1824 aaKnown RBP21.78■■□□□ 1.08
SCAF11-206ENST00000474828 SERPINB2P05120 415 aa21.78■■□□□ 1.08
SCAF11-206ENST00000474828 ANKRD13DQ6ZTN6 518 aa21.78■■□□□ 1.08
SCAF11-206ENST00000474828 SETDB2Q96T68 719 aa21.78■■□□□ 1.08
SCAF11-206ENST00000474828 STK31Q9BXU1 1019 aa21.78■■□□□ 1.08
SCAF11-206ENST00000474828 KIAA1551Q9HCM1 1747 aa21.77■■□□□ 1.08
SCAF11-206ENST00000474828 ZBTB3Q9H5J0 574 aa21.77■■□□□ 1.08
SCAF11-206ENST00000474828 SLC4A2P04920 1241 aa21.76■■□□□ 1.07
SCAF11-206ENST00000474828 TRIM28Q13263 835 aaKnown RBP21.76■■□□□ 1.07
SCAF11-206ENST00000474828 TCIRG1Q13488 830 aa21.76■■□□□ 1.07
SCAF11-206ENST00000474828 HSP90AB3PQ58FF7 597 aa21.76■■□□□ 1.07
SCAF11-206ENST00000474828 AIMP1Q12904 312 aaKnown RBP21.75■■□□□ 1.07
SCAF11-206ENST00000474828 NIP7Q9Y221 180 aaKnown RBP eCLIP21.75■■□□□ 1.07
SCAF11-206ENST00000474828 UBN2Q6ZU65 1347 aa21.75■■□□□ 1.07
SCAF11-206ENST00000474828 ANKRD36CQ5JPF3 1778 aa21.74■■□□□ 1.07
SCAF11-206ENST00000474828 TGFB2P61812 414 aa21.74■■□□□ 1.07
SCAF11-206ENST00000474828 PRR5LQ6MZQ0 368 aa21.74■■□□□ 1.07
SCAF11-206ENST00000474828 G2E3Q7L622 706 aa21.74■■□□□ 1.07
SCAF11-206ENST00000474828 ISCA1Q9BUE6 129 aa21.74■■□□□ 1.07
SCAF11-206ENST00000474828 RIC1Q4ADV7 1423 aa21.73■■□□□ 1.07
SCAF11-206ENST00000474828 PXDNLA1KZ92 1463 aa21.73■■□□□ 1.07
SCAF11-206ENST00000474828 BRPF1P55201 1214 aaPredicted RBP21.73■■□□□ 1.07
SCAF11-206ENST00000474828 ALDH1L2Q3SY69 923 aa21.73■■□□□ 1.07
SCAF11-206ENST00000474828 PARP10Q53GL7 1025 aa21.73■■□□□ 1.07
SCAF11-206ENST00000474828 ARFGEF2Q9Y6D5 1785 aa21.73■■□□□ 1.07
SCAF11-206ENST00000474828 ADCY9O60503 1353 aa21.73■■□□□ 1.07
SCAF11-206ENST00000474828 KLRG2A4D1S0 409 aaPredicted RBP21.72■■□□□ 1.07
SCAF11-206ENST00000474828 FLIIQ13045 1269 aa21.72■■□□□ 1.07
SCAF11-206ENST00000474828 KSR2Q6VAB6 950 aa21.72■■□□□ 1.07
SCAF11-206ENST00000474828 BICDL1Q6ZP65 573 aa21.72■■□□□ 1.07
SCAF11-206ENST00000474828 NLGN2Q8NFZ4 835 aa21.72■■□□□ 1.07
SCAF11-206ENST00000474828 RNF123Q5XPI4 1314 aa21.72■■□□□ 1.07
SCAF11-206ENST00000474828 DDX58O95786 925 aaKnown RBP21.71■■□□□ 1.07
SCAF11-206ENST00000474828 BRIP1Q9BX63 1249 aa21.71■■□□□ 1.07
SCAF11-206ENST00000474828 TCERG1O14776 1098 aaKnown RBP21.7■■□□□ 1.06
SCAF11-206ENST00000474828 NTSR2O95665 410 aa21.7■■□□□ 1.06
SCAF11-206ENST00000474828 TPTE2Q6XPS3 522 aa21.7■■□□□ 1.06
SCAF11-206ENST00000474828 NLRP10Q86W26 655 aa21.7■■□□□ 1.06
SCAF11-206ENST00000474828 MRPL50Q8N5N7 158 aaKnown RBP21.7■■□□□ 1.06
SCAF11-206ENST00000474828 KCNA3P22001 575 aa21.69■■□□□ 1.06
SCAF11-206ENST00000474828 SUSD4Q5VX71 490 aa21.69■■□□□ 1.06
SCAF11-206ENST00000474828 NBPF5PQ86XG9 351 aaPredicted RBP21.69■■□□□ 1.06
SCAF11-206ENST00000474828 CNBD1Q8NA66 436 aa21.69■■□□□ 1.06
SCAF11-206ENST00000474828 SSH1Q8WYL5 1049 aa21.69■■□□□ 1.06
SCAF11-206ENST00000474828 METTL22Q9BUU2 404 aaPredicted RBP21.69■■□□□ 1.06
SCAF11-206ENST00000474828 NYXQ9GZU5 481 aa21.69■■□□□ 1.06
SCAF11-206ENST00000474828 PDZRN3Q9UPQ7 1066 aa21.69■■□□□ 1.06
SCAF11-206ENST00000474828 ANKRD31Q8N7Z5 1873 aa21.69■■□□□ 1.06
SCAF11-206ENST00000474828 PI4KAP2A4QPH2 592 aa21.68■■□□□ 1.06
SCAF11-206ENST00000474828 SLC10A5Q5PT55 438 aa21.68■■□□□ 1.06
SCAF11-206ENST00000474828 RIC3Q7Z5B4 369 aa21.68■■□□□ 1.06
SCAF11-206ENST00000474828 PI4KAP1Q8N8J0 262 aa21.68■■□□□ 1.06
SCAF11-206ENST00000474828 GPTP24298 496 aa21.67■■□□□ 1.06
SCAF11-206ENST00000474828 GOLGB1Q14789 3259 aaKnown RBP21.67■■□□□ 1.06
SCAF11-206ENST00000474828 PPP1R42Q7Z4L9 355 aa21.66■■□□□ 1.06
SCAF11-206ENST00000474828 MAP3K2Q9Y2U5 619 aa21.66■■□□□ 1.06
SCAF11-206ENST00000474828 BRCA1P38398 1863 aaKnown RBP21.65■■□□□ 1.06
SCAF11-206ENST00000474828 RARSP54136 660 aaKnown RBP21.65■■□□□ 1.06
SCAF11-206ENST00000474828 CCDC191Q8NCU4 936 aa21.65■■□□□ 1.06
SCAF11-206ENST00000474828 DLEC1Q9Y238 1755 aa21.65■■□□□ 1.06
SCAF11-206ENST00000474828 PTPRCP08575 1304 aa21.64■■□□□ 1.05
SCAF11-206ENST00000474828 IGKV5-2P06315 115 aa21.64■■□□□ 1.05
SCAF11-206ENST00000474828 PDE6BP35913 854 aa21.64■■□□□ 1.05
SCAF11-206ENST00000474828 ST5P78524 1137 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms