RNA–Protein interactions for RNA: ENST00000474766.1

SH3D21-202, Transcript of SH3 domain containing 21, humanhuman

TSL 1 (best)

Gene SH3D21, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-202ENST00000474766 TTC22Q5TAA0 569 aa25.89■■□□□ 1.74
SH3D21-202ENST00000474766 CCDC125Q86Z20 511 aa25.89■■□□□ 1.74
SH3D21-202ENST00000474766 TOGARAM1Q9Y4F4 1720 aa25.88■■□□□ 1.73
SH3D21-202ENST00000474766 PLEKHO1Q53GL0 409 aaPredicted RBP25.88■■□□□ 1.73
SH3D21-202ENST00000474766 MAP3K5Q99683 1374 aa25.88■■□□□ 1.73
SH3D21-202ENST00000474766 AMOTQ4VCS5 1084 aa25.88■■□□□ 1.73
SH3D21-202ENST00000474766 ACSBG1Q96GR2 724 aa25.88■■□□□ 1.73
SH3D21-202ENST00000474766 KCNQ2O43526 872 aa25.87■■□□□ 1.73
SH3D21-202ENST00000474766 BAG4O95429 457 aaKnown RBP25.87■■□□□ 1.73
SH3D21-202ENST00000474766 IL17REQ8NFR9 667 aa25.87■■□□□ 1.73
SH3D21-202ENST00000474766 C16orf71Q8IYS4 520 aaPredicted RBP25.86■■□□□ 1.73
SH3D21-202ENST00000474766 STK31Q9BXU1 1019 aa25.86■■□□□ 1.73
SH3D21-202ENST00000474766 DDX49Q9Y6V7 483 aaKnown RBP25.86■■□□□ 1.73
SH3D21-202ENST00000474766 DEFB132Q7Z7B7 95 aa25.85■■□□□ 1.73
SH3D21-202ENST00000474766 F6X3S4 739 aa25.85■■□□□ 1.73
SH3D21-202ENST00000474766 SSFA2P28290 1259 aa25.85■■□□□ 1.73
SH3D21-202ENST00000474766 CCDC30Q5VVM6 783 aa25.85■■□□□ 1.73
SH3D21-202ENST00000474766 CACNA1FO60840 1977 aa25.84■■□□□ 1.73
SH3D21-202ENST00000474766 ZNF500O60304 480 aaPredicted RBP25.84■■□□□ 1.73
SH3D21-202ENST00000474766 HMMRO75330 724 aa25.84■■□□□ 1.73
SH3D21-202ENST00000474766 PHKG2P15735 406 aa25.84■■□□□ 1.73
SH3D21-202ENST00000474766 SF3B2Q13435 895 aaKnown RBP25.84■■□□□ 1.73
SH3D21-202ENST00000474766 BTAF1O14981 1849 aa25.84■■□□□ 1.73
SH3D21-202ENST00000474766 CD2BP2O95400 341 aaKnown RBP25.83■■□□□ 1.73
SH3D21-202ENST00000474766 NUCB2P80303 420 aa25.83■■□□□ 1.73
SH3D21-202ENST00000474766 ZNF530Q6P9A1 599 aaPredicted RBP25.83■■□□□ 1.73
SH3D21-202ENST00000474766 BCL11BQ9C0K0 894 aaPredicted RBP25.83■■□□□ 1.73
SH3D21-202ENST00000474766 TAF7Q15545 349 aaPredicted RBP25.83■■□□□ 1.73
SH3D21-202ENST00000474766 NOL7Q9UMY1 257 aaKnown RBP25.83■■□□□ 1.73
SH3D21-202ENST00000474766 SLC4A10Q6U841 1118 aa25.82■■□□□ 1.72
SH3D21-202ENST00000474766 OTUD7AQ8TE49 926 aaPredicted RBP25.82■■□□□ 1.72
SH3D21-202ENST00000474766 ITGB4P16144 1822 aa25.82■■□□□ 1.72
SH3D21-202ENST00000474766 FLIIQ13045 1269 aa25.81■■□□□ 1.72
SH3D21-202ENST00000474766 IFNL2Q8IZJ0 200 aa25.81■■□□□ 1.72
SH3D21-202ENST00000474766 NKX1-1Q15270 411 aaPredicted RBP25.81■■□□□ 1.72
SH3D21-202ENST00000474766 PDLIM2Q96JY6 352 aa25.81■■□□□ 1.72
SH3D21-202ENST00000474766 APBA3O96018 575 aa25.8■■□□□ 1.72
SH3D21-202ENST00000474766 MCM5P33992 734 aa25.8■■□□□ 1.72
SH3D21-202ENST00000474766 RABEP1Q15276 862 aa25.8■■□□□ 1.72
SH3D21-202ENST00000474766 SMARCA5O60264 1052 aaPredicted RBP25.79■■□□□ 1.72
SH3D21-202ENST00000474766 GNAI2P04899 355 aa25.79■■□□□ 1.72
SH3D21-202ENST00000474766 PRIM1P49642 420 aaKnown RBP25.79■■□□□ 1.72
SH3D21-202ENST00000474766 AKAP4Q5JQC9 854 aa25.79■■□□□ 1.72
SH3D21-202ENST00000474766 CEMIPQ8WUJ3 1361 aa25.79■■□□□ 1.72
SH3D21-202ENST00000474766 BAG6P46379 1132 aa25.78■■□□□ 1.72
SH3D21-202ENST00000474766 EN1Q05925 392 aaPredicted RBP25.78■■□□□ 1.72
SH3D21-202ENST00000474766 MTERF4Q7Z6M4 381 aaKnown RBP25.78■■□□□ 1.72
SH3D21-202ENST00000474766 N4BP2Q86UW6 1770 aaPredicted RBP25.77■■□□□ 1.72
SH3D21-202ENST00000474766 KDM6AO15550 1401 aaPredicted RBP25.77■■□□□ 1.72
SH3D21-202ENST00000474766 CYP2E1P05181 493 aaPredicted RBP25.77■■□□□ 1.72
SH3D21-202ENST00000474766 SYTL4Q96C24 671 aaPredicted RBP25.77■■□□□ 1.72
SH3D21-202ENST00000474766 OSBPL3Q9H4L5 887 aa25.77■■□□□ 1.72
SH3D21-202ENST00000474766 RGPD3A6NKT7 1758 aaPredicted RBP25.77■■□□□ 1.72
SH3D21-202ENST00000474766 RGPD4Q7Z3J3 1758 aa25.77■■□□□ 1.72
SH3D21-202ENST00000474766 SDSP20132 328 aa25.76■■□□□ 1.72
SH3D21-202ENST00000474766 FKBP5Q13451 457 aaPredicted RBP25.76■■□□□ 1.72
SH3D21-202ENST00000474766 C1orf141Q5JVX7 400 aa25.76■■□□□ 1.72
SH3D21-202ENST00000474766 GNAI3P08754 354 aa25.76■■□□□ 1.71
SH3D21-202ENST00000474766 CSPP1Q1MSJ5 1256 aa25.76■■□□□ 1.71
SH3D21-202ENST00000474766 CWC22Q9HCG8 908 aaKnown RBP25.76■■□□□ 1.71
SH3D21-202ENST00000474766 SCN11AQ9UI33 1791 aa25.76■■□□□ 1.71
SH3D21-202ENST00000474766 PXDNLA1KZ92 1463 aa25.75■■□□□ 1.71
SH3D21-202ENST00000474766 FOXD4L1Q9NU39 408 aa25.75■■□□□ 1.71
SH3D21-202ENST00000474766 ZSCAN23Q3MJ62 389 aa25.75■■□□□ 1.71
SH3D21-202ENST00000474766 MPRIPQ6WCQ1 1025 aa25.75■■□□□ 1.71
SH3D21-202ENST00000474766 RREB1Q92766 1687 aa25.74■■□□□ 1.71
SH3D21-202ENST00000474766 CAMKK2Q96RR4 588 aa25.74■■□□□ 1.71
SH3D21-202ENST00000474766 USP26Q9BXU7 913 aa25.74■■□□□ 1.71
SH3D21-202ENST00000474766 LGR6Q9HBX8 967 aa25.74■■□□□ 1.71
SH3D21-202ENST00000474766 APBB1O00213 710 aa25.73■■□□□ 1.71
SH3D21-202ENST00000474766 EZH2Q15910 746 aaKnown RBP25.73■■□□□ 1.71
SH3D21-202ENST00000474766 RBM42Q9BTD8 480 aaKnown RBP25.73■■□□□ 1.71
SH3D21-202ENST00000474766 LMBRD1Q9NUN5 540 aa25.73■■□□□ 1.71
SH3D21-202ENST00000474766 ADAMTS7Q9UKP4 1686 aa25.73■■□□□ 1.71
SH3D21-202ENST00000474766 DCAF5Q96JK2 942 aa25.72■■□□□ 1.71
SH3D21-202ENST00000474766 ATP8B2P98198 1209 aa25.71■■□□□ 1.71
SH3D21-202ENST00000474766 NECTIN2Q92692 538 aa25.71■■□□□ 1.71
SH3D21-202ENST00000474766 PLSCR1O15162 318 aa25.7■■□□□ 1.7
SH3D21-202ENST00000474766 PDE1AP54750 535 aa25.7■■□□□ 1.7
SH3D21-202ENST00000474766 CASC1Q6TDU7 716 aa25.7■■□□□ 1.7
SH3D21-202ENST00000474766 NUP188Q5SRE5 1749 aa25.7■■□□□ 1.7
SH3D21-202ENST00000474766 RNMTO43148 476 aaKnown RBP25.7■■□□□ 1.7
SH3D21-202ENST00000474766 MCTP1Q6DN14 999 aa25.7■■□□□ 1.7
SH3D21-202ENST00000474766 ZKSCAN5Q9Y2L8 839 aa25.7■■□□□ 1.7
SH3D21-202ENST00000474766 SALL3Q9BXA9 1300 aa25.69■■□□□ 1.7
SH3D21-202ENST00000474766 DYNC1I1O14576 645 aa25.68■■□□□ 1.7
SH3D21-202ENST00000474766 HDGFL1Q5TGJ6 251 aa25.68■■□□□ 1.7
SH3D21-202ENST00000474766 CAVIN1Q6NZI2 390 aaKnown RBP25.68■■□□□ 1.7
SH3D21-202ENST00000474766 R3HCC1Q9Y3T6 440 aaKnown RBP25.68■■□□□ 1.7
SH3D21-202ENST00000474766 HOXB7P09629 217 aa25.68■■□□□ 1.7
SH3D21-202ENST00000474766 PIGBQ92521 554 aa25.68■■□□□ 1.7
SH3D21-202ENST00000474766 RBSNQ9H1K0 784 aa25.68■■□□□ 1.7
SH3D21-202ENST00000474766 EIF2AK3Q9NZJ5 1116 aaKnown RBP25.68■■□□□ 1.7
SH3D21-202ENST00000474766 LY75O60449 1722 aa25.67■■□□□ 1.7
SH3D21-202ENST00000474766 PNMA6EA0A0J9YXQ4 647 aa25.67■■□□□ 1.7
SH3D21-202ENST00000474766 EIF4A1P60842 406 aaKnown RBP25.67■■□□□ 1.7
SH3D21-202ENST00000474766 USP44Q9H0E7 712 aa25.67■■□□□ 1.7
SH3D21-202ENST00000474766 EXOC6BQ9Y2D4 811 aa25.67■■□□□ 1.7
SH3D21-202ENST00000474766 KDM3BQ7LBC6 1761 aa25.67■■□□□ 1.7
SH3D21-202ENST00000474766 PROM2Q8N271 834 aa25.66■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms