RNA–Protein interactions for RNA: ENST00000474743.5

SH3D19-206, Transcript of SH3 domain containing 19, humanhuman

TSL 4

Gene SH3D19, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-206ENST00000474743 FMNL2Q96PY5 1086 aa11.15□□□□□ -0.62
SH3D19-206ENST00000474743 CD2APQ9Y5K6 639 aa11.15□□□□□ -0.62
SH3D19-206ENST00000474743 COL15A1P39059 1388 aa11.15□□□□□ -0.63
SH3D19-206ENST00000474743 HEG1Q9ULI3 1381 aa11.15□□□□□ -0.63
SH3D19-206ENST00000474743 SCN7AQ01118 1682 aa11.14□□□□□ -0.63
SH3D19-206ENST00000474743 BTBD11A6QL63 1104 aa11.14□□□□□ -0.63
SH3D19-206ENST00000474743 MMP10P09238 476 aa11.14□□□□□ -0.63
SH3D19-206ENST00000474743 WDR43Q15061 677 aaKnown RBP eCLIP11.14□□□□□ -0.63
SH3D19-206ENST00000474743 GPR162Q16538 588 aa11.14□□□□□ -0.63
SH3D19-206ENST00000474743 NPM2Q86SE8 214 aaKnown RBP11.14□□□□□ -0.63
SH3D19-206ENST00000474743 ARHGEF1Q92888 912 aaKnown RBP11.14□□□□□ -0.63
SH3D19-206ENST00000474743 TEX13AQ9BXU3 409 aaPredicted RBP11.14□□□□□ -0.63
SH3D19-206ENST00000474743 SOS1Q07889 1333 aaPredicted RBP11.13□□□□□ -0.63
SH3D19-206ENST00000474743 USP42Q9H9J4 1324 aaKnown RBP11.13□□□□□ -0.63
SH3D19-206ENST00000474743 GOLGB1Q14789 3259 aaKnown RBP11.13□□□□□ -0.63
SH3D19-206ENST00000474743 ZPR1O75312 459 aa11.13□□□□□ -0.63
SH3D19-206ENST00000474743 CYP19A1P11511 503 aaPredicted RBP11.13□□□□□ -0.63
SH3D19-206ENST00000474743 SMIM5Q71RC9 77 aa11.13□□□□□ -0.63
SH3D19-206ENST00000474743 MCM10Q7L590 875 aa11.13□□□□□ -0.63
SH3D19-206ENST00000474743 KDM3BQ7LBC6 1761 aa11.13□□□□□ -0.63
SH3D19-206ENST00000474743 C10orf71Q711Q0 1435 aa11.12□□□□□ -0.63
SH3D19-206ENST00000474743 GYS1P13807 737 aa11.12□□□□□ -0.63
SH3D19-206ENST00000474743 YY1P25490 414 aa11.12□□□□□ -0.63
SH3D19-206ENST00000474743 LMOD3Q0VAK6 560 aa11.12□□□□□ -0.63
SH3D19-206ENST00000474743 NFE2L2Q16236 605 aa11.12□□□□□ -0.63
SH3D19-206ENST00000474743 INTS5Q6P9B9 1019 aaKnown RBP11.12□□□□□ -0.63
SH3D19-206ENST00000474743 NLGN2Q8NFZ4 835 aa11.12□□□□□ -0.63
SH3D19-206ENST00000474743 ZNF496Q96IT1 587 aaPredicted RBP11.12□□□□□ -0.63
SH3D19-206ENST00000474743 PARP3Q9Y6F1 533 aa11.12□□□□□ -0.63
SH3D19-206ENST00000474743 UTRNP46939 3433 aa11.12□□□□□ -0.63
SH3D19-206ENST00000474743 A0A087WZG4 1122 aa11.11□□□□□ -0.63
SH3D19-206ENST00000474743 PNISRQ8TF01 805 aaKnown RBP11.11□□□□□ -0.63
SH3D19-206ENST00000474743 ZBTB1Q9Y2K1 713 aa11.11□□□□□ -0.63
SH3D19-206ENST00000474743 BCORQ6W2J9 1755 aa11.11□□□□□ -0.63
SH3D19-206ENST00000474743 GRIN3BO60391 1043 aa11.1□□□□□ -0.63
SH3D19-206ENST00000474743 CANXP27824 592 aaKnown RBP11.1□□□□□ -0.63
SH3D19-206ENST00000474743 PLEKHF1Q96S99 279 aa11.1□□□□□ -0.63
SH3D19-206ENST00000474743 PRKRIP1Q9H875 184 aaPredicted RBP11.1□□□□□ -0.63
SH3D19-206ENST00000474743 ZNF330Q9Y3S2 320 aaPredicted RBP11.1□□□□□ -0.63
SH3D19-206ENST00000474743 DCTN1Q14203 1278 aa11.09□□□□□ -0.63
SH3D19-206ENST00000474743 TAF7Q15545 349 aaPredicted RBP11.09□□□□□ -0.63
SH3D19-206ENST00000474743 PDCD7Q8N8D1 485 aaKnown RBP11.09□□□□□ -0.63
SH3D19-206ENST00000474743 SRP68Q9UHB9 627 aaKnown RBP11.09□□□□□ -0.63
SH3D19-206ENST00000474743 N4BP2Q86UW6 1770 aaPredicted RBP11.08□□□□□ -0.64
SH3D19-206ENST00000474743 PXDNLA1KZ92 1463 aa11.08□□□□□ -0.64
SH3D19-206ENST00000474743 SNRPA1P09661 255 aaKnown RBP11.08□□□□□ -0.64
SH3D19-206ENST00000474743 IL6STP40189 918 aaPredicted RBP11.08□□□□□ -0.64
SH3D19-206ENST00000474743 USPL1Q5W0Q7 1092 aa11.08□□□□□ -0.64
SH3D19-206ENST00000474743 NARFQ9UHQ1 456 aa11.08□□□□□ -0.64
SH3D19-206ENST00000474743 KIAA1551Q9HCM1 1747 aa11.08□□□□□ -0.64
SH3D19-206ENST00000474743 BRCA1P38398 1863 aaKnown RBP11.08□□□□□ -0.64
SH3D19-206ENST00000474743 AFDNP55196 1824 aaKnown RBP11.07□□□□□ -0.64
SH3D19-206ENST00000474743 ZNF316A6NFI3 1004 aaPredicted RBP11.07□□□□□ -0.64
SH3D19-206ENST00000474743 TGFB2P61812 414 aa11.07□□□□□ -0.64
SH3D19-206ENST00000474743 NRXN2Q9P2S2 1712 aa11.06□□□□□ -0.64
SH3D19-206ENST00000474743 HOXB1P14653 301 aaPredicted RBP11.06□□□□□ -0.64
SH3D19-206ENST00000474743 EIF5P55010 431 aaKnown RBP11.06□□□□□ -0.64
SH3D19-206ENST00000474743 RIPK4P57078 832 aa11.06□□□□□ -0.64
SH3D19-206ENST00000474743 RUNDC1Q96C34 613 aa11.06□□□□□ -0.64
SH3D19-206ENST00000474743 FBXO3Q9UK99 471 aa11.06□□□□□ -0.64
SH3D19-206ENST00000474743 DLEC1Q9Y238 1755 aa11.05□□□□□ -0.64
SH3D19-206ENST00000474743 CARMIL3Q8ND23 1372 aa11.05□□□□□ -0.64
SH3D19-206ENST00000474743 ARFGEF1Q9Y6D6 1849 aa11.05□□□□□ -0.64
SH3D19-206ENST00000474743 KCNQ3O43525 872 aa11.05□□□□□ -0.64
SH3D19-206ENST00000474743 TMPOP42166 694 aaKnown RBP11.05□□□□□ -0.64
SH3D19-206ENST00000474743 NUBP1P53384 320 aa11.05□□□□□ -0.64
SH3D19-206ENST00000474743 FAM212AQ96EL1 285 aa11.05□□□□□ -0.64
SH3D19-206ENST00000474743 TSPYL4Q9UJ04 414 aa11.05□□□□□ -0.64
SH3D19-206ENST00000474743 ZNF652Q9Y2D9 606 aa11.05□□□□□ -0.64
SH3D19-206ENST00000474743 POLRMTO00411 1230 aaKnown RBP11.04□□□□□ -0.64
SH3D19-206ENST00000474743 NPHP1O15259 732 aa11.04□□□□□ -0.64
SH3D19-206ENST00000474743 ANP32CO43423 234 aa11.04□□□□□ -0.64
SH3D19-206ENST00000474743 YBX3P16989 372 aaKnown RBP eCLIP11.04□□□□□ -0.64
SH3D19-206ENST00000474743 DDR1Q08345 913 aa11.04□□□□□ -0.64
SH3D19-206ENST00000474743 DZIP3Q86Y13 1208 aaKnown RBP11.04□□□□□ -0.64
SH3D19-206ENST00000474743 CCDC146Q8IYE0 955 aa11.04□□□□□ -0.64
SH3D19-206ENST00000474743 THUMPD2Q9BTF0 503 aaKnown RBP11.04□□□□□ -0.64
SH3D19-206ENST00000474743 A1BGP04217 495 aa11.03□□□□□ -0.64
SH3D19-206ENST00000474743 NFIXQ14938 502 aa11.03□□□□□ -0.64
SH3D19-206ENST00000474743 BABAM1Q9NWV8 329 aa11.03□□□□□ -0.64
SH3D19-206ENST00000474743 ZBTB47Q9UFB7 747 aaPredicted RBP11.03□□□□□ -0.64
SH3D19-206ENST00000474743 CALD1Q05682 793 aaKnown RBP11.02□□□□□ -0.65
SH3D19-206ENST00000474743 NEUROD2Q15784 382 aa11.02□□□□□ -0.65
SH3D19-206ENST00000474743 MIS18AQ9NYP9 233 aa11.02□□□□□ -0.65
SH3D19-206ENST00000474743 WWC3Q9ULE0 1092 aa11.02□□□□□ -0.65
SH3D19-206ENST00000474743 ADAMTS8Q9UP79 889 aa11.02□□□□□ -0.65
SH3D19-206ENST00000474743 TBC1D2BQ9UPU7 963 aa11.02□□□□□ -0.65
SH3D19-206ENST00000474743 RRP7AQ9Y3A4 280 aaKnown RBP11.02□□□□□ -0.65
SH3D19-206ENST00000474743 USP16Q9Y5T5 823 aa11.02□□□□□ -0.65
SH3D19-206ENST00000474743 ERBB4Q15303 1308 aa11.02□□□□□ -0.65
SH3D19-206ENST00000474743 A0A0G2JLW4 131 aa11.01□□□□□ -0.65
SH3D19-206ENST00000474743 PRAMEF22A3QJZ6 481 aa11.01□□□□□ -0.65
SH3D19-206ENST00000474743 RGL2O15211 777 aa11.01□□□□□ -0.65
SH3D19-206ENST00000474743 GIGYF1O75420 1035 aaPredicted RBP11.01□□□□□ -0.65
SH3D19-206ENST00000474743 SERPINB2P05120 415 aa11.01□□□□□ -0.65
SH3D19-206ENST00000474743 HOXB3P14651 431 aaPredicted RBP11.01□□□□□ -0.65
SH3D19-206ENST00000474743 TM4SF1P30408 202 aa11.01□□□□□ -0.65
SH3D19-206ENST00000474743 EIF4A1P60842 406 aaKnown RBP11.01□□□□□ -0.65
SH3D19-206ENST00000474743 KIF6Q6ZMV9 814 aa11.01□□□□□ -0.65
SH3D19-206ENST00000474743 BICDL1Q6ZP65 573 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms