RNA–Protein interactions for RNA: ENST00000474648.5

COL8A1-206, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 5

Gene COL8A1, Length 841 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-206ENST00000474648 GNPATO15228 680 aa12.78□□□□□ -0.36
COL8A1-206ENST00000474648 RRP1P56182 461 aaKnown RBP12.78□□□□□ -0.36
COL8A1-206ENST00000474648 AIMP1Q12904 312 aaKnown RBP12.78□□□□□ -0.36
COL8A1-206ENST00000474648 FRAT1Q92837 279 aaPredicted RBP12.78□□□□□ -0.36
COL8A1-206ENST00000474648 IPO8O15397 1037 aaKnown RBP12.77□□□□□ -0.37
COL8A1-206ENST00000474648 ZKSCAN2Q63HK3 967 aa12.77□□□□□ -0.37
COL8A1-206ENST00000474648 ATF7IPQ6VMQ6 1270 aa12.77□□□□□ -0.37
COL8A1-206ENST00000474648 ANKRD13DQ6ZTN6 518 aa12.77□□□□□ -0.37
COL8A1-206ENST00000474648 AK7Q96M32 723 aa12.77□□□□□ -0.37
COL8A1-206ENST00000474648 ANO8Q9HCE9 1232 aaPredicted RBP12.77□□□□□ -0.37
COL8A1-206ENST00000474648 RTCBQ9Y3I0 505 aaKnown RBP12.77□□□□□ -0.37
COL8A1-206ENST00000474648 PTPRCP08575 1304 aa12.77□□□□□ -0.37
COL8A1-206ENST00000474648 KIF16BQ96L93 1317 aa12.77□□□□□ -0.37
COL8A1-206ENST00000474648 PI4KAP2A4QPH2 592 aa12.76□□□□□ -0.37
COL8A1-206ENST00000474648 TRIM27P14373 513 aa12.76□□□□□ -0.37
COL8A1-206ENST00000474648 FKBP5Q13451 457 aaPredicted RBP12.76□□□□□ -0.37
COL8A1-206ENST00000474648 KSR2Q6VAB6 950 aa12.76□□□□□ -0.37
COL8A1-206ENST00000474648 PIP4P2Q8N4L2 257 aa12.76□□□□□ -0.37
COL8A1-206ENST00000474648 PI4KAP1Q8N8J0 262 aa12.76□□□□□ -0.37
COL8A1-206ENST00000474648 ARHGEF1Q92888 912 aaKnown RBP12.76□□□□□ -0.37
COL8A1-206ENST00000474648 API5Q9BZZ5 524 aaKnown RBP12.76□□□□□ -0.37
COL8A1-206ENST00000474648 TBC1D2BQ9UPU7 963 aa12.76□□□□□ -0.37
COL8A1-206ENST00000474648 A0A087WZG4 1122 aa12.75□□□□□ -0.37
COL8A1-206ENST00000474648 LAMB4A4D0S4 1761 aa12.75□□□□□ -0.37
COL8A1-206ENST00000474648 F6X3S4 739 aa12.75□□□□□ -0.37
COL8A1-206ENST00000474648 ADCY9O60503 1353 aa12.75□□□□□ -0.37
COL8A1-206ENST00000474648 RLBP1P12271 317 aa12.75□□□□□ -0.37
COL8A1-206ENST00000474648 COL5A3P25940 1745 aaPredicted RBP12.75□□□□□ -0.37
COL8A1-206ENST00000474648 FXR2P51116 673 aaKnown RBP eCLIP12.75□□□□□ -0.37
COL8A1-206ENST00000474648 SLC15A2Q16348 729 aa12.75□□□□□ -0.37
COL8A1-206ENST00000474648 TRAPPC3LQ5T215 181 aa12.75□□□□□ -0.37
COL8A1-206ENST00000474648 C20orf194Q5TEA3 1177 aa12.75□□□□□ -0.37
COL8A1-206ENST00000474648 MYH14Q7Z406 1995 aaKnown RBP12.75□□□□□ -0.37
COL8A1-206ENST00000474648 DZIP3Q86Y13 1208 aaKnown RBP12.75□□□□□ -0.37
COL8A1-206ENST00000474648 PLBD2Q8NHP8 589 aa12.75□□□□□ -0.37
COL8A1-206ENST00000474648 RREB1Q92766 1687 aa12.75□□□□□ -0.37
COL8A1-206ENST00000474648 ZNF330Q9Y3S2 320 aaPredicted RBP12.75□□□□□ -0.37
COL8A1-206ENST00000474648 RGPD3A6NKT7 1758 aaPredicted RBP12.74□□□□□ -0.37
COL8A1-206ENST00000474648 RGPD4Q7Z3J3 1758 aa12.74□□□□□ -0.37
COL8A1-206ENST00000474648 C4BP0C0L5 1744 aa12.74□□□□□ -0.37
COL8A1-206ENST00000474648 MAP3K15Q6ZN16 1313 aa12.74□□□□□ -0.37
COL8A1-206ENST00000474648 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.74□□□□□ -0.37
COL8A1-206ENST00000474648 ERVV-1B6SEH8 477 aa12.74□□□□□ -0.37
COL8A1-206ENST00000474648 CAMTA2O94983 1202 aa12.74□□□□□ -0.37
COL8A1-206ENST00000474648 SSFA2P28290 1259 aa12.74□□□□□ -0.37
COL8A1-206ENST00000474648 HLFQ16534 295 aa12.74□□□□□ -0.37
COL8A1-206ENST00000474648 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.74□□□□□ -0.37
COL8A1-206ENST00000474648 TFCP2L1Q9NZI6 479 aa12.74□□□□□ -0.37
COL8A1-206ENST00000474648 MAP3K2Q9Y2U5 619 aa12.74□□□□□ -0.37
COL8A1-206ENST00000474648 COL15A1P39059 1388 aa12.73□□□□□ -0.37
COL8A1-206ENST00000474648 ABCC4O15439 1325 aa12.73□□□□□ -0.37
COL8A1-206ENST00000474648 PHF14O94880 888 aa12.73□□□□□ -0.37
COL8A1-206ENST00000474648 DDX58O95786 925 aaKnown RBP12.73□□□□□ -0.37
COL8A1-206ENST00000474648 PDE3AQ14432 1141 aa12.73□□□□□ -0.37
COL8A1-206ENST00000474648 RIC3Q7Z5B4 369 aa12.73□□□□□ -0.37
COL8A1-206ENST00000474648 COL23A1Q86Y22 540 aaPredicted RBP12.73□□□□□ -0.37
COL8A1-206ENST00000474648 DZIP1LQ8IYY4 767 aaKnown RBP12.73□□□□□ -0.37
COL8A1-206ENST00000474648 PANK1Q8TE04 598 aa12.73□□□□□ -0.37
COL8A1-206ENST00000474648 DNAAF4Q8WXU2 420 aa12.73□□□□□ -0.37
COL8A1-206ENST00000474648 CLUAP1Q96AJ1 413 aa12.73□□□□□ -0.37
COL8A1-206ENST00000474648 ZBTB3Q9H5J0 574 aa12.73□□□□□ -0.37
COL8A1-206ENST00000474648 BCL2L12Q9HB09 334 aa12.73□□□□□ -0.37
COL8A1-206ENST00000474648 STK32BQ9NY57 414 aa12.73□□□□□ -0.37
COL8A1-206ENST00000474648 SRP68Q9UHB9 627 aaKnown RBP12.73□□□□□ -0.37
COL8A1-206ENST00000474648 NARFQ9UHQ1 456 aa12.73□□□□□ -0.37
COL8A1-206ENST00000474648 TAF1LQ8IZX4 1826 aa12.72□□□□□ -0.37
COL8A1-206ENST00000474648 PNPLA7Q6ZV29 1317 aa12.72□□□□□ -0.37
COL8A1-206ENST00000474648 BEND3Q5T5X7 828 aa12.72□□□□□ -0.37
COL8A1-206ENST00000474648 KIF6Q6ZMV9 814 aa12.72□□□□□ -0.37
COL8A1-206ENST00000474648 NPM2Q86SE8 214 aaKnown RBP12.72□□□□□ -0.37
COL8A1-206ENST00000474648 ARXQ96QS3 562 aa12.72□□□□□ -0.37
COL8A1-206ENST00000474648 METTL22Q9BUU2 404 aaPredicted RBP12.72□□□□□ -0.37
COL8A1-206ENST00000474648 RGL2O15211 777 aa12.71□□□□□ -0.37
COL8A1-206ENST00000474648 IGKV5-2P06315 115 aa12.71□□□□□ -0.37
COL8A1-206ENST00000474648 RFC4P35249 363 aa12.71□□□□□ -0.37
COL8A1-206ENST00000474648 TCIRG1Q13488 830 aa12.71□□□□□ -0.37
COL8A1-206ENST00000474648 USPL1Q5W0Q7 1092 aa12.71□□□□□ -0.37
COL8A1-206ENST00000474648 INTS3Q68E01 1043 aaKnown RBP12.71□□□□□ -0.37
COL8A1-206ENST00000474648 GIGYF2Q6Y7W6 1299 aaKnown RBP12.71□□□□□ -0.37
COL8A1-206ENST00000474648 TMEM57Q8N5G2 664 aa12.71□□□□□ -0.37
COL8A1-206ENST00000474648 FLAD1Q8NFF5 587 aa12.71□□□□□ -0.37
COL8A1-206ENST00000474648 USP42Q9H9J4 1324 aaKnown RBP12.7□□□□□ -0.38
COL8A1-206ENST00000474648 PRR29P0C7W0 189 aa12.7□□□□□ -0.38
COL8A1-206ENST00000474648 MS4A1P11836 297 aa12.7□□□□□ -0.38
COL8A1-206ENST00000474648 TRIM28Q13263 835 aaKnown RBP12.7□□□□□ -0.38
COL8A1-206ENST00000474648 SLC4A10Q6U841 1118 aa12.7□□□□□ -0.38
COL8A1-206ENST00000474648 CLEC4GQ6UXB4 293 aa12.7□□□□□ -0.38
COL8A1-206ENST00000474648 ZNF34Q8IZ26 560 aa12.7□□□□□ -0.38
COL8A1-206ENST00000474648 MYD88Q99836 296 aa12.7□□□□□ -0.38
COL8A1-206ENST00000474648 ISCA1Q9BUE6 129 aa12.7□□□□□ -0.38
COL8A1-206ENST00000474648 ATP5J2-PTCD1G3V325 749 aa12.69□□□□□ -0.38
COL8A1-206ENST00000474648 ZPR1O75312 459 aa12.69□□□□□ -0.38
COL8A1-206ENST00000474648 GYS1P13807 737 aa12.69□□□□□ -0.38
COL8A1-206ENST00000474648 LINS1Q8NG48 757 aa12.69□□□□□ -0.38
COL8A1-206ENST00000474648 NEURL1BA8MQ27 555 aa12.68□□□□□ -0.38
COL8A1-206ENST00000474648 ALDH1L1O75891 902 aa12.68□□□□□ -0.38
COL8A1-206ENST00000474648 CCT4P50991 539 aaKnown RBP12.68□□□□□ -0.38
COL8A1-206ENST00000474648 IRX6P78412 446 aaPredicted RBP12.68□□□□□ -0.38
COL8A1-206ENST00000474648 CWF19L2Q2TBE0 894 aaKnown RBP12.68□□□□□ -0.38
COL8A1-206ENST00000474648 HSP90AB3PQ58FF7 597 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms