RNA–Protein interactions for RNA: ENST00000474568.5

ITGB1-210, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-210ENST00000474568 NIP7Q9Y221 180 aaKnown RBP eCLIP20.84■□□□□ 0.93
ITGB1-210ENST00000474568 KIAA1551Q9HCM1 1747 aa20.84■□□□□ 0.93
ITGB1-210ENST00000474568 CALD1Q05682 793 aaKnown RBP20.83■□□□□ 0.93
ITGB1-210ENST00000474568 PDIA6Q15084 440 aa20.83■□□□□ 0.93
ITGB1-210ENST00000474568 CLEC4GQ6UXB4 293 aa20.83■□□□□ 0.93
ITGB1-210ENST00000474568 CNBD1Q8NA66 436 aa20.83■□□□□ 0.93
ITGB1-210ENST00000474568 IFT57Q9NWB7 429 aa20.83■□□□□ 0.93
ITGB1-210ENST00000474568 PIM2Q9P1W9 311 aa20.83■□□□□ 0.93
ITGB1-210ENST00000474568 ERBB4Q15303 1308 aa20.82■□□□□ 0.92
ITGB1-210ENST00000474568 MAP3K15Q6ZN16 1313 aa20.82■□□□□ 0.92
ITGB1-210ENST00000474568 ZNF853P0CG23 659 aa20.82■□□□□ 0.92
ITGB1-210ENST00000474568 GNAI1P63096 354 aa20.82■□□□□ 0.92
ITGB1-210ENST00000474568 C2CD5Q86YS7 1000 aa20.82■□□□□ 0.92
ITGB1-210ENST00000474568 ELL2O00472 640 aaPredicted RBP20.81■□□□□ 0.92
ITGB1-210ENST00000474568 AIMP1Q12904 312 aaKnown RBP20.81■□□□□ 0.92
ITGB1-210ENST00000474568 HDGFL1Q5TGJ6 251 aa20.81■□□□□ 0.92
ITGB1-210ENST00000474568 DUSP27Q5VZP5 1158 aa20.81■□□□□ 0.92
ITGB1-210ENST00000474568 NBPF5PQ86XG9 351 aaPredicted RBP20.81■□□□□ 0.92
ITGB1-210ENST00000474568 BCORQ6W2J9 1755 aa20.81■□□□□ 0.92
ITGB1-210ENST00000474568 AFDNP55196 1824 aaKnown RBP20.81■□□□□ 0.92
ITGB1-210ENST00000474568 GPTP24298 496 aa20.8■□□□□ 0.92
ITGB1-210ENST00000474568 DALRD3Q5D0E6 543 aaKnown RBP20.8■□□□□ 0.92
ITGB1-210ENST00000474568 NRXN2Q9P2S2 1712 aa20.79■□□□□ 0.92
ITGB1-210ENST00000474568 ST5P78524 1137 aa20.79■□□□□ 0.92
ITGB1-210ENST00000474568 ARHGAP27Q6ZUM4 889 aa20.79■□□□□ 0.92
ITGB1-210ENST00000474568 LRP10Q7Z4F1 713 aa20.79■□□□□ 0.92
ITGB1-210ENST00000474568 WWC1Q8IX03 1113 aa20.79■□□□□ 0.92
ITGB1-210ENST00000474568 CHPF2Q9P2E5 772 aa20.79■□□□□ 0.92
ITGB1-210ENST00000474568 ERVV-1B6SEH8 477 aa20.78■□□□□ 0.92
ITGB1-210ENST00000474568 H0YIN7 160 aa20.78■□□□□ 0.92
ITGB1-210ENST00000474568 XAGE3Q8WTP9 111 aa20.78■□□□□ 0.92
ITGB1-210ENST00000474568 TSR2Q969E8 191 aaKnown RBP20.78■□□□□ 0.92
ITGB1-210ENST00000474568 ZNF622Q969S3 477 aaKnown RBP eCLIP20.78■□□□□ 0.925e-8■□□□□ 8.1
ITGB1-210ENST00000474568 COPS6Q7L5N1 327 aa20.77■□□□□ 0.92
ITGB1-210ENST00000474568 ZNF784Q8NCA9 323 aaPredicted RBP20.77■□□□□ 0.92
ITGB1-210ENST00000474568 BRIP1Q9BX63 1249 aa20.77■□□□□ 0.92
ITGB1-210ENST00000474568 DDX21Q9NR30 783 aaKnown RBP eCLIP20.77■□□□□ 0.92
ITGB1-210ENST00000474568 PDE6BP35913 854 aa20.76■□□□□ 0.91
ITGB1-210ENST00000474568 CCDC27Q2M243 656 aa20.76■□□□□ 0.91
ITGB1-210ENST00000474568 C8orf58Q8NAV2 365 aa20.76■□□□□ 0.91
ITGB1-210ENST00000474568 RGL2O15211 777 aa20.75■□□□□ 0.91
ITGB1-210ENST00000474568 HOXB7P09629 217 aa20.75■□□□□ 0.91
ITGB1-210ENST00000474568 GTF2E1P29083 439 aaPredicted RBP20.75■□□□□ 0.91
ITGB1-210ENST00000474568 TPTE2Q6XPS3 522 aa20.75■□□□□ 0.91
ITGB1-210ENST00000474568 ZNF219Q9P2Y4 722 aaPredicted RBP20.75■□□□□ 0.91
ITGB1-210ENST00000474568 GIGYF2Q6Y7W6 1299 aaKnown RBP20.74■□□□□ 0.91
ITGB1-210ENST00000474568 NUTM1Q86Y26 1132 aa20.74■□□□□ 0.91
ITGB1-210ENST00000474568 UBN2Q6ZU65 1347 aa20.74■□□□□ 0.91
ITGB1-210ENST00000474568 TTLL6Q8N841 843 aa20.73■□□□□ 0.91
ITGB1-210ENST00000474568 ZNF428Q96B54 188 aa20.73■□□□□ 0.91
ITGB1-210ENST00000474568 CHD4Q14839 1912 aa20.72■□□□□ 0.91
ITGB1-210ENST00000474568 ATP10DQ9P241 1426 aa20.72■□□□□ 0.91
ITGB1-210ENST00000474568 SUSD4Q5VX71 490 aa20.72■□□□□ 0.91
ITGB1-210ENST00000474568 TSPYL6Q8N831 410 aa20.72■□□□□ 0.91
ITGB1-210ENST00000474568 DBF4Q9UBU7 674 aaPredicted RBP20.72■□□□□ 0.91
ITGB1-210ENST00000474568 ERFEQ4G0M1 354 aa20.71■□□□□ 0.91
ITGB1-210ENST00000474568 ZNF34Q8IZ26 560 aa20.71■□□□□ 0.91
ITGB1-210ENST00000474568 ABCC12Q96J65 1359 aa20.71■□□□□ 0.91
ITGB1-210ENST00000474568 TCERG1O14776 1098 aaKnown RBP20.7■□□□□ 0.9
ITGB1-210ENST00000474568 ZNF526Q8TF50 670 aaPredicted RBP20.7■□□□□ 0.9
ITGB1-210ENST00000474568 NYXQ9GZU5 481 aa20.7■□□□□ 0.9
ITGB1-210ENST00000474568 ANKRD31Q8N7Z5 1873 aa20.7■□□□□ 0.9
ITGB1-210ENST00000474568 BRCA1P38398 1863 aaKnown RBP20.69■□□□□ 0.9
ITGB1-210ENST00000474568 SRGNP10124 158 aa20.69■□□□□ 0.9
ITGB1-210ENST00000474568 RASSF7Q02833 373 aa20.69■□□□□ 0.9
ITGB1-210ENST00000474568 PDZRN3Q9UPQ7 1066 aa20.69■□□□□ 0.9
ITGB1-210ENST00000474568 MASTLQ96GX5 879 aa20.68■□□□□ 0.9
ITGB1-210ENST00000474568 PHAXQ9H814 394 aaKnown RBP20.68■□□□□ 0.9
ITGB1-210ENST00000474568 HYPKQ9NX55 129 aa20.68■□□□□ 0.9
ITGB1-210ENST00000474568 IL16Q14005 1332 aa20.68■□□□□ 0.9
ITGB1-210ENST00000474568 COL11A2P13942 1736 aaPredicted RBP20.67■□□□□ 0.9
ITGB1-210ENST00000474568 C21orf2O43822 256 aa20.67■□□□□ 0.9
ITGB1-210ENST00000474568 NTSR2O95665 410 aa20.67■□□□□ 0.9
ITGB1-210ENST00000474568 NCBP3Q53F19 620 aaKnown RBP20.67■□□□□ 0.9
ITGB1-210ENST00000474568 STYK1Q6J9G0 422 aa20.67■□□□□ 0.9
ITGB1-210ENST00000474568 FANCIQ9NVI1 1328 aa20.67■□□□□ 0.9
ITGB1-210ENST00000474568 PARP10Q53GL7 1025 aa20.66■□□□□ 0.9
ITGB1-210ENST00000474568 HSP90AB3PQ58FF7 597 aa20.66■□□□□ 0.9
ITGB1-210ENST00000474568 C9orf131Q5VYM1 1079 aa20.66■□□□□ 0.9
ITGB1-210ENST00000474568 ANKRD13DQ6ZTN6 518 aa20.66■□□□□ 0.9
ITGB1-210ENST00000474568 PPP1R42Q7Z4L9 355 aa20.66■□□□□ 0.9
ITGB1-210ENST00000474568 WDR63Q8IWG1 891 aa20.66■□□□□ 0.9
ITGB1-210ENST00000474568 CNKSR1Q969H4 720 aa20.66■□□□□ 0.9
ITGB1-210ENST00000474568 SPINK5Q9NQ38 1064 aaPredicted RBP20.66■□□□□ 0.9
ITGB1-210ENST00000474568 NUP98P52948 1817 aa20.66■□□□□ 0.9
ITGB1-210ENST00000474568 TCIRG1Q13488 830 aa20.65■□□□□ 0.9
ITGB1-210ENST00000474568 TWISTNBQ3B726 338 aaPredicted RBP20.65■□□□□ 0.9
ITGB1-210ENST00000474568 CCDC30Q5VVM6 783 aa20.65■□□□□ 0.9
ITGB1-210ENST00000474568 PRPF40BQ6NWY9 871 aaKnown RBP20.65■□□□□ 0.9
ITGB1-210ENST00000474568 PLBD2Q8NHP8 589 aa20.65■□□□□ 0.9
ITGB1-210ENST00000474568 UTP14AQ9BVJ6 771 aaKnown RBP20.65■□□□□ 0.9
ITGB1-210ENST00000474568 ADCY9O60503 1353 aa20.64■□□□□ 0.89
ITGB1-210ENST00000474568 ATP5J2-PTCD1G3V325 749 aa20.64■□□□□ 0.89
ITGB1-210ENST00000474568 NPR1P16066 1061 aa20.64■□□□□ 0.89
ITGB1-210ENST00000474568 NLRP10Q86W26 655 aa20.64■□□□□ 0.89
ITGB1-210ENST00000474568 RNF181Q9P0P0 153 aa20.64■□□□□ 0.89
ITGB1-210ENST00000474568 IBTKQ9P2D0 1353 aaPredicted RBP20.63■□□□□ 0.89
ITGB1-210ENST00000474568 GOLGA2Q08379 1002 aa20.63■□□□□ 0.89
ITGB1-210ENST00000474568 C3orf67Q6ZVT6 689 aa20.63■□□□□ 0.89
ITGB1-210ENST00000474568 RIC3Q7Z5B4 369 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms