RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 NBPF1Q3BBV0 1214 aa6.6□□□□□ -1.35
ECHDC1-213ENST00000474240 STARD13Q9Y3M8 1113 aa6.6□□□□□ -1.35
ECHDC1-213ENST00000474240 EFSO43281 561 aa6.59□□□□□ -1.35
ECHDC1-213ENST00000474240 TATP17735 454 aaPredicted RBP6.59□□□□□ -1.35
ECHDC1-213ENST00000474240 VAC14Q08AM6 782 aa6.59□□□□□ -1.35
ECHDC1-213ENST00000474240 ZIC5Q96T25 663 aa6.59□□□□□ -1.35
ECHDC1-213ENST00000474240 CEP126Q9P2H0 1117 aa6.59□□□□□ -1.35
ECHDC1-213ENST00000474240 DOLKQ9UPQ8 538 aa6.59□□□□□ -1.35
ECHDC1-213ENST00000474240 NID1P14543 1247 aa6.58□□□□□ -1.36
ECHDC1-213ENST00000474240 SCNN1DP51172 638 aa6.58□□□□□ -1.36
ECHDC1-213ENST00000474240 GDF10P55107 478 aa6.58□□□□□ -1.36
ECHDC1-213ENST00000474240 ADGRE1Q14246 886 aa6.58□□□□□ -1.36
ECHDC1-213ENST00000474240 TSGA10IPQ3SY00 556 aa6.58□□□□□ -1.36
ECHDC1-213ENST00000474240 COBLO75128 1261 aa6.57□□□□□ -1.36
ECHDC1-213ENST00000474240 OXLD1Q5BKU9 147 aa6.57□□□□□ -1.36
ECHDC1-213ENST00000474240 TXNRD3Q86VQ6 643 aa6.57□□□□□ -1.36
ECHDC1-213ENST00000474240 MICALL1Q8N3F8 863 aa6.57□□□□□ -1.36
ECHDC1-213ENST00000474240 TP53INP1Q96A56 240 aa6.57□□□□□ -1.36
ECHDC1-213ENST00000474240 PRDM6Q9NQX0 595 aa6.57□□□□□ -1.36
ECHDC1-213ENST00000474240 ZDHHC3Q9NYG2 299 aa6.57□□□□□ -1.36
ECHDC1-213ENST00000474240 TIMELESSQ9UNS1 1208 aa6.57□□□□□ -1.36
ECHDC1-213ENST00000474240 C9orf172C9J069 976 aa6.56□□□□□ -1.36
ECHDC1-213ENST00000474240 SIN3BO75182 1162 aa6.56□□□□□ -1.36
ECHDC1-213ENST00000474240 INHAP05111 366 aa6.56□□□□□ -1.36
ECHDC1-213ENST00000474240 SELPP16109 830 aa6.56□□□□□ -1.36
ECHDC1-213ENST00000474240 SAMD5Q5TGI4 173 aa6.56□□□□□ -1.36
ECHDC1-213ENST00000474240 BICDL1Q6ZP65 573 aa6.56□□□□□ -1.36
ECHDC1-213ENST00000474240 ZNF295-AS1Q8N0V1 137 aa6.56□□□□□ -1.36
ECHDC1-213ENST00000474240 NFATC2IPQ8NCF5 419 aa6.56□□□□□ -1.36
ECHDC1-213ENST00000474240 KRTAP4-7Q9BYR0 210 aa6.56□□□□□ -1.36
ECHDC1-213ENST00000474240 USP3Q9Y6I4 520 aa6.56□□□□□ -1.36
ECHDC1-213ENST00000474240 ADARB2-AS1A8MUL3 147 aa6.55□□□□□ -1.36
ECHDC1-213ENST00000474240 LZTS3O60299 673 aaPredicted RBP6.55□□□□□ -1.36
ECHDC1-213ENST00000474240 ADH7P40394 386 aa6.55□□□□□ -1.36
ECHDC1-213ENST00000474240 SMTNP53814 917 aa6.55□□□□□ -1.36
ECHDC1-213ENST00000474240 USP4Q13107 963 aa6.55□□□□□ -1.36
ECHDC1-213ENST00000474240 LAMC2Q13753 1193 aa6.55□□□□□ -1.36
ECHDC1-213ENST00000474240 SLFNL1Q499Z3 407 aa6.55□□□□□ -1.36
ECHDC1-213ENST00000474240 SHISA2Q6UWI4 295 aa6.55□□□□□ -1.36
ECHDC1-213ENST00000474240 GLMNQ92990 594 aa6.55□□□□□ -1.36
ECHDC1-213ENST00000474240 CALR3Q96L12 384 aaKnown RBP6.55□□□□□ -1.36
ECHDC1-213ENST00000474240 ALG2Q9H553 416 aa6.55□□□□□ -1.36
ECHDC1-213ENST00000474240 ELNP15502 786 aa6.54□□□□□ -1.36
ECHDC1-213ENST00000474240 MAP7D1Q3KQU3 841 aa6.54□□□□□ -1.36
ECHDC1-213ENST00000474240 TRAPPC3LQ5T215 181 aa6.54□□□□□ -1.36
ECHDC1-213ENST00000474240 RAB44Q7Z6P3 723 aaPredicted RBP6.54□□□□□ -1.36
ECHDC1-213ENST00000474240 SLC30A3Q99726 388 aa6.54□□□□□ -1.36
ECHDC1-213ENST00000474240 SERTAD1Q9UHV2 236 aa6.54□□□□□ -1.36
ECHDC1-213ENST00000474240 LCE1DQ5T752 114 aa6.53□□□□□ -1.36
ECHDC1-213ENST00000474240 TNFRSF25Q93038 417 aa6.53□□□□□ -1.36
ECHDC1-213ENST00000474240 SIRT1Q96EB6 747 aa6.53□□□□□ -1.36
ECHDC1-213ENST00000474240 CABP1Q9NZU7 370 aa6.53□□□□□ -1.36
ECHDC1-213ENST00000474240 IQSEC3Q9UPP2 1182 aaPredicted RBP6.53□□□□□ -1.36
ECHDC1-213ENST00000474240 PARP3Q9Y6F1 533 aa6.53□□□□□ -1.36
ECHDC1-213ENST00000474240 A0A0A0MRY4 1105 aa6.52□□□□□ -1.37
ECHDC1-213ENST00000474240 PAX4O43316 350 aa6.52□□□□□ -1.37
ECHDC1-213ENST00000474240 NRG1Q02297 640 aaPredicted RBP6.52□□□□□ -1.37
ECHDC1-213ENST00000474240 HDGFL1Q5TGJ6 251 aa6.52□□□□□ -1.37
ECHDC1-213ENST00000474240 LRRC69Q6ZNQ3 347 aa6.52□□□□□ -1.37
ECHDC1-213ENST00000474240 CCDC97Q96F63 343 aaPredicted RBP6.52□□□□□ -1.37
ECHDC1-213ENST00000474240 SERPINA10Q9UK55 444 aa6.52□□□□□ -1.37
ECHDC1-213ENST00000474240 POM121CA8CG34 1229 aa6.51□□□□□ -1.37
ECHDC1-213ENST00000474240 TXLNAP40222 546 aa6.51□□□□□ -1.37
ECHDC1-213ENST00000474240 YBX3P16989 372 aaKnown RBP eCLIP6.5□□□□□ -1.37
ECHDC1-213ENST00000474240 SFSWAPQ12872 951 aaKnown RBP6.5□□□□□ -1.37
ECHDC1-213ENST00000474240 C20orf204Q6ZNR8 217 aa6.5□□□□□ -1.37
ECHDC1-213ENST00000474240 PHTF2Q8N3S3 785 aa6.5□□□□□ -1.37
ECHDC1-213ENST00000474240 LENG1Q96BZ8 264 aaPredicted RBP6.5□□□□□ -1.37
ECHDC1-213ENST00000474240 USP21Q9UK80 565 aa6.5□□□□□ -1.37
ECHDC1-213ENST00000474240 ZNF777Q9ULD5 760 aaPredicted RBP6.5□□□□□ -1.37
ECHDC1-213ENST00000474240 RNF112Q9ULX5 631 aa6.5□□□□□ -1.37
ECHDC1-213ENST00000474240 A6NJY4 79 aa6.49□□□□□ -1.37
ECHDC1-213ENST00000474240 TMEM229AB2RXF0 380 aa6.49□□□□□ -1.37
ECHDC1-213ENST00000474240 LILRB5O75023 590 aa6.49□□□□□ -1.37
ECHDC1-213ENST00000474240 RAC1P63000 192 aa6.49□□□□□ -1.37
ECHDC1-213ENST00000474240 SPEM2Q0P670 501 aa6.49□□□□□ -1.37
ECHDC1-213ENST00000474240 SSBP4Q9BWG4 385 aaPredicted RBP6.49□□□□□ -1.37
ECHDC1-213ENST00000474240 PCMTD2Q9NV79 361 aa6.49□□□□□ -1.37
ECHDC1-213ENST00000474240 CHIC2Q9UKJ5 165 aa6.49□□□□□ -1.37
ECHDC1-213ENST00000474240 COL17A1Q9UMD9 1497 aaPredicted RBP6.48□□□□□ -1.37
ECHDC1-213ENST00000474240 ATP9BO43861 1147 aa6.48□□□□□ -1.37
ECHDC1-213ENST00000474240 TXKP42681 527 aa6.48□□□□□ -1.37
ECHDC1-213ENST00000474240 MTFR1Q15390 333 aa6.48□□□□□ -1.37
ECHDC1-213ENST00000474240 PLEKHM2Q8IWE5 1019 aa6.48□□□□□ -1.37
ECHDC1-213ENST00000474240 ADAMTS19Q8TE59 1207 aa6.48□□□□□ -1.37
ECHDC1-213ENST00000474240 CDK2AP1O14519 115 aa6.47□□□□□ -1.37
ECHDC1-213ENST00000474240 TBC1D8BQ0IIM8 1120 aa6.47□□□□□ -1.37
ECHDC1-213ENST00000474240 EML3Q32P44 896 aa6.47□□□□□ -1.37
ECHDC1-213ENST00000474240 PLPP7Q8NBV4 271 aa6.47□□□□□ -1.37
ECHDC1-213ENST00000474240 ZDHHC1Q8WTX9 485 aa6.47□□□□□ -1.37
ECHDC1-213ENST00000474240 JPH1Q9HDC5 661 aaPredicted RBP6.47□□□□□ -1.37
ECHDC1-213ENST00000474240 SKIP12755 728 aa6.46□□□□□ -1.38
ECHDC1-213ENST00000474240 NEUROD1Q13562 356 aa6.46□□□□□ -1.38
ECHDC1-213ENST00000474240 TRIM50Q86XT4 487 aa6.46□□□□□ -1.38
ECHDC1-213ENST00000474240 FMNL2Q96PY5 1086 aa6.46□□□□□ -1.38
ECHDC1-213ENST00000474240 PPP1R12CQ9BZL4 782 aa6.46□□□□□ -1.38
ECHDC1-213ENST00000474240 USP17L5A8MUK1 530 aa6.45□□□□□ -1.38
ECHDC1-213ENST00000474240 FMR1NBQ8N0W7 255 aaPredicted RBP6.45□□□□□ -1.38
ECHDC1-213ENST00000474240 NUDT8Q8WV74 236 aa6.45□□□□□ -1.38
ECHDC1-213ENST00000474240 SLC4A9Q96Q91 983 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms