RNA–Protein interactions for RNA: ENST00000474226.1

UFD1-207, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 5

Gene UFD1, Length 293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-207ENST00000474226 HCN4Q9Y3Q4 1203 aa8.3□□□□□ -1.08
UFD1-207ENST00000474226 GPC6Q9Y625 555 aaPredicted RBP8.3□□□□□ -1.08
UFD1-207ENST00000474226 ATAD2Q6PL18 1390 aa8.3□□□□□ -1.08
UFD1-207ENST00000474226 OIP5O43482 229 aa8.29□□□□□ -1.08
UFD1-207ENST00000474226 C21orf2O43822 256 aa8.29□□□□□ -1.08
UFD1-207ENST00000474226 RFX1P22670 979 aa8.29□□□□□ -1.08
UFD1-207ENST00000474226 HIRAP54198 1017 aaPredicted RBP8.29□□□□□ -1.08
UFD1-207ENST00000474226 KCNMA1Q12791 1236 aa8.29□□□□□ -1.08
UFD1-207ENST00000474226 SAMD5Q5TGI4 173 aa8.29□□□□□ -1.08
UFD1-207ENST00000474226 LRRC69Q6ZNQ3 347 aa8.29□□□□□ -1.08
UFD1-207ENST00000474226 NEDD1Q8NHV4 660 aa8.29□□□□□ -1.08
UFD1-207ENST00000474226 SCG3Q8WXD2 468 aaKnown RBP8.29□□□□□ -1.08
UFD1-207ENST00000474226 GDF2Q9UK05 429 aaPredicted RBP8.29□□□□□ -1.08
UFD1-207ENST00000474226 UNC13AQ9UPW8 1703 aa8.29□□□□□ -1.08
UFD1-207ENST00000474226 FAM157BP0CG42 384 aa8.28□□□□□ -1.08
UFD1-207ENST00000474226 CD33P20138 364 aa8.28□□□□□ -1.08
UFD1-207ENST00000474226 CDCA8Q53HL2 280 aa8.28□□□□□ -1.08
UFD1-207ENST00000474226 C1orf53Q5VUE5 145 aa8.28□□□□□ -1.08
UFD1-207ENST00000474226 POTEAQ6S8J7 498 aa8.28□□□□□ -1.08
UFD1-207ENST00000474226 GOLGA6L1Q8N7Z2 621 aa8.28□□□□□ -1.08
UFD1-207ENST00000474226 CHMP7Q8WUX9 453 aaPredicted RBP8.28□□□□□ -1.08
UFD1-207ENST00000474226 C7orf43Q8WVR3 580 aa8.28□□□□□ -1.08
UFD1-207ENST00000474226 PHACTR1Q9C0D0 580 aa8.28□□□□□ -1.08
UFD1-207ENST00000474226 LGR5O75473 907 aa8.27□□□□□ -1.09
UFD1-207ENST00000474226 STAG2Q8N3U4 1231 aa8.27□□□□□ -1.09
UFD1-207ENST00000474226 GALNT6Q8NCL4 622 aa8.27□□□□□ -1.09
UFD1-207ENST00000474226 GAS2L2Q8NHY3 880 aa8.27□□□□□ -1.09
UFD1-207ENST00000474226 SCARF2Q96GP6 870 aaPredicted RBP8.27□□□□□ -1.09
UFD1-207ENST00000474226 C2orf49Q9BVC5 232 aaPredicted RBP8.27□□□□□ -1.09
UFD1-207ENST00000474226 SCRIBQ14160 1630 aa8.27□□□□□ -1.09
UFD1-207ENST00000474226 FAM182BQ5T319 152 aa8.26□□□□□ -1.09
UFD1-207ENST00000474226 ARXQ96QS3 562 aa8.26□□□□□ -1.09
UFD1-207ENST00000474226 GGA1Q9UJY5 639 aa8.26□□□□□ -1.09
UFD1-207ENST00000474226 HCN2Q9UL51 889 aa8.26□□□□□ -1.09
UFD1-207ENST00000474226 EFSO43281 561 aa8.25□□□□□ -1.09
UFD1-207ENST00000474226 ARAFP10398 606 aa8.25□□□□□ -1.09
UFD1-207ENST00000474226 LAMC2Q13753 1193 aa8.25□□□□□ -1.09
UFD1-207ENST00000474226 C1orf229Q6ZS94 237 aaPredicted RBP8.25□□□□□ -1.09
UFD1-207ENST00000474226 ALDH16A1Q8IZ83 802 aa8.25□□□□□ -1.09
UFD1-207ENST00000474226 FAM200AQ8TCP9 573 aa8.25□□□□□ -1.09
UFD1-207ENST00000474226 EDARADDQ8WWZ3 215 aa8.25□□□□□ -1.09
UFD1-207ENST00000474226 NGLY1Q96IV0 654 aa8.25□□□□□ -1.09
UFD1-207ENST00000474226 MARK1Q9P0L2 795 aa8.25□□□□□ -1.09
UFD1-207ENST00000474226 DNMT3AQ9Y6K1 912 aaPredicted RBP8.25□□□□□ -1.09
UFD1-207ENST00000474226 SHISA8B8ZZ34 492 aa8.24□□□□□ -1.09
UFD1-207ENST00000474226 IRS1P35568 1242 aa8.24□□□□□ -1.09
UFD1-207ENST00000474226 GSK3AP49840 483 aa8.24□□□□□ -1.09
UFD1-207ENST00000474226 RASSF7Q02833 373 aa8.24□□□□□ -1.09
UFD1-207ENST00000474226 SLCO4C1Q6ZQN7 724 aa8.24□□□□□ -1.09
UFD1-207ENST00000474226 PODNQ7Z5L7 613 aa8.24□□□□□ -1.09
UFD1-207ENST00000474226 STRN4Q9NRL3 753 aa8.24□□□□□ -1.09
UFD1-207ENST00000474226 ANKIB1Q9P2G1 1089 aa8.24□□□□□ -1.09
UFD1-207ENST00000474226 PRR12Q9ULL5 1215 aa8.24□□□□□ -1.09
UFD1-207ENST00000474226 IGFBP4P22692 258 aa8.23□□□□□ -1.09
UFD1-207ENST00000474226 HSH2DQ96JZ2 352 aa8.23□□□□□ -1.09
UFD1-207ENST00000474226 NOVA2Q9UNW9 492 aaKnown RBP8.23□□□□□ -1.09
UFD1-207ENST00000474226 CNTNAP5Q8WYK1 1306 aa8.23□□□□□ -1.09
UFD1-207ENST00000474226 BICRAQ9NZM4 1560 aa8.22□□□□□ -1.09
UFD1-207ENST00000474226 NEURL1BA8MQ27 555 aa8.22□□□□□ -1.09
UFD1-207ENST00000474226 GDF11O95390 407 aa8.22□□□□□ -1.09
UFD1-207ENST00000474226 ADH6P28332 368 aa8.22□□□□□ -1.09
UFD1-207ENST00000474226 TMEM151AQ8N4L1 468 aa8.22□□□□□ -1.09
UFD1-207ENST00000474226 BEND7Q8N7W2 519 aaPredicted RBP8.22□□□□□ -1.09
UFD1-207ENST00000474226 SUSD3Q96L08 255 aa8.22□□□□□ -1.09
UFD1-207ENST00000474226 PHF20L1A8MW92 1017 aa8.21□□□□□ -1.1
UFD1-207ENST00000474226 AMPD1P23109 780 aa8.21□□□□□ -1.1
UFD1-207ENST00000474226 HIF1AQ16665 826 aa8.21□□□□□ -1.1
UFD1-207ENST00000474226 ZNF468Q5VIY5 522 aaPredicted RBP8.21□□□□□ -1.1
UFD1-207ENST00000474226 KANK3Q6NY19 840 aa8.21□□□□□ -1.1
UFD1-207ENST00000474226 ZNF280CQ8ND82 737 aa8.21□□□□□ -1.1
UFD1-207ENST00000474226 CCDC97Q96F63 343 aaPredicted RBP8.21□□□□□ -1.1
UFD1-207ENST00000474226 CEP63Q96MT8 703 aa8.21□□□□□ -1.1
UFD1-207ENST00000474226 AVENQ9NQS1 362 aaPredicted RBP8.21□□□□□ -1.1
UFD1-207ENST00000474226 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.2□□□□□ -1.1
UFD1-207ENST00000474226 EPXP11678 715 aa8.2□□□□□ -1.1
UFD1-207ENST00000474226 WEE1P30291 646 aa8.2□□□□□ -1.1
UFD1-207ENST00000474226 PCBP4P57723 403 aaKnown RBP8.2□□□□□ -1.1
UFD1-207ENST00000474226 SFSWAPQ12872 951 aaKnown RBP8.2□□□□□ -1.1
UFD1-207ENST00000474226 RRAGCQ9HB90 399 aa8.2□□□□□ -1.1
UFD1-207ENST00000474226 BRD7Q9NPI1 651 aa8.2□□□□□ -1.1
UFD1-207ENST00000474226 KLF15Q9UIH9 416 aa8.2□□□□□ -1.1
UFD1-207ENST00000474226 CUX2O14529 1486 aa8.19□□□□□ -1.1
UFD1-207ENST00000474226 ARID3CA6NKF2 412 aa8.19□□□□□ -1.1
UFD1-207ENST00000474226 SNRPNP63162 240 aaKnown RBP8.19□□□□□ -1.1
UFD1-207ENST00000474226 RTN1Q16799 776 aa8.19□□□□□ -1.1
UFD1-207ENST00000474226 SERPINA10Q9UK55 444 aa8.19□□□□□ -1.1
UFD1-207ENST00000474226 FOXO3O43524 673 aa8.18□□□□□ -1.1
UFD1-207ENST00000474226 TYRO3Q06418 890 aa8.18□□□□□ -1.1
UFD1-207ENST00000474226 ELOAQ14241 798 aaKnown RBP8.18□□□□□ -1.1
UFD1-207ENST00000474226 GRIN2CQ14957 1233 aa8.18□□□□□ -1.1
UFD1-207ENST00000474226 SYT9Q86SS6 491 aa8.18□□□□□ -1.1
UFD1-207ENST00000474226 VTI1AQ96AJ9 217 aa8.18□□□□□ -1.1
UFD1-207ENST00000474226 BTBD6Q96KE9 485 aa8.18□□□□□ -1.1
UFD1-207ENST00000474226 SRPK2P78362 688 aaKnown RBP8.17□□□□□ -1.1
UFD1-207ENST00000474226 BTLAQ7Z6A9 289 aa8.17□□□□□ -1.1
UFD1-207ENST00000474226 FCHSD1Q86WN1 690 aa8.17□□□□□ -1.1
UFD1-207ENST00000474226 SLC30A3Q99726 388 aa8.17□□□□□ -1.1
UFD1-207ENST00000474226 MKL2Q9ULH7 1088 aa8.17□□□□□ -1.1
UFD1-207ENST00000474226 ZMIZ1Q9ULJ6 1067 aa8.17□□□□□ -1.1
UFD1-207ENST00000474226 KCNH4Q9UQ05 1017 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms