RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 ZBTB7BO15156 539 aaPredicted RBP6.99□□□□□ -1.29
BRCA1-212ENST00000473961 TMPRSS4Q9NRS4 437 aa6.99□□□□□ -1.29
BRCA1-212ENST00000473961 KIAA1024Q9UPX6 916 aa6.99□□□□□ -1.29
BRCA1-212ENST00000473961 PCDHGA11Q9Y5H2 935 aa6.99□□□□□ -1.29
BRCA1-212ENST00000473961 SFI1A8K8P3 1242 aa6.98□□□□□ -1.29
BRCA1-212ENST00000473961 GNB5O14775 395 aa6.98□□□□□ -1.29
BRCA1-212ENST00000473961 BACH1O14867 736 aa6.98□□□□□ -1.29
BRCA1-212ENST00000473961 ADD1P35611 737 aaKnown RBP6.98□□□□□ -1.29
BRCA1-212ENST00000473961 SERPINB4P48594 390 aa6.98□□□□□ -1.29
BRCA1-212ENST00000473961 RNF144AP50876 292 aaPredicted RBP6.98□□□□□ -1.29
BRCA1-212ENST00000473961 ZNF784Q8NCA9 323 aaPredicted RBP6.98□□□□□ -1.29
BRCA1-212ENST00000473961 KLRG1Q96E93 195 aa6.98□□□□□ -1.29
BRCA1-212ENST00000473961 DYRK1BQ9Y463 629 aa6.98□□□□□ -1.29
BRCA1-212ENST00000473961 LILRA1O75019 489 aa6.97□□□□□ -1.29
BRCA1-212ENST00000473961 ABL1P00519 1130 aa6.97□□□□□ -1.29
BRCA1-212ENST00000473961 RAB15P59190 212 aa6.97□□□□□ -1.29
BRCA1-212ENST00000473961 SF3B2Q13435 895 aaKnown RBP6.97□□□□□ -1.29
BRCA1-212ENST00000473961 NKAPLQ5M9Q1 402 aa6.97□□□□□ -1.29
BRCA1-212ENST00000473961 TAS1R3Q7RTX0 852 aa6.97□□□□□ -1.29
BRCA1-212ENST00000473961 GLYCTKQ8IVS8 523 aa6.97□□□□□ -1.29
BRCA1-212ENST00000473961 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.97□□□□□ -1.297e-6■■■■■ 74.5
BRCA1-212ENST00000473961 DKK1O94907 266 aa6.96□□□□□ -1.3
BRCA1-212ENST00000473961 OCLNQ16625 522 aa6.96□□□□□ -1.3
BRCA1-212ENST00000473961 CC2D2BQ6DHV5 1058 aa6.96□□□□□ -1.3
BRCA1-212ENST00000473961 GAS2L1Q99501 681 aaPredicted RBP6.96□□□□□ -1.3
BRCA1-212ENST00000473961 SLAIN2Q9P270 581 aa6.96□□□□□ -1.3
BRCA1-212ENST00000473961 GDF2Q9UK05 429 aaPredicted RBP6.96□□□□□ -1.3
BRCA1-212ENST00000473961 H3BRB1 525 aa6.95□□□□□ -1.3
BRCA1-212ENST00000473961 PIK3R2O00459 728 aa6.95□□□□□ -1.3
BRCA1-212ENST00000473961 FOXO3O43524 673 aa6.95□□□□□ -1.3
BRCA1-212ENST00000473961 GATA4P43694 442 aa6.95□□□□□ -1.3
BRCA1-212ENST00000473961 GAS2L2Q8NHY3 880 aa6.95□□□□□ -1.3
BRCA1-212ENST00000473961 COL26A1Q96A83 441 aa6.95□□□□□ -1.3
BRCA1-212ENST00000473961 VTI1AQ96AJ9 217 aa6.95□□□□□ -1.3
BRCA1-212ENST00000473961 PRIMPOLQ96LW4 560 aa6.95□□□□□ -1.3
BRCA1-212ENST00000473961 TUT1Q9H6E5 874 aaKnown RBP6.95□□□□□ -1.3
BRCA1-212ENST00000473961 RBM47A0AV96 593 aaKnown RBP6.94□□□□□ -1.3
BRCA1-212ENST00000473961 C21orf2O43822 256 aa6.94□□□□□ -1.3
BRCA1-212ENST00000473961 THBS1P07996 1170 aa6.94□□□□□ -1.3
BRCA1-212ENST00000473961 WEE1P30291 646 aa6.94□□□□□ -1.3
BRCA1-212ENST00000473961 DGKGP49619 791 aa6.94□□□□□ -1.3
BRCA1-212ENST00000473961 ERVK-9P63128 1117 aa6.94□□□□□ -1.3
BRCA1-212ENST00000473961 NUCKS1Q9H1E3 243 aaKnown RBP6.94□□□□□ -1.3
BRCA1-212ENST00000473961 NOP53Q9NZM5 478 aaKnown RBP6.94□□□□□ -1.3
BRCA1-212ENST00000473961 ERVH48-1M5A8F1 160 aa6.93□□□□□ -1.3
BRCA1-212ENST00000473961 WASLO00401 505 aaPredicted RBP6.93□□□□□ -1.3
BRCA1-212ENST00000473961 DYRK3O43781 588 aa6.93□□□□□ -1.3
BRCA1-212ENST00000473961 ICMTO60725 284 aa6.93□□□□□ -1.3
BRCA1-212ENST00000473961 IGFBP4P22692 258 aa6.93□□□□□ -1.3
BRCA1-212ENST00000473961 AMPD1P23109 780 aa6.93□□□□□ -1.3
BRCA1-212ENST00000473961 ESCO1Q5FWF5 840 aa6.93□□□□□ -1.3
BRCA1-212ENST00000473961 CYP2U1Q7Z449 544 aa6.93□□□□□ -1.3
BRCA1-212ENST00000473961 ZSCAN29Q8IWY8 852 aaPredicted RBP6.93□□□□□ -1.3
BRCA1-212ENST00000473961 GOLGA6L1Q8N7Z2 621 aa6.93□□□□□ -1.3
BRCA1-212ENST00000473961 TSEN2Q8NCE0 465 aaKnown RBP6.93□□□□□ -1.3
BRCA1-212ENST00000473961 CFHR5Q9BXR6 569 aa6.93□□□□□ -1.3
BRCA1-212ENST00000473961 KRTAP4-9Q9BYQ8 210 aa6.93□□□□□ -1.3
BRCA1-212ENST00000473961 CHMP3Q9Y3E7 222 aa6.93□□□□□ -1.3
BRCA1-212ENST00000473961 FKBP4Q02790 459 aaKnown RBP eCLIP6.92□□□□□ -1.3
BRCA1-212ENST00000473961 ZNF326Q5BKZ1 582 aaKnown RBP6.92□□□□□ -1.3
BRCA1-212ENST00000473961 DNAJC14Q6Y2X3 702 aaPredicted RBP6.92□□□□□ -1.3
BRCA1-212ENST00000473961 ZNF428Q96B54 188 aa6.92□□□□□ -1.3
BRCA1-212ENST00000473961 BCL2L13Q9BXK5 485 aa6.92□□□□□ -1.3
BRCA1-212ENST00000473961 ZNF358Q9NW07 568 aa6.92□□□□□ -1.3
BRCA1-212ENST00000473961 MAPK1P28482 360 aa6.91□□□□□ -1.3
BRCA1-212ENST00000473961 GDF10P55107 478 aa6.91□□□□□ -1.3
BRCA1-212ENST00000473961 ZNF211Q13398 564 aaPredicted RBP6.91□□□□□ -1.3
BRCA1-212ENST00000473961 SLCO4C1Q6ZQN7 724 aa6.91□□□□□ -1.3
BRCA1-212ENST00000473961 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.91□□□□□ -1.3
BRCA1-212ENST00000473961 GTF3C2Q8WUA4 911 aaPredicted RBP6.91□□□□□ -1.3
BRCA1-212ENST00000473961 MKNK1Q9BUB5 465 aa6.91□□□□□ -1.3
BRCA1-212ENST00000473961 DCTN4Q9UJW0 460 aa6.91□□□□□ -1.3
BRCA1-212ENST00000473961 FAM13AO94988 1023 aa6.9□□□□□ -1.3
BRCA1-212ENST00000473961 GNRH1P01148 92 aa6.9□□□□□ -1.3
BRCA1-212ENST00000473961 GPC1P35052 558 aa6.9□□□□□ -1.3
BRCA1-212ENST00000473961 POU4F2Q12837 409 aa6.9□□□□□ -1.3
BRCA1-212ENST00000473961 BTBD6Q96KE9 485 aa6.9□□□□□ -1.3
BRCA1-212ENST00000473961 TPSG1Q9NRR2 321 aa6.9□□□□□ -1.3
BRCA1-212ENST00000473961 COBLO75128 1261 aa6.89□□□□□ -1.31
BRCA1-212ENST00000473961 INHAP05111 366 aa6.89□□□□□ -1.31
BRCA1-212ENST00000473961 ITGAEP38570 1179 aa6.89□□□□□ -1.31
BRCA1-212ENST00000473961 SCTRP47872 440 aa6.89□□□□□ -1.31
BRCA1-212ENST00000473961 FKBP5Q13451 457 aaPredicted RBP6.89□□□□□ -1.31
BRCA1-212ENST00000473961 LRP8Q14114 963 aa6.89□□□□□ -1.31
BRCA1-212ENST00000473961 HELQQ8TDG4 1101 aa6.89□□□□□ -1.31
BRCA1-212ENST00000473961 CYLDQ9NQC7 956 aa6.89□□□□□ -1.31
BRCA1-212ENST00000473961 ANKRD33BA6NCL7 494 aa6.88□□□□□ -1.31
BRCA1-212ENST00000473961 TMEM229AB2RXF0 380 aa6.88□□□□□ -1.31
BRCA1-212ENST00000473961 PRSS36Q5K4E3 855 aa6.88□□□□□ -1.31
BRCA1-212ENST00000473961 NBPF15Q8N660 670 aa6.88□□□□□ -1.31
BRCA1-212ENST00000473961 SCG3Q8WXD2 468 aaKnown RBP6.88□□□□□ -1.31
BRCA1-212ENST00000473961 OSBPL3Q9H4L5 887 aa6.88□□□□□ -1.31
BRCA1-212ENST00000473961 ATAD2Q6PL18 1390 aa6.87□□□□□ -1.31
BRCA1-212ENST00000473961 FGD1P98174 961 aa6.87□□□□□ -1.31
BRCA1-212ENST00000473961 COL19A1Q14993 1142 aa6.87□□□□□ -1.31
BRCA1-212ENST00000473961 NBPF10Q6P3W6 841 aaKnown RBP6.87□□□□□ -1.31
BRCA1-212ENST00000473961 GIPC2Q8TF65 315 aa6.87□□□□□ -1.31
BRCA1-212ENST00000473961 ASB16Q96NS5 453 aa6.87□□□□□ -1.31
BRCA1-212ENST00000473961 KRTAP4-2Q9BYR5 136 aa6.87□□□□□ -1.31
BRCA1-212ENST00000473961 ANO2Q9NQ90 1003 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms