RNA–Protein interactions for RNA: ENST00000473943.1

PHF20-209, Transcript of PHD finger protein 20, humanhuman

TSL 2

Gene PHF20, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF20-209ENST00000473943 CNKSR1Q969H4 720 aa18.3■□□□□ 0.52
PHF20-209ENST00000473943 ZNF219Q9P2Y4 722 aaPredicted RBP18.3■□□□□ 0.52
PHF20-209ENST00000473943 NIP7Q9Y221 180 aaKnown RBP eCLIP18.3■□□□□ 0.52
PHF20-209ENST00000473943 C21orf2O43822 256 aa18.29■□□□□ 0.52
PHF20-209ENST00000473943 STYK1Q6J9G0 422 aa18.29■□□□□ 0.52
PHF20-209ENST00000473943 RRP7AQ9Y3A4 280 aaKnown RBP18.29■□□□□ 0.52
PHF20-209ENST00000473943 MYBBP1AQ9BQG0 1328 aaKnown RBP18.28■□□□□ 0.52
PHF20-209ENST00000473943 ZC3H4Q9UPT8 1303 aaKnown RBP18.28■□□□□ 0.52
PHF20-209ENST00000473943 SRGNP10124 158 aa18.28■□□□□ 0.52
PHF20-209ENST00000473943 MASTLQ96GX5 879 aa18.28■□□□□ 0.52
PHF20-209ENST00000473943 RRAGCQ9HB90 399 aa18.28■□□□□ 0.52
PHF20-209ENST00000473943 FAM177BA6PVY3 158 aa18.27■□□□□ 0.52
PHF20-209ENST00000473943 NFKBIEO00221 500 aa18.27■□□□□ 0.52
PHF20-209ENST00000473943 GTF2E1P29083 439 aaPredicted RBP18.27■□□□□ 0.52
PHF20-209ENST00000473943 LMOD3Q0VAK6 560 aa18.27■□□□□ 0.52
PHF20-209ENST00000473943 TSPYL4Q9UJ04 414 aa18.27■□□□□ 0.52
PHF20-209ENST00000473943 HLFQ16534 295 aa18.26■□□□□ 0.51
PHF20-209ENST00000473943 KIF6Q6ZMV9 814 aa18.26■□□□□ 0.51
PHF20-209ENST00000473943 RBM46Q8TBY0 533 aaKnown RBP18.26■□□□□ 0.51
PHF20-209ENST00000473943 DLEC1Q9Y238 1755 aa18.26■□□□□ 0.51
PHF20-209ENST00000473943 ERVV-1B6SEH8 477 aa18.25■□□□□ 0.51
PHF20-209ENST00000473943 MYL6BP14649 208 aa18.25■□□□□ 0.51
PHF20-209ENST00000473943 TMPOP42166 694 aaKnown RBP18.25■□□□□ 0.51
PHF20-209ENST00000473943 PRELPP51888 382 aa18.25■□□□□ 0.51
PHF20-209ENST00000473943 WDR43Q15061 677 aaKnown RBP eCLIP18.25■□□□□ 0.51
PHF20-209ENST00000473943 SOGA3Q5TF21 947 aa18.25■□□□□ 0.51
PHF20-209ENST00000473943 PRPF40BQ6NWY9 871 aaKnown RBP18.25■□□□□ 0.51
PHF20-209ENST00000473943 DLG5Q8TDM6 1919 aa18.25■□□□□ 0.51
PHF20-209ENST00000473943 GLTPD2A6NH11 291 aa18.24■□□□□ 0.51
PHF20-209ENST00000473943 NPR1P16066 1061 aa18.24■□□□□ 0.51
PHF20-209ENST00000473943 APLP1P51693 650 aa18.24■□□□□ 0.51
PHF20-209ENST00000473943 BABAM1Q9NWV8 329 aa18.24■□□□□ 0.51
PHF20-209ENST00000473943 BCORQ6W2J9 1755 aa18.24■□□□□ 0.51
PHF20-209ENST00000473943 SBF1O95248 1867 aa18.24■□□□□ 0.51
PHF20-209ENST00000473943 ANKRD31Q8N7Z5 1873 aa18.24■□□□□ 0.51
PHF20-209ENST00000473943 MAP3K15Q6ZN16 1313 aa18.23■□□□□ 0.51
PHF20-209ENST00000473943 NYXQ9GZU5 481 aa18.23■□□□□ 0.51
PHF20-209ENST00000473943 TAOK3Q9H2K8 898 aa18.23■□□□□ 0.51
PHF20-209ENST00000473943 KLRG2A4D1S0 409 aaPredicted RBP18.22■□□□□ 0.51
PHF20-209ENST00000473943 FSTL1Q12841 308 aa18.22■□□□□ 0.51
PHF20-209ENST00000473943 NEUROD2Q15784 382 aa18.22■□□□□ 0.51
PHF20-209ENST00000473943 ERFEQ4G0M1 354 aa18.22■□□□□ 0.51
PHF20-209ENST00000473943 DPY19L2Q6NUT2 758 aa18.22■□□□□ 0.51
PHF20-209ENST00000473943 TTLL7Q6ZT98 887 aa18.22■□□□□ 0.51
PHF20-209ENST00000473943 CCDC146Q8IYE0 955 aa18.22■□□□□ 0.51
PHF20-209ENST00000473943 ERBB4Q15303 1308 aa18.22■□□□□ 0.51
PHF20-209ENST00000473943 VEGFAP15692 232 aaPredicted RBP18.21■□□□□ 0.51
PHF20-209ENST00000473943 EIF2S2P20042 333 aaKnown RBP18.21■□□□□ 0.51
PHF20-209ENST00000473943 RUNDC1Q96C34 613 aa18.21■□□□□ 0.51
PHF20-209ENST00000473943 ZBTB3Q9H5J0 574 aa18.21■□□□□ 0.51
PHF20-209ENST00000473943 KDM3BQ7LBC6 1761 aa18.21■□□□□ 0.51
PHF20-209ENST00000473943 LTBP3Q9NS15 1303 aa18.21■□□□□ 0.51
PHF20-209ENST00000473943 ALDH1B1P30837 517 aa18.2■□□□□ 0.5
PHF20-209ENST00000473943 COL11A2P13942 1736 aaPredicted RBP18.19■□□□□ 0.5
PHF20-209ENST00000473943 GPTP24298 496 aa18.19■□□□□ 0.5
PHF20-209ENST00000473943 CCDC93Q567U6 631 aa18.19■□□□□ 0.5
PHF20-209ENST00000473943 LAMB4A4D0S4 1761 aa18.19■□□□□ 0.5
PHF20-209ENST00000473943 NUTM1Q86Y26 1132 aa18.18■□□□□ 0.5
PHF20-209ENST00000473943 SMC1BQ8NDV3 1235 aa18.18■□□□□ 0.5
PHF20-209ENST00000473943 C7orf43Q8WVR3 580 aa18.18■□□□□ 0.5
PHF20-209ENST00000473943 ADAMTS8Q9UP79 889 aa18.18■□□□□ 0.5
PHF20-209ENST00000473943 LAS1LQ9Y4W2 734 aaKnown RBP18.18■□□□□ 0.5
PHF20-209ENST00000473943 SLX4Q8IY92 1834 aa18.17■□□□□ 0.5
PHF20-209ENST00000473943 GIGYF2Q6Y7W6 1299 aaKnown RBP18.16■□□□□ 0.5
PHF20-209ENST00000473943 RTKN2Q8IZC4 609 aa18.16■□□□□ 0.5
PHF20-209ENST00000473943 PRKRIP1Q9H875 184 aaPredicted RBP18.16■□□□□ 0.5
PHF20-209ENST00000473943 CHL1O00533 1208 aa18.15■□□□□ 0.5
PHF20-209ENST00000473943 PDIA6Q15084 440 aa18.15■□□□□ 0.5
PHF20-209ENST00000473943 SUSD4Q5VX71 490 aa18.15■□□□□ 0.5
PHF20-209ENST00000473943 ZNF34Q8IZ26 560 aa18.15■□□□□ 0.5
PHF20-209ENST00000473943 NECTIN2Q92692 538 aa18.15■□□□□ 0.5
PHF20-209ENST00000473943 RPGRQ92834 1020 aaKnown RBP18.15■□□□□ 0.5
PHF20-209ENST00000473943 TRIM35Q9UPQ4 493 aa18.15■□□□□ 0.5
PHF20-209ENST00000473943 TNRC6CQ9HCJ0 1690 aaKnown RBP18.15■□□□□ 0.5
PHF20-209ENST00000473943 FKBP4Q02790 459 aaKnown RBP eCLIP18.14■□□□□ 0.49
PHF20-209ENST00000473943 CRY2Q49AN0 593 aa18.14■□□□□ 0.49
PHF20-209ENST00000473943 PARP10Q53GL7 1025 aa18.14■□□□□ 0.49
PHF20-209ENST00000473943 PPP1R42Q7Z4L9 355 aa18.14■□□□□ 0.49
PHF20-209ENST00000473943 UBN2Q6ZU65 1347 aa18.14■□□□□ 0.49
PHF20-209ENST00000473943 ABCC12Q96J65 1359 aa18.14■□□□□ 0.49
PHF20-209ENST00000473943 FER1L6Q2WGJ9 1857 aa18.14■□□□□ 0.49
PHF20-209ENST00000473943 CCDC88AQ3V6T2 1871 aa18.14■□□□□ 0.49
PHF20-209ENST00000473943 ANXA1P04083 346 aa18.13■□□□□ 0.49
PHF20-209ENST00000473943 PROSER3Q2NL68 480 aa18.13■□□□□ 0.49
PHF20-209ENST00000473943 OLFM4Q6UX06 510 aa18.13■□□□□ 0.49
PHF20-209ENST00000473943 LRP10Q7Z4F1 713 aa18.13■□□□□ 0.49
PHF20-209ENST00000473943 ZNF277Q9NRM2 450 aaPredicted RBP18.13■□□□□ 0.49
PHF20-209ENST00000473943 IBTKQ9P2D0 1353 aaPredicted RBP18.13■□□□□ 0.49
PHF20-209ENST00000473943 DDNO94850 711 aaPredicted RBP18.12■□□□□ 0.49
PHF20-209ENST00000473943 AIMP1Q12904 312 aaKnown RBP18.12■□□□□ 0.49
PHF20-209ENST00000473943 COPS6Q7L5N1 327 aa18.12■□□□□ 0.49
PHF20-209ENST00000473943 DNAJC5GQ8N7S2 189 aa18.12■□□□□ 0.49
PHF20-209ENST00000473943 TIAM2Q8IVF5 1701 aa18.12■□□□□ 0.49
PHF20-209ENST00000473943 POTECB2RU33 542 aa18.11■□□□□ 0.49
PHF20-209ENST00000473943 NTSR2O95665 410 aa18.11■□□□□ 0.49
PHF20-209ENST00000473943 HOXA10P31260 410 aaPredicted RBP18.11■□□□□ 0.49
PHF20-209ENST00000473943 HSP90AB3PQ58FF7 597 aa18.11■□□□□ 0.49
PHF20-209ENST00000473943 CC2D2BQ6DHV5 1058 aa18.11■□□□□ 0.49
PHF20-209ENST00000473943 XAGE3Q8WTP9 111 aa18.11■□□□□ 0.49
PHF20-209ENST00000473943 RBM17Q96I25 401 aaKnown RBP18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms