RNA–Protein interactions for RNA: ENST00000473417.5

SNX4-204, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-204ENST00000473417 DICER1Q9UPY3 1922 aaKnown RBP23.71■■□□□ 1.39
SNX4-204ENST00000473417 C2CD5Q86YS7 1000 aa23.7■■□□□ 1.38
SNX4-204ENST00000473417 H0YIN7 160 aa23.69■■□□□ 1.38
SNX4-204ENST00000473417 SETDB2Q96T68 719 aa23.69■■□□□ 1.38
SNX4-204ENST00000473417 BRIP1Q9BX63 1249 aa23.69■■□□□ 1.38
SNX4-204ENST00000473417 C9orf131Q5VYM1 1079 aa23.68■■□□□ 1.38
SNX4-204ENST00000473417 CLEC4GQ6UXB4 293 aa23.68■■□□□ 1.38
SNX4-204ENST00000473417 TTLL6Q8N841 843 aa23.68■■□□□ 1.38
SNX4-204ENST00000473417 PDZRN3Q9UPQ7 1066 aa23.68■■□□□ 1.38
SNX4-204ENST00000473417 SLX4Q8IY92 1834 aa23.68■■□□□ 1.38
SNX4-204ENST00000473417 KIF3CO14782 793 aa23.67■■□□□ 1.38
SNX4-204ENST00000473417 RGL2O15211 777 aa23.67■■□□□ 1.38
SNX4-204ENST00000473417 EIF4A1P60842 406 aaKnown RBP23.67■■□□□ 1.38
SNX4-204ENST00000473417 CNBD1Q8NA66 436 aa23.67■■□□□ 1.38
SNX4-204ENST00000473417 PDE6BP35913 854 aa23.66■■□□□ 1.38
SNX4-204ENST00000473417 ZNF652Q9Y2D9 606 aa23.66■■□□□ 1.38
SNX4-204ENST00000473417 APAF1O14727 1248 aa23.65■■□□□ 1.38
SNX4-204ENST00000473417 DIEXFQ68CQ4 756 aaKnown RBP23.65■■□□□ 1.38
SNX4-204ENST00000473417 CCDC24Q8N4L8 307 aa23.65■■□□□ 1.38
SNX4-204ENST00000473417 RNF181Q9P0P0 153 aa23.65■■□□□ 1.38
SNX4-204ENST00000473417 LMOD3Q0VAK6 560 aa23.64■■□□□ 1.37
SNX4-204ENST00000473417 ST5P78524 1137 aa23.63■■□□□ 1.37
SNX4-204ENST00000473417 RASSF7Q02833 373 aa23.63■■□□□ 1.37
SNX4-204ENST00000473417 ANKRD36CQ5JPF3 1778 aa23.63■■□□□ 1.37
SNX4-204ENST00000473417 HSPA6P17066 643 aa23.62■■□□□ 1.37
SNX4-204ENST00000473417 FAM9BQ8IZU0 186 aa23.62■■□□□ 1.37
SNX4-204ENST00000473417 NPHP1O15259 732 aa23.61■■□□□ 1.37
SNX4-204ENST00000473417 TRIM35Q9UPQ4 493 aa23.61■■□□□ 1.37
SNX4-204ENST00000473417 ZC3H4Q9UPT8 1303 aaKnown RBP23.6■■□□□ 1.37
SNX4-204ENST00000473417 NBPF5PQ86XG9 351 aaPredicted RBP23.6■■□□□ 1.37
SNX4-204ENST00000473417 ZNF622Q969S3 477 aaKnown RBP eCLIP23.6■■□□□ 1.37
SNX4-204ENST00000473417 TSPYL4Q9UJ04 414 aa23.6■■□□□ 1.37
SNX4-204ENST00000473417 NIP7Q9Y221 180 aaKnown RBP eCLIP23.6■■□□□ 1.37
SNX4-204ENST00000473417 NFKBIEO00221 500 aa23.59■■□□□ 1.37
SNX4-204ENST00000473417 SRGNP10124 158 aa23.59■■□□□ 1.37
SNX4-204ENST00000473417 PRELPP51888 382 aa23.59■■□□□ 1.37
SNX4-204ENST00000473417 HLFQ16534 295 aa23.59■■□□□ 1.37
SNX4-204ENST00000473417 NMRK2Q9NPI5 230 aa23.59■■□□□ 1.37
SNX4-204ENST00000473417 BABAM1Q9NWV8 329 aa23.59■■□□□ 1.37
SNX4-204ENST00000473417 ERBB4Q15303 1308 aa23.59■■□□□ 1.37
SNX4-204ENST00000473417 LMNB1P20700 586 aa23.58■■□□□ 1.37
SNX4-204ENST00000473417 STYK1Q6J9G0 422 aa23.58■■□□□ 1.37
SNX4-204ENST00000473417 TOMM70O94826 608 aa23.57■■□□□ 1.36
SNX4-204ENST00000473417 MAP3K15Q6ZN16 1313 aa23.57■■□□□ 1.36
SNX4-204ENST00000473417 KDM2BQ8NHM5 1336 aa23.57■■□□□ 1.36
SNX4-204ENST00000473417 ERVV-1B6SEH8 477 aa23.56■■□□□ 1.36
SNX4-204ENST00000473417 C21orf2O43822 256 aa23.55■■□□□ 1.36
SNX4-204ENST00000473417 MYL6BP14649 208 aa23.55■■□□□ 1.36
SNX4-204ENST00000473417 TPTE2Q6XPS3 522 aa23.55■■□□□ 1.36
SNX4-204ENST00000473417 TTLL7Q6ZT98 887 aa23.55■■□□□ 1.36
SNX4-204ENST00000473417 NGEFQ8N5V2 710 aa23.55■■□□□ 1.36
SNX4-204ENST00000473417 CNKSR1Q969H4 720 aa23.55■■□□□ 1.36
SNX4-204ENST00000473417 MASTLQ96GX5 879 aa23.55■■□□□ 1.36
SNX4-204ENST00000473417 KLRG2A4D1S0 409 aaPredicted RBP23.54■■□□□ 1.36
SNX4-204ENST00000473417 CCER2I3L3R5 266 aa23.54■■□□□ 1.36
SNX4-204ENST00000473417 PRPF40BQ6NWY9 871 aaKnown RBP23.54■■□□□ 1.36
SNX4-204ENST00000473417 KIF6Q6ZMV9 814 aa23.54■■□□□ 1.36
SNX4-204ENST00000473417 MIER1Q8N108 512 aa23.53■■□□□ 1.36
SNX4-204ENST00000473417 LAS1LQ9Y4W2 734 aaKnown RBP23.53■■□□□ 1.36
SNX4-204ENST00000473417 LTBP3Q9NS15 1303 aa23.53■■□□□ 1.36
SNX4-204ENST00000473417 WDR90Q96KV7 1748 aa23.53■■□□□ 1.36
SNX4-204ENST00000473417 IBTKQ9P2D0 1353 aaPredicted RBP23.52■■□□□ 1.36
SNX4-204ENST00000473417 RIC1Q4ADV7 1423 aa23.52■■□□□ 1.36
SNX4-204ENST00000473417 LRP10Q7Z4F1 713 aa23.52■■□□□ 1.36
SNX4-204ENST00000473417 ZNF219Q9P2Y4 722 aaPredicted RBP23.52■■□□□ 1.36
SNX4-204ENST00000473417 ABCC12Q96J65 1359 aa23.52■■□□□ 1.36
SNX4-204ENST00000473417 LAMB2P55268 1798 aa23.51■■□□□ 1.35
SNX4-204ENST00000473417 FAM177BA6PVY3 158 aa23.51■■□□□ 1.35
SNX4-204ENST00000473417 NPR1P16066 1061 aa23.51■■□□□ 1.35
SNX4-204ENST00000473417 PDIA6Q15084 440 aa23.5■■□□□ 1.35
SNX4-204ENST00000473417 C16orf71Q8IYS4 520 aaPredicted RBP23.5■■□□□ 1.35
SNX4-204ENST00000473417 ZBTB3Q9H5J0 574 aa23.5■■□□□ 1.35
SNX4-204ENST00000473417 SALL2Q9Y467 1007 aaPredicted RBP23.5■■□□□ 1.35
SNX4-204ENST00000473417 UBN2Q6ZU65 1347 aa23.5■■□□□ 1.35
SNX4-204ENST00000473417 SOGA3Q5TF21 947 aa23.49■■□□□ 1.35
SNX4-204ENST00000473417 RBM46Q8TBY0 533 aaKnown RBP23.49■■□□□ 1.35
SNX4-204ENST00000473417 NYXQ9GZU5 481 aa23.49■■□□□ 1.35
SNX4-204ENST00000473417 CHL1O00533 1208 aa23.48■■□□□ 1.35
SNX4-204ENST00000473417 EIF2S2P20042 333 aaKnown RBP23.48■■□□□ 1.35
SNX4-204ENST00000473417 APLP1P51693 650 aa23.48■■□□□ 1.35
SNX4-204ENST00000473417 GIGYF2Q6Y7W6 1299 aaKnown RBP23.48■■□□□ 1.35
SNX4-204ENST00000473417 TAOK3Q9H2K8 898 aa23.48■■□□□ 1.35
SNX4-204ENST00000473417 GLTPD2A6NH11 291 aa23.47■■□□□ 1.35
SNX4-204ENST00000473417 PROSER3Q2NL68 480 aa23.47■■□□□ 1.35
SNX4-204ENST00000473417 C7orf43Q8WVR3 580 aa23.47■■□□□ 1.35
SNX4-204ENST00000473417 RRAGCQ9HB90 399 aa23.47■■□□□ 1.35
SNX4-204ENST00000473417 GPTP24298 496 aa23.46■■□□□ 1.35
SNX4-204ENST00000473417 GTF2E1P29083 439 aaPredicted RBP23.46■■□□□ 1.35
SNX4-204ENST00000473417 NUTM1Q86Y26 1132 aa23.46■■□□□ 1.35
SNX4-204ENST00000473417 ZNF34Q8IZ26 560 aa23.46■■□□□ 1.35
SNX4-204ENST00000473417 CFAP44Q96MT7 982 aa23.46■■□□□ 1.35
SNX4-204ENST00000473417 CALD1Q05682 793 aaKnown RBP23.45■■□□□ 1.34
SNX4-204ENST00000473417 CCDC27Q2M243 656 aa23.45■■□□□ 1.34
SNX4-204ENST00000473417 CRY2Q49AN0 593 aa23.45■■□□□ 1.34
SNX4-204ENST00000473417 WWC1Q8IX03 1113 aa23.45■■□□□ 1.34
SNX4-204ENST00000473417 ANXA1P04083 346 aa23.44■■□□□ 1.34
SNX4-204ENST00000473417 KRT24Q2M2I5 525 aa23.44■■□□□ 1.34
SNX4-204ENST00000473417 ERFEQ4G0M1 354 aa23.44■■□□□ 1.34
SNX4-204ENST00000473417 CCDC93Q567U6 631 aa23.44■■□□□ 1.34
SNX4-204ENST00000473417 SNED1Q8TER0 1413 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms