RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 CSPP1Q1MSJ5 1256 aa25.42■■□□□ 1.66
COL18A1-207ENST00000473212 ESCO1Q5FWF5 840 aa25.42■■□□□ 1.66
COL18A1-207ENST00000473212 CNPY2Q9Y2B0 182 aa25.42■■□□□ 1.66
COL18A1-207ENST00000473212 PXDNQ92626 1479 aa25.42■■□□□ 1.66
COL18A1-207ENST00000473212 ADCK5Q3MIX3 580 aa25.41■■□□□ 1.66
COL18A1-207ENST00000473212 CNTROBQ8N137 903 aa25.41■■□□□ 1.66
COL18A1-207ENST00000473212 MAP3K2Q9Y2U5 619 aa25.41■■□□□ 1.66
COL18A1-207ENST00000473212 UQCRHLA0A096LP55 91 aa25.4■■□□□ 1.66
COL18A1-207ENST00000473212 UQCRHP07919 91 aa25.4■■□□□ 1.66
COL18A1-207ENST00000473212 MED1Q15648 1581 aaPredicted RBP25.39■■□□□ 1.66
COL18A1-207ENST00000473212 CASTP20810 708 aaKnown RBP25.39■■□□□ 1.65
COL18A1-207ENST00000473212 PSME1Q06323 249 aa25.39■■□□□ 1.65
COL18A1-207ENST00000473212 NFAT5O94916 1531 aa25.39■■□□□ 1.65
COL18A1-207ENST00000473212 ZSCAN22P10073 491 aaPredicted RBP25.38■■□□□ 1.65
COL18A1-207ENST00000473212 FAM13BQ9NYF5 915 aa25.38■■□□□ 1.65
COL18A1-207ENST00000473212 KDM3BQ7LBC6 1761 aa25.38■■□□□ 1.65
COL18A1-207ENST00000473212 TMEM87AQ8NBN3 555 aa25.37■■□□□ 1.65
COL18A1-207ENST00000473212 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP25.37■■□□□ 1.65
COL18A1-207ENST00000473212 LMOD2Q6P5Q4 547 aa25.37■■□□□ 1.65
COL18A1-207ENST00000473212 C9orf78Q9NZ63 289 aaPredicted RBP25.37■■□□□ 1.65
COL18A1-207ENST00000473212 FER1L4A9Z1Z3 1794 aa25.36■■□□□ 1.65
COL18A1-207ENST00000473212 SYT1P21579 422 aa25.36■■□□□ 1.65
COL18A1-207ENST00000473212 PRPF40BQ6NWY9 871 aaKnown RBP25.36■■□□□ 1.65
COL18A1-207ENST00000473212 LIMCH1Q9UPQ0 1083 aa25.36■■□□□ 1.65
COL18A1-207ENST00000473212 AIMP1Q12904 312 aaKnown RBP25.36■■□□□ 1.65
COL18A1-207ENST00000473212 CCDC183Q5T5S1 534 aa25.36■■□□□ 1.65
COL18A1-207ENST00000473212 STX6O43752 255 aa25.35■■□□□ 1.65
COL18A1-207ENST00000473212 AKAP4Q5JQC9 854 aa25.35■■□□□ 1.65
COL18A1-207ENST00000473212 RNMTO43148 476 aaKnown RBP25.35■■□□□ 1.65
COL18A1-207ENST00000473212 CCDC83Q8IWF9 413 aa25.35■■□□□ 1.65
COL18A1-207ENST00000473212 DIAPH3Q9NSV4 1193 aa25.35■■□□□ 1.65
COL18A1-207ENST00000473212 USP54Q70EL1 1684 aa25.35■■□□□ 1.65
COL18A1-207ENST00000473212 ORAI2Q96SN7 254 aa25.34■■□□□ 1.65
COL18A1-207ENST00000473212 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.34■■□□□ 1.65
COL18A1-207ENST00000473212 GIGYF1O75420 1035 aaPredicted RBP25.34■■□□□ 1.65
COL18A1-207ENST00000473212 FAM184AQ8NB25 1140 aa25.34■■□□□ 1.65
COL18A1-207ENST00000473212 KLHDC4Q8TBB5 520 aa25.34■■□□□ 1.65
COL18A1-207ENST00000473212 KAZALD1Q96I82 304 aa25.34■■□□□ 1.65
COL18A1-207ENST00000473212 USP25Q9UHP3 1055 aa25.34■■□□□ 1.65
COL18A1-207ENST00000473212 SMC3Q9UQE7 1217 aa25.34■■□□□ 1.65
COL18A1-207ENST00000473212 CLASRPQ8N2M8 674 aaKnown RBP25.33■■□□□ 1.65
COL18A1-207ENST00000473212 JAKMIP1Q96N16 626 aaKnown RBP25.33■■□□□ 1.65
COL18A1-207ENST00000473212 TLR7Q9NYK1 1049 aaKnown RBP25.33■■□□□ 1.65
COL18A1-207ENST00000473212 DBF4Q9UBU7 674 aaPredicted RBP25.33■■□□□ 1.65
COL18A1-207ENST00000473212 FIBPO43427 364 aa25.33■■□□□ 1.65
COL18A1-207ENST00000473212 GLRX3O76003 335 aaKnown RBP25.33■■□□□ 1.65
COL18A1-207ENST00000473212 KIAA2012Q0VF49 1180 aa25.33■■□□□ 1.65
COL18A1-207ENST00000473212 FAM227BQ96M60 508 aa25.33■■□□□ 1.65
COL18A1-207ENST00000473212 HYPKQ9NX55 129 aa25.33■■□□□ 1.65
COL18A1-207ENST00000473212 HOXB7P09629 217 aa25.32■■□□□ 1.64
COL18A1-207ENST00000473212 ST3GAL1Q11201 340 aa25.32■■□□□ 1.64
COL18A1-207ENST00000473212 AACSQ86V21 672 aa25.32■■□□□ 1.64
COL18A1-207ENST00000473212 SUCLG2Q96I99 432 aa25.32■■□□□ 1.64
COL18A1-207ENST00000473212 ZMYND15Q9H091 742 aa25.32■■□□□ 1.64
COL18A1-207ENST00000473212 CCDC8Q9H0W5 538 aaPredicted RBP25.32■■□□□ 1.64
COL18A1-207ENST00000473212 AXIN2Q9Y2T1 843 aa25.32■■□□□ 1.64
COL18A1-207ENST00000473212 F13A1P00488 732 aa25.32■■□□□ 1.64
COL18A1-207ENST00000473212 UVSSAQ2YD98 709 aa25.32■■□□□ 1.64
COL18A1-207ENST00000473212 SIL1Q9H173 461 aa25.32■■□□□ 1.64
COL18A1-207ENST00000473212 UBE2HP62256 183 aa25.31■■□□□ 1.64
COL18A1-207ENST00000473212 NECAB1Q8N987 351 aa25.31■■□□□ 1.64
COL18A1-207ENST00000473212 ZNF830Q96NB3 372 aaPredicted RBP25.31■■□□□ 1.64
COL18A1-207ENST00000473212 HCLS1P14317 486 aaPredicted RBP25.31■■□□□ 1.64
COL18A1-207ENST00000473212 PLEKHO1Q53GL0 409 aaPredicted RBP25.31■■□□□ 1.64
COL18A1-207ENST00000473212 SASS6Q6UVJ0 657 aa25.31■■□□□ 1.64
COL18A1-207ENST00000473212 TCEANC2Q96MN5 208 aa25.31■■□□□ 1.64
COL18A1-207ENST00000473212 ECHDC1Q9NTX5 307 aa25.31■■□□□ 1.64
COL18A1-207ENST00000473212 SASH1O94885 1247 aa25.3■■□□□ 1.64
COL18A1-207ENST00000473212 TAF6LQ9Y6J9 622 aa25.3■■□□□ 1.64
COL18A1-207ENST00000473212 USP42Q9H9J4 1324 aaKnown RBP25.3■■□□□ 1.64
COL18A1-207ENST00000473212 IFIT2P09913 472 aaKnown RBP25.3■■□□□ 1.64
COL18A1-207ENST00000473212 MTX1Q13505 466 aa25.3■■□□□ 1.64
COL18A1-207ENST00000473212 EAF2Q96CJ1 260 aaPredicted RBP25.3■■□□□ 1.64
COL18A1-207ENST00000473212 TTC41PQ6P2S7 1318 aa25.3■■□□□ 1.64
COL18A1-207ENST00000473212 GCP02774 474 aa25.29■■□□□ 1.64
COL18A1-207ENST00000473212 SLC39A6Q13433 755 aa25.29■■□□□ 1.64
COL18A1-207ENST00000473212 HSP90AB4PQ58FF6 505 aa25.29■■□□□ 1.64
COL18A1-207ENST00000473212 C1orf141Q5JVX7 400 aa25.29■■□□□ 1.64
COL18A1-207ENST00000473212 KSR2Q6VAB6 950 aa25.29■■□□□ 1.64
COL18A1-207ENST00000473212 JARID2Q92833 1246 aaPredicted RBP25.29■■□□□ 1.64
COL18A1-207ENST00000473212 BICC1Q9H694 974 aaKnown RBP25.29■■□□□ 1.64
COL18A1-207ENST00000473212 CRYBG1Q9Y4K1 1723 aa25.29■■□□□ 1.64
COL18A1-207ENST00000473212 ADCY5O95622 1261 aa25.29■■□□□ 1.64
COL18A1-207ENST00000473212 GJB2P29033 226 aa25.29■■□□□ 1.64
COL18A1-207ENST00000473212 LETM1O95202 739 aaPredicted RBP25.28■■□□□ 1.64
COL18A1-207ENST00000473212 ANKRD24Q8TF21 1146 aa25.28■■□□□ 1.64
COL18A1-207ENST00000473212 DNM1Q05193 864 aaKnown RBP25.27■■□□□ 1.64
COL18A1-207ENST00000473212 PDRG1Q9NUG6 133 aa25.27■■□□□ 1.64
COL18A1-207ENST00000473212 LMO7Q8WWI1 1683 aa25.27■■□□□ 1.64
COL18A1-207ENST00000473212 DYNC1I1O14576 645 aa25.27■■□□□ 1.64
COL18A1-207ENST00000473212 PIP4K2AP48426 406 aaPredicted RBP25.27■■□□□ 1.64
COL18A1-207ENST00000473212 ME3Q16798 604 aa25.27■■□□□ 1.64
COL18A1-207ENST00000473212 ATP6V1DQ9Y5K8 247 aa25.27■■□□□ 1.64
COL18A1-207ENST00000473212 EDC3Q96F86 508 aaKnown RBP25.26■■□□□ 1.63
COL18A1-207ENST00000473212 NMIQ13287 307 aaPredicted RBP25.26■■□□□ 1.63
COL18A1-207ENST00000473212 ARHGEF25Q86VW2 580 aa25.26■■□□□ 1.63
COL18A1-207ENST00000473212 DNTTIP2Q5QJE6 756 aaKnown RBP25.25■■□□□ 1.63
COL18A1-207ENST00000473212 RUFY2Q8WXA3 655 aa25.25■■□□□ 1.63
COL18A1-207ENST00000473212 BOLA2Q9H3K6 86 aa25.25■■□□□ 1.63
COL18A1-207ENST00000473212 GIMAP6Q6P9H5 292 aa25.25■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms