RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 KRT76Q01546 638 aa5.49□□□□□ -1.53
XRN1-209ENST00000472625 CCDC155Q8N6L0 562 aa5.49□□□□□ -1.53
XRN1-209ENST00000472625 RNF217Q8TC41 542 aa5.49□□□□□ -1.53
XRN1-209ENST00000472625 UCN2Q96RP3 112 aa5.49□□□□□ -1.53
XRN1-209ENST00000472625 OSBPL3Q9H4L5 887 aa5.49□□□□□ -1.53
XRN1-209ENST00000472625 MED14O60244 1454 aa5.49□□□□□ -1.53
XRN1-209ENST00000472625 SHANK2Q9UPX8 1470 aa5.49□□□□□ -1.53
XRN1-209ENST00000472625 VPS8Q8N3P4 1428 aa5.48□□□□□ -1.53
XRN1-209ENST00000472625 MIA2Q96PC5 1412 aa5.48□□□□□ -1.53
XRN1-209ENST00000472625 MAP3K1Q13233 1512 aa5.48□□□□□ -1.53
XRN1-209ENST00000472625 RNF17Q9BXT8 1623 aaKnown RBP5.48□□□□□ -1.53
XRN1-209ENST00000472625 POLR1AO95602 1720 aaPredicted RBP5.48□□□□□ -1.53
XRN1-209ENST00000472625 MAST1Q9Y2H9 1570 aa5.48□□□□□ -1.53
XRN1-209ENST00000472625 NPHP4O75161 1426 aaPredicted RBP5.48□□□□□ -1.53
XRN1-209ENST00000472625 MYOM3Q5VTT5 1437 aa5.48□□□□□ -1.53
XRN1-209ENST00000472625 ERBINQ96RT1 1412 aa5.48□□□□□ -1.53
XRN1-209ENST00000472625 LRRC9Q6ZRR7 1453 aa5.47□□□□□ -1.53
XRN1-209ENST00000472625 CDC14CA4D256 554 aa5.47□□□□□ -1.53
XRN1-209ENST00000472625 RHOQP17081 205 aa5.47□□□□□ -1.53
XRN1-209ENST00000472625 PTGIRP43119 386 aa5.47□□□□□ -1.53
XRN1-209ENST00000472625 MCCD1P59942 119 aaPredicted RBP5.47□□□□□ -1.53
XRN1-209ENST00000472625 WASHC4Q2M389 1173 aa5.47□□□□□ -1.53
XRN1-209ENST00000472625 CNTNAP3BQ96NU0 1288 aa5.47□□□□□ -1.53
XRN1-209ENST00000472625 CNTNAP3Q9BZ76 1288 aa5.47□□□□□ -1.53
XRN1-209ENST00000472625 HRH3Q9Y5N1 445 aa5.47□□□□□ -1.53
XRN1-209ENST00000472625 ABCC3O15438 1527 aa5.47□□□□□ -1.53
XRN1-209ENST00000472625 DUOX2Q9NRD8 1548 aa5.47□□□□□ -1.53
XRN1-209ENST00000472625 NEURL4Q96JN8 1562 aa5.46□□□□□ -1.53
XRN1-209ENST00000472625 KANK1Q14678 1352 aa5.46□□□□□ -1.54
XRN1-209ENST00000472625 SENP3-EIF4A1A0A087X0R7 540 aa5.46□□□□□ -1.54
XRN1-209ENST00000472625 SLC35F4A4IF30 521 aa5.46□□□□□ -1.54
XRN1-209ENST00000472625 RNFT1Q5M7Z0 435 aa5.46□□□□□ -1.54
XRN1-209ENST00000472625 COL25A1Q9BXS0 654 aaPredicted RBP5.46□□□□□ -1.54
XRN1-209ENST00000472625 ARHGAP31Q2M1Z3 1444 aa5.46□□□□□ -1.54
XRN1-209ENST00000472625 IQGAP1P46940 1657 aa5.46□□□□□ -1.54
XRN1-209ENST00000472625 ZNF644Q9H582 1327 aaPredicted RBP5.46□□□□□ -1.54
XRN1-209ENST00000472625 ERVK-7P63135 1459 aa5.45□□□□□ -1.54
XRN1-209ENST00000472625 SCAF11Q99590 1463 aaKnown RBP5.45□□□□□ -1.54
XRN1-209ENST00000472625 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.45□□□□□ -1.54
XRN1-209ENST00000472625 PRDM15P57071 1507 aaPredicted RBP5.45□□□□□ -1.54
XRN1-209ENST00000472625 A6NJR5 290 aa5.45□□□□□ -1.54
XRN1-209ENST00000472625 MEN1O00255 615 aa5.45□□□□□ -1.54
XRN1-209ENST00000472625 STAU1O95793 577 aaKnown RBP5.45□□□□□ -1.54
XRN1-209ENST00000472625 EIF4G2P78344 907 aaKnown RBP eCLIP5.45□□□□□ -1.54
XRN1-209ENST00000472625 ILDR2Q71H61 639 aa5.45□□□□□ -1.54
XRN1-209ENST00000472625 PRICKLE2Q7Z3G6 844 aa5.45□□□□□ -1.54
XRN1-209ENST00000472625 VWA5B2Q8N398 1253 aa5.45□□□□□ -1.54
XRN1-209ENST00000472625 CUEDC1Q9NWM3 386 aaPredicted RBP5.45□□□□□ -1.54
XRN1-209ENST00000472625 PCDHB11Q9Y5F2 797 aa5.45□□□□□ -1.54
XRN1-209ENST00000472625 EID1Q9Y6B2 187 aa5.45□□□□□ -1.54
XRN1-209ENST00000472625 MED1Q15648 1581 aaPredicted RBP5.45□□□□□ -1.54
XRN1-209ENST00000472625 KIF15Q9NS87 1388 aa5.44□□□□□ -1.54
XRN1-209ENST00000472625 ATP5J2-PTCD1G3V325 749 aa5.44□□□□□ -1.54
XRN1-209ENST00000472625 ITGA6P23229 1130 aa5.44□□□□□ -1.54
XRN1-209ENST00000472625 PIP4K2BP78356 416 aa5.44□□□□□ -1.54
XRN1-209ENST00000472625 CC2D2BQ6DHV5 1058 aa5.44□□□□□ -1.54
XRN1-209ENST00000472625 PROSER2Q86WR7 435 aaPredicted RBP5.44□□□□□ -1.54
XRN1-209ENST00000472625 VWDEQ8N2E2 1590 aa5.44□□□□□ -1.54
XRN1-209ENST00000472625 RAB6BQ9NRW1 208 aa5.44□□□□□ -1.54
XRN1-209ENST00000472625 SLIT1O75093 1534 aa5.43□□□□□ -1.54
XRN1-209ENST00000472625 HSPA1LP34931 641 aa5.43□□□□□ -1.54
XRN1-209ENST00000472625 SOX11P35716 441 aa5.43□□□□□ -1.54
XRN1-209ENST00000472625 ANKRD30AQ9BXX3 1397 aa5.42□□□□□ -1.54
XRN1-209ENST00000472625 A0A1W2PRU2 124 aa5.42□□□□□ -1.54
XRN1-209ENST00000472625 FAM181BA6NEQ2 426 aa5.42□□□□□ -1.54
XRN1-209ENST00000472625 DKK1O94907 266 aa5.42□□□□□ -1.54
XRN1-209ENST00000472625 IL2RAP01589 272 aa5.42□□□□□ -1.54
XRN1-209ENST00000472625 SCNN1DP51172 638 aa5.42□□□□□ -1.54
XRN1-209ENST00000472625 RNF20Q5VTR2 975 aa5.42□□□□□ -1.54
XRN1-209ENST00000472625 LYSMD3Q7Z3D4 306 aa5.42□□□□□ -1.54
XRN1-209ENST00000472625 CCDC125Q86Z20 511 aa5.42□□□□□ -1.54
XRN1-209ENST00000472625 ZNF295-AS1Q8N0V1 137 aa5.42□□□□□ -1.54
XRN1-209ENST00000472625 PLPP7Q8NBV4 271 aa5.42□□□□□ -1.54
XRN1-209ENST00000472625 WHAMMQ8TF30 809 aa5.42□□□□□ -1.54
XRN1-209ENST00000472625 ARHGEF10LQ9HCE6 1279 aa5.42□□□□□ -1.54
XRN1-209ENST00000472625 PRM3Q9NNZ6 103 aa5.42□□□□□ -1.54
XRN1-209ENST00000472625 ZNF330Q9Y3S2 320 aaPredicted RBP5.42□□□□□ -1.54
XRN1-209ENST00000472625 ARHGAP23Q9P227 1491 aa5.42□□□□□ -1.54
XRN1-209ENST00000472625 KDM5AP29375 1690 aaKnown RBP5.42□□□□□ -1.54
XRN1-209ENST00000472625 LMTK2Q8IWU2 1503 aa5.42□□□□□ -1.54
XRN1-209ENST00000472625 LRRC7Q96NW7 1537 aa5.42□□□□□ -1.54
XRN1-209ENST00000472625 NKTRP30414 1462 aaKnown RBP5.41□□□□□ -1.54
XRN1-209ENST00000472625 RPRD2Q5VT52 1461 aaKnown RBP5.41□□□□□ -1.54
XRN1-209ENST00000472625 HDGFL1Q5TGJ6 251 aa5.41□□□□□ -1.54
XRN1-209ENST00000472625 TBC1D9Q6ZT07 1266 aa5.41□□□□□ -1.54
XRN1-209ENST00000472625 SV2AQ7L0J3 742 aa5.41□□□□□ -1.54
XRN1-209ENST00000472625 FHDC1Q9C0D6 1143 aaPredicted RBP5.41□□□□□ -1.54
XRN1-209ENST00000472625 ETNK1Q9HBU6 452 aa5.41□□□□□ -1.54
XRN1-209ENST00000472625 PCDHGA11Q9Y5H2 935 aa5.41□□□□□ -1.54
XRN1-209ENST00000472625 EFCAB6Q5THR3 1501 aa5.41□□□□□ -1.54
XRN1-209ENST00000472625 MROH1Q8NDA8 1641 aa5.41□□□□□ -1.54
XRN1-209ENST00000472625 TMEM2Q9UHN6 1383 aa5.41□□□□□ -1.54
XRN1-209ENST00000472625 TMEM229AB2RXF0 380 aa5.4□□□□□ -1.54
XRN1-209ENST00000472625 GPR25O00155 361 aa5.4□□□□□ -1.54
XRN1-209ENST00000472625 RNF144AP50876 292 aaPredicted RBP5.4□□□□□ -1.54
XRN1-209ENST00000472625 POU4F2Q12837 409 aa5.4□□□□□ -1.54
XRN1-209ENST00000472625 SEMA3FQ13275 785 aa5.4□□□□□ -1.54
XRN1-209ENST00000472625 CLN3Q13286 438 aa5.4□□□□□ -1.54
XRN1-209ENST00000472625 TXNDC2Q86VQ3 553 aa5.4□□□□□ -1.54
XRN1-209ENST00000472625 RNF135Q8IUD6 432 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms