RNA–Protein interactions for RNA: ENST00000472518.1

RTKN-207, Transcript of rhotekin, humanhuman

TSL 1 (best)

Gene RTKN, Length 1,105 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTKN-207ENST00000472518 PLEKHF1Q96S99 279 aa18.5■□□□□ 0.55
RTKN-207ENST00000472518 ARFGEF2Q9Y6D5 1785 aa18.5■□□□□ 0.55
RTKN-207ENST00000472518 PRELPP51888 382 aa18.49■□□□□ 0.55
RTKN-207ENST00000472518 DCTN1Q14203 1278 aa18.49■□□□□ 0.55
RTKN-207ENST00000472518 SOGA3Q5TF21 947 aa18.49■□□□□ 0.55
RTKN-207ENST00000472518 CAPN15O75808 1086 aa18.48■□□□□ 0.55
RTKN-207ENST00000472518 FSTL1Q12841 308 aa18.48■□□□□ 0.55
RTKN-207ENST00000472518 C16orf71Q8IYS4 520 aaPredicted RBP18.48■□□□□ 0.55
RTKN-207ENST00000472518 CNKSR1Q969H4 720 aa18.48■□□□□ 0.55
RTKN-207ENST00000472518 RRAGCQ9HB90 399 aa18.48■□□□□ 0.55
RTKN-207ENST00000472518 COL11A2P13942 1736 aaPredicted RBP18.47■□□□□ 0.55
RTKN-207ENST00000472518 RASSF7Q02833 373 aa18.47■□□□□ 0.55
RTKN-207ENST00000472518 STYK1Q6J9G0 422 aa18.47■□□□□ 0.55
RTKN-207ENST00000472518 DICER1Q9UPY3 1922 aaKnown RBP18.47■□□□□ 0.55
RTKN-207ENST00000472518 FER1L6Q2WGJ9 1857 aa18.46■□□□□ 0.55
RTKN-207ENST00000472518 CCDC88AQ3V6T2 1871 aa18.46■□□□□ 0.55
RTKN-207ENST00000472518 LMOD3Q0VAK6 560 aa18.46■□□□□ 0.55
RTKN-207ENST00000472518 ZNF622Q969S3 477 aaKnown RBP eCLIP18.46■□□□□ 0.55
RTKN-207ENST00000472518 BABAM1Q9NWV8 329 aa18.46■□□□□ 0.55
RTKN-207ENST00000472518 ERBB4Q15303 1308 aa18.46■□□□□ 0.55
RTKN-207ENST00000472518 LTBP3Q9NS15 1303 aa18.46■□□□□ 0.55
RTKN-207ENST00000472518 TIAM2Q8IVF5 1701 aa18.46■□□□□ 0.55
RTKN-207ENST00000472518 TPTE2Q6XPS3 522 aa18.45■□□□□ 0.54
RTKN-207ENST00000472518 NBPF5PQ86XG9 351 aaPredicted RBP18.45■□□□□ 0.54
RTKN-207ENST00000472518 MASTLQ96GX5 879 aa18.45■□□□□ 0.54
RTKN-207ENST00000472518 PRAMEF22A3QJZ6 481 aa18.44■□□□□ 0.54
RTKN-207ENST00000472518 NBPF26B4DH59 902 aa18.43■□□□□ 0.54
RTKN-207ENST00000472518 ERVV-1B6SEH8 477 aa18.43■□□□□ 0.54
RTKN-207ENST00000472518 SRGNP10124 158 aa18.43■□□□□ 0.54
RTKN-207ENST00000472518 EIF4A1P60842 406 aaKnown RBP18.43■□□□□ 0.54
RTKN-207ENST00000472518 NBPF10Q6P3W6 841 aaKnown RBP18.43■□□□□ 0.54
RTKN-207ENST00000472518 NBPF15Q8N660 670 aa18.43■□□□□ 0.54
RTKN-207ENST00000472518 MYBBP1AQ9BQG0 1328 aaKnown RBP18.43■□□□□ 0.54
RTKN-207ENST00000472518 GLTPD2A6NH11 291 aa18.42■□□□□ 0.54
RTKN-207ENST00000472518 NFKBIEO00221 500 aa18.42■□□□□ 0.54
RTKN-207ENST00000472518 NIP7Q9Y221 180 aaKnown RBP eCLIP18.42■□□□□ 0.54
RTKN-207ENST00000472518 IBTKQ9P2D0 1353 aaPredicted RBP18.42■□□□□ 0.54
RTKN-207ENST00000472518 KLRG2A4D1S0 409 aaPredicted RBP18.41■□□□□ 0.54
RTKN-207ENST00000472518 TNS4Q8IZW8 715 aa18.41■□□□□ 0.54
RTKN-207ENST00000472518 NYXQ9GZU5 481 aa18.41■□□□□ 0.54
RTKN-207ENST00000472518 TAOK3Q9H2K8 898 aa18.41■□□□□ 0.54
RTKN-207ENST00000472518 NUP98P52948 1817 aa18.41■□□□□ 0.54
RTKN-207ENST00000472518 CACNA1SQ13698 1873 aa18.41■□□□□ 0.54
RTKN-207ENST00000472518 SLX4Q8IY92 1834 aa18.4■□□□□ 0.54
RTKN-207ENST00000472518 NPR1P16066 1061 aa18.4■□□□□ 0.54
RTKN-207ENST00000472518 PIP4K2AP48426 406 aaPredicted RBP18.4■□□□□ 0.54
RTKN-207ENST00000472518 DPY19L2Q6NUT2 758 aa18.4■□□□□ 0.54
RTKN-207ENST00000472518 KIF6Q6ZMV9 814 aa18.4■□□□□ 0.54
RTKN-207ENST00000472518 RIC1Q4ADV7 1423 aa18.4■□□□□ 0.54
RTKN-207ENST00000472518 C21orf2O43822 256 aa18.39■□□□□ 0.53
RTKN-207ENST00000472518 PRPF40BQ6NWY9 871 aaKnown RBP18.39■□□□□ 0.53
RTKN-207ENST00000472518 SMC1BQ8NDV3 1235 aa18.39■□□□□ 0.53
RTKN-207ENST00000472518 MIS18AQ9NYP9 233 aa18.39■□□□□ 0.53
RTKN-207ENST00000472518 MAP3K15Q6ZN16 1313 aa18.39■□□□□ 0.53
RTKN-207ENST00000472518 VEGFAP15692 232 aaPredicted RBP18.38■□□□□ 0.53
RTKN-207ENST00000472518 GTF2E1P29083 439 aaPredicted RBP18.38■□□□□ 0.53
RTKN-207ENST00000472518 RIPK4P57078 832 aa18.38■□□□□ 0.53
RTKN-207ENST00000472518 TSPYL4Q9UJ04 414 aa18.38■□□□□ 0.53
RTKN-207ENST00000472518 ALDH1B1P30837 517 aa18.37■□□□□ 0.53
RTKN-207ENST00000472518 CCDC93Q567U6 631 aa18.37■□□□□ 0.53
RTKN-207ENST00000472518 POTECB2RU33 542 aa18.36■□□□□ 0.53
RTKN-207ENST00000472518 HSPA1AP0DMV8 641 aaKnown RBP18.36■□□□□ 0.53
RTKN-207ENST00000472518 HSPA1BP0DMV9 641 aaKnown RBP18.36■□□□□ 0.53
RTKN-207ENST00000472518 TMPOP42166 694 aaKnown RBP18.36■□□□□ 0.53
RTKN-207ENST00000472518 ERFEQ4G0M1 354 aa18.36■□□□□ 0.53
RTKN-207ENST00000472518 CCDC24Q8N4L8 307 aa18.36■□□□□ 0.53
RTKN-207ENST00000472518 DDX10Q13206 875 aaKnown RBP18.35■□□□□ 0.53
RTKN-207ENST00000472518 WDR43Q15061 677 aaKnown RBP eCLIP18.35■□□□□ 0.53
RTKN-207ENST00000472518 THUMPD2Q9BTF0 503 aaKnown RBP18.35■□□□□ 0.53
RTKN-207ENST00000472518 RRP7AQ9Y3A4 280 aaKnown RBP18.35■□□□□ 0.53
RTKN-207ENST00000472518 HLFQ16534 295 aa18.34■□□□□ 0.53
RTKN-207ENST00000472518 GRIPAP1Q4V328 841 aa18.34■□□□□ 0.53
RTKN-207ENST00000472518 RTKN2Q8IZC4 609 aa18.34■□□□□ 0.53
RTKN-207ENST00000472518 C7orf43Q8WVR3 580 aa18.34■□□□□ 0.53
RTKN-207ENST00000472518 RNF123Q5XPI4 1314 aa18.33■□□□□ 0.53
RTKN-207ENST00000472518 CRY2Q49AN0 593 aa18.33■□□□□ 0.52
RTKN-207ENST00000472518 PARP10Q53GL7 1025 aa18.33■□□□□ 0.52
RTKN-207ENST00000472518 CC2D2BQ6DHV5 1058 aa18.33■□□□□ 0.52
RTKN-207ENST00000472518 GIGYF2Q6Y7W6 1299 aaKnown RBP18.33■□□□□ 0.52
RTKN-207ENST00000472518 RUNDC1Q96C34 613 aa18.33■□□□□ 0.52
RTKN-207ENST00000472518 MYL6BP14649 208 aa18.32■□□□□ 0.52
RTKN-207ENST00000472518 FKBP4Q02790 459 aaKnown RBP eCLIP18.32■□□□□ 0.52
RTKN-207ENST00000472518 ZNF219Q9P2Y4 722 aaPredicted RBP18.32■□□□□ 0.52
RTKN-207ENST00000472518 SCN4AP35499 1836 aa18.31■□□□□ 0.52
RTKN-207ENST00000472518 HSP90AB3PQ58FF7 597 aa18.31■□□□□ 0.52
RTKN-207ENST00000472518 PPP1R42Q7Z4L9 355 aa18.31■□□□□ 0.52
RTKN-207ENST00000472518 NGEFQ8N5V2 710 aa18.31■□□□□ 0.52
RTKN-207ENST00000472518 HOXB7P09629 217 aa18.3■□□□□ 0.52
RTKN-207ENST00000472518 TTLL7Q6ZT98 887 aa18.3■□□□□ 0.52
RTKN-207ENST00000472518 ZNF34Q8IZ26 560 aa18.3■□□□□ 0.52
RTKN-207ENST00000472518 IQCA1LA6NCM1 817 aa18.29■□□□□ 0.52
RTKN-207ENST00000472518 FAM177BA6PVY3 158 aa18.29■□□□□ 0.52
RTKN-207ENST00000472518 HOXA10P31260 410 aaPredicted RBP18.29■□□□□ 0.52
RTKN-207ENST00000472518 ZBTB3Q9H5J0 574 aa18.29■□□□□ 0.52
RTKN-207ENST00000472518 ANKRD36CQ5JPF3 1778 aa18.29■□□□□ 0.52
RTKN-207ENST00000472518 ABCC12Q96J65 1359 aa18.29■□□□□ 0.52
RTKN-207ENST00000472518 POTEIP0CG38 1075 aa18.28■□□□□ 0.52
RTKN-207ENST00000472518 POTEJP0CG39 1038 aa18.28■□□□□ 0.52
RTKN-207ENST00000472518 RPGRQ92834 1020 aaKnown RBP18.28■□□□□ 0.52
RTKN-207ENST00000472518 PSMD1Q99460 953 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms