RNA–Protein interactions for RNA: ENST00000472155.5

UBXN11-213, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,646 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-213ENST00000472155 NEURL1BA8MQ27 555 aa18.32■□□□□ 0.52
UBXN11-213ENST00000472155 BAG4O95429 457 aaKnown RBP18.32■□□□□ 0.52
UBXN11-213ENST00000472155 LARP6Q9BRS8 491 aaKnown RBP18.32■□□□□ 0.52
UBXN11-213ENST00000472155 CCDC8Q9H0W5 538 aaPredicted RBP18.32■□□□□ 0.52
UBXN11-213ENST00000472155 AOX1Q06278 1338 aa18.32■□□□□ 0.52
UBXN11-213ENST00000472155 ATP5J2-PTCD1G3V325 749 aa18.32■□□□□ 0.52
UBXN11-213ENST00000472155 PTCD1O75127 700 aaKnown RBP18.32■□□□□ 0.52
UBXN11-213ENST00000472155 XRCC6P12956 609 aaKnown RBP eCLIP18.32■□□□□ 0.52
UBXN11-213ENST00000472155 CHMP4AQ9BY43 222 aa18.32■□□□□ 0.52
UBXN11-213ENST00000472155 DCAF5Q96JK2 942 aa18.31■□□□□ 0.52
UBXN11-213ENST00000472155 GBP4Q96PP9 640 aa18.31■□□□□ 0.52
UBXN11-213ENST00000472155 CYP2E1P05181 493 aaPredicted RBP18.31■□□□□ 0.52
UBXN11-213ENST00000472155 AACSQ86V21 672 aa18.31■□□□□ 0.52
UBXN11-213ENST00000472155 EAF2Q96CJ1 260 aaPredicted RBP18.31■□□□□ 0.52
UBXN11-213ENST00000472155 FSD2A1L4K1 749 aa18.3■□□□□ 0.52
UBXN11-213ENST00000472155 SGSM2O43147 1006 aa18.3■□□□□ 0.52
UBXN11-213ENST00000472155 DDX58O95786 925 aaKnown RBP18.3■□□□□ 0.52
UBXN11-213ENST00000472155 RASEFQ8IZ41 740 aa18.3■□□□□ 0.52
UBXN11-213ENST00000472155 TTC5Q8N0Z6 440 aa18.3■□□□□ 0.52
UBXN11-213ENST00000472155 CABP4P57796 275 aa18.3■□□□□ 0.52
UBXN11-213ENST00000472155 GCKRQ14397 625 aa18.3■□□□□ 0.52
UBXN11-213ENST00000472155 GAS2L3Q86XJ1 694 aa18.3■□□□□ 0.52
UBXN11-213ENST00000472155 CLASRPQ8N2M8 674 aaKnown RBP18.3■□□□□ 0.52
UBXN11-213ENST00000472155 PRDM11Q9NQV5 511 aa18.3■□□□□ 0.52
UBXN11-213ENST00000472155 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.3■□□□□ 0.52
UBXN11-213ENST00000472155 EIF5BO60841 1220 aaKnown RBP18.29■□□□□ 0.52
UBXN11-213ENST00000472155 CPA1P15085 419 aa18.29■□□□□ 0.52
UBXN11-213ENST00000472155 UTYO14607 1347 aa18.29■□□□□ 0.52
UBXN11-213ENST00000472155 SNRPA1P09661 255 aaKnown RBP18.29■□□□□ 0.52
UBXN11-213ENST00000472155 MCTP1Q6DN14 999 aa18.29■□□□□ 0.52
UBXN11-213ENST00000472155 ANKRD13DQ6ZTN6 518 aa18.29■□□□□ 0.52
UBXN11-213ENST00000472155 LARP1Q6PKG0 1096 aaKnown RBP18.28■□□□□ 0.52
UBXN11-213ENST00000472155 TOM1L2Q6ZVM7 507 aa18.28■□□□□ 0.52
UBXN11-213ENST00000472155 METTL22Q9BUU2 404 aaPredicted RBP18.28■□□□□ 0.52
UBXN11-213ENST00000472155 LSG1Q9H089 658 aaKnown RBP18.28■□□□□ 0.52
UBXN11-213ENST00000472155 GOLGA6L3A6NEY3 463 aa18.28■□□□□ 0.52
UBXN11-213ENST00000472155 HSPA4P34932 840 aa18.27■□□□□ 0.52
UBXN11-213ENST00000472155 PTH1RQ03431 593 aa18.27■□□□□ 0.52
UBXN11-213ENST00000472155 COL9A3Q14050 684 aaPredicted RBP18.27■□□□□ 0.52
UBXN11-213ENST00000472155 HSP90AB4PQ58FF6 505 aa18.27■□□□□ 0.52
UBXN11-213ENST00000472155 CNTROBQ8N137 903 aa18.27■□□□□ 0.52
UBXN11-213ENST00000472155 DDX54Q8TDD1 881 aaKnown RBP18.27■□□□□ 0.52
UBXN11-213ENST00000472155 LMTK3Q96Q04 1460 aa18.27■□□□□ 0.51
UBXN11-213ENST00000472155 NBPF26B4DH59 902 aa18.27■□□□□ 0.51
UBXN11-213ENST00000472155 IFIT2P09913 472 aaKnown RBP18.27■□□□□ 0.51
UBXN11-213ENST00000472155 NBPF14Q5TI25 921 aa18.27■□□□□ 0.51
UBXN11-213ENST00000472155 NBPF10Q6P3W6 841 aaKnown RBP18.27■□□□□ 0.51
UBXN11-213ENST00000472155 NBPF15Q8N660 670 aa18.27■□□□□ 0.51
UBXN11-213ENST00000472155 STRN4Q9NRL3 753 aa18.27■□□□□ 0.51
UBXN11-213ENST00000472155 ECHDC1Q9NTX5 307 aa18.27■□□□□ 0.51
UBXN11-213ENST00000472155 USP42Q9H9J4 1324 aaKnown RBP18.27■□□□□ 0.51
UBXN11-213ENST00000472155 CPDO75976 1380 aa18.26■□□□□ 0.51
UBXN11-213ENST00000472155 UBE3BQ7Z3V4 1068 aa18.26■□□□□ 0.51
UBXN11-213ENST00000472155 EDC3Q96F86 508 aaKnown RBP18.26■□□□□ 0.51
UBXN11-213ENST00000472155 FMNL2Q96PY5 1086 aa18.26■□□□□ 0.51
UBXN11-213ENST00000472155 SLAIN2Q9P270 581 aa18.26■□□□□ 0.51
UBXN11-213ENST00000472155 NDUFB9Q9Y6M9 179 aa18.26■□□□□ 0.51
UBXN11-213ENST00000472155 SNX14Q9Y5W7 946 aa18.26■□□□□ 0.51
UBXN11-213ENST00000472155 GLI3P10071 1580 aa18.26■□□□□ 0.51
UBXN11-213ENST00000472155 GLRX3O76003 335 aaKnown RBP18.25■□□□□ 0.51
UBXN11-213ENST00000472155 MCCP23508 829 aa18.25■□□□□ 0.51
UBXN11-213ENST00000472155 PKD1L3Q7Z443 1732 aa18.25■□□□□ 0.51
UBXN11-213ENST00000472155 RAD50Q92878 1312 aa18.25■□□□□ 0.51
UBXN11-213ENST00000472155 NEXNQ0ZGT2 675 aa18.25■□□□□ 0.51
UBXN11-213ENST00000472155 TTLL7Q6ZT98 887 aa18.25■□□□□ 0.51
UBXN11-213ENST00000472155 FAM227BQ96M60 508 aa18.25■□□□□ 0.51
UBXN11-213ENST00000472155 MRC1P22897 1456 aa18.25■□□□□ 0.51
UBXN11-213ENST00000472155 A1BGP04217 495 aa18.24■□□□□ 0.51
UBXN11-213ENST00000472155 CHGBP05060 677 aa18.24■□□□□ 0.51
UBXN11-213ENST00000472155 G3BP1Q13283 466 aaKnown RBP eCLIP18.24■□□□□ 0.51
UBXN11-213ENST00000472155 BOLA2Q9H3K6 86 aa18.24■□□□□ 0.51
UBXN11-213ENST00000472155 TTC41PQ6P2S7 1318 aa18.24■□□□□ 0.51
UBXN11-213ENST00000472155 CLEC17AQ6ZS10 378 aa18.24■□□□□ 0.51
UBXN11-213ENST00000472155 WDR17Q8IZU2 1322 aa18.24■□□□□ 0.51
UBXN11-213ENST00000472155 FOXD4L6Q3SYB3 417 aaPredicted RBP18.23■□□□□ 0.51
UBXN11-213ENST00000472155 FOXD4L3Q6VB84 417 aaPredicted RBP18.23■□□□□ 0.51
UBXN11-213ENST00000472155 ZCRB1Q8TBF4 217 aaKnown RBP18.23■□□□□ 0.51
UBXN11-213ENST00000472155 STRCQ7RTU9 1775 aa18.23■□□□□ 0.51
UBXN11-213ENST00000472155 ANAPC15P60006 121 aa18.23■□□□□ 0.51
UBXN11-213ENST00000472155 NUCB2P80303 420 aa18.23■□□□□ 0.51
UBXN11-213ENST00000472155 ADCK5Q3MIX3 580 aa18.22■□□□□ 0.51
UBXN11-213ENST00000472155 DIAPH3Q9NSV4 1193 aa18.22■□□□□ 0.51
UBXN11-213ENST00000472155 KDM4FA0A1W2PPD8 638 aa18.22■□□□□ 0.51
UBXN11-213ENST00000472155 CCDC9Q9Y3X0 531 aaKnown RBP18.22■□□□□ 0.51
UBXN11-213ENST00000472155 A0A087WZG4 1122 aa18.21■□□□□ 0.51
UBXN11-213ENST00000472155 RFX5P48382 616 aaPredicted RBP18.21■□□□□ 0.51
UBXN11-213ENST00000472155 CUL4AQ13619 759 aa18.21■□□□□ 0.51
UBXN11-213ENST00000472155 CWC22Q9HCG8 908 aaKnown RBP18.21■□□□□ 0.51
UBXN11-213ENST00000472155 LMBRD1Q9NUN5 540 aa18.21■□□□□ 0.51
UBXN11-213ENST00000472155 DDX49Q9Y6V7 483 aaKnown RBP18.21■□□□□ 0.51
UBXN11-213ENST00000472155 SOS2Q07890 1332 aaPredicted RBP18.21■□□□□ 0.51
UBXN11-213ENST00000472155 PTPN12Q05209 780 aaKnown RBP18.21■□□□□ 0.51
UBXN11-213ENST00000472155 COL5A2P05997 1499 aaPredicted RBP18.21■□□□□ 0.51
UBXN11-213ENST00000472155 L1TD1Q5T7N2 865 aaKnown RBP18.2■□□□□ 0.5
UBXN11-213ENST00000472155 ERC1Q8IUD2 1116 aa18.2■□□□□ 0.5
UBXN11-213ENST00000472155 NSFL1CQ9UNZ2 370 aaKnown RBP18.2■□□□□ 0.5
UBXN11-213ENST00000472155 AFDNP55196 1824 aaKnown RBP18.2■□□□□ 0.5
UBXN11-213ENST00000472155 PRPF40AO75400 957 aaKnown RBP18.2■□□□□ 0.5
UBXN11-213ENST00000472155 TAF6LQ9Y6J9 622 aa18.2■□□□□ 0.5
UBXN11-213ENST00000472155 NCLP19338 710 aaKnown RBP18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms