RNA–Protein interactions for RNA: ENST00000471701.1

PRPF40A-207, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 293 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-207ENST00000471701 MSTNO14793 375 aa7.59□□□□□ -1.19
PRPF40A-207ENST00000471701 RHPN1Q8TCX5 695 aa7.59□□□□□ -1.19
PRPF40A-207ENST00000471701 ZNF594Q96JF6 807 aaPredicted RBP7.59□□□□□ -1.19
PRPF40A-207ENST00000471701 TSPAN10Q9H1Z9 355 aaPredicted RBP7.59□□□□□ -1.19
PRPF40A-207ENST00000471701 A6NJR5 290 aa7.58□□□□□ -1.2
PRPF40A-207ENST00000471701 SFI1A8K8P3 1242 aa7.58□□□□□ -1.2
PRPF40A-207ENST00000471701 ALAS2P22557 587 aa7.58□□□□□ -1.2
PRPF40A-207ENST00000471701 PCBP4P57723 403 aaKnown RBP7.58□□□□□ -1.2
PRPF40A-207ENST00000471701 PLA2G4EQ3MJ16 856 aa7.58□□□□□ -1.2
PRPF40A-207ENST00000471701 C1orf53Q5VUE5 145 aa7.58□□□□□ -1.2
PRPF40A-207ENST00000471701 ALYREFQ86V81 257 aaKnown RBP7.58□□□□□ -1.2
PRPF40A-207ENST00000471701 SIX5Q8N196 739 aa7.58□□□□□ -1.2
PRPF40A-207ENST00000471701 ATAD2Q6PL18 1390 aa7.58□□□□□ -1.2
PRPF40A-207ENST00000471701 PPP1R12BO60237 982 aaPredicted RBP7.57□□□□□ -1.2
PRPF40A-207ENST00000471701 SEC13P55735 322 aa7.57□□□□□ -1.2
PRPF40A-207ENST00000471701 SUZ12Q15022 739 aaKnown RBP7.57□□□□□ -1.2
PRPF40A-207ENST00000471701 TSEN2Q8NCE0 465 aaKnown RBP7.57□□□□□ -1.2
PRPF40A-207ENST00000471701 HINFPQ9BQA5 517 aa7.57□□□□□ -1.2
PRPF40A-207ENST00000471701 GNB5O14775 395 aa7.56□□□□□ -1.2
PRPF40A-207ENST00000471701 EFSO43281 561 aa7.56□□□□□ -1.2
PRPF40A-207ENST00000471701 SH3PXD2AQ5TCZ1 1133 aa7.56□□□□□ -1.2
PRPF40A-207ENST00000471701 ZNF468Q5VIY5 522 aaPredicted RBP7.56□□□□□ -1.2
PRPF40A-207ENST00000471701 LINC00114Q6XXX2 140 aa7.56□□□□□ -1.2
PRPF40A-207ENST00000471701 CHSY3Q70JA7 882 aa7.56□□□□□ -1.2
PRPF40A-207ENST00000471701 GAS2L2Q8NHY3 880 aa7.56□□□□□ -1.2
PRPF40A-207ENST00000471701 PHACTR1Q9C0D0 580 aa7.56□□□□□ -1.2
PRPF40A-207ENST00000471701 VRTNQ9H8Y1 702 aa7.56□□□□□ -1.2
PRPF40A-207ENST00000471701 STRN4Q9NRL3 753 aa7.56□□□□□ -1.2
PRPF40A-207ENST00000471701 KLF15Q9UIH9 416 aa7.56□□□□□ -1.2
PRPF40A-207ENST00000471701 MAFBQ9Y5Q3 323 aaPredicted RBP7.56□□□□□ -1.2
PRPF40A-207ENST00000471701 NEUROD1Q13562 356 aa7.55□□□□□ -1.2
PRPF40A-207ENST00000471701 GRIN2CQ14957 1233 aa7.55□□□□□ -1.2
PRPF40A-207ENST00000471701 SYT9Q86SS6 491 aa7.55□□□□□ -1.2
PRPF40A-207ENST00000471701 CHMP7Q8WUX9 453 aaPredicted RBP7.55□□□□□ -1.2
PRPF40A-207ENST00000471701 C7orf43Q8WVR3 580 aa7.55□□□□□ -1.2
PRPF40A-207ENST00000471701 SCG3Q8WXD2 468 aaKnown RBP7.55□□□□□ -1.2
PRPF40A-207ENST00000471701 CEP63Q96MT8 703 aa7.55□□□□□ -1.2
PRPF40A-207ENST00000471701 PPP1R12CQ9BZL4 782 aa7.55□□□□□ -1.2
PRPF40A-207ENST00000471701 HCN2Q9UL51 889 aa7.55□□□□□ -1.2
PRPF40A-207ENST00000471701 LMOD1P29536 600 aaPredicted RBP7.54□□□□□ -1.2
PRPF40A-207ENST00000471701 HIRAP54198 1017 aaPredicted RBP7.54□□□□□ -1.2
PRPF40A-207ENST00000471701 SFSWAPQ12872 951 aaKnown RBP7.54□□□□□ -1.2
PRPF40A-207ENST00000471701 FCHSD1Q86WN1 690 aa7.54□□□□□ -1.2
PRPF40A-207ENST00000471701 NOP53Q9NZM5 478 aaKnown RBP7.54□□□□□ -1.2
PRPF40A-207ENST00000471701 HIF1AQ16665 826 aa7.53□□□□□ -1.2
PRPF40A-207ENST00000471701 ELOA3CA0A087WX78 387 aaPredicted RBP7.52□□□□□ -1.21
PRPF40A-207ENST00000471701 KRBA1A5PL33 1030 aa7.52□□□□□ -1.21
PRPF40A-207ENST00000471701 ELOA3DA6NLF2 546 aaPredicted RBP7.52□□□□□ -1.21
PRPF40A-207ENST00000471701 DKK1O94907 266 aa7.52□□□□□ -1.21
PRPF40A-207ENST00000471701 HOXB4P17483 251 aaPredicted RBP7.52□□□□□ -1.21
PRPF40A-207ENST00000471701 ELOA3BQ3SY89 546 aa7.52□□□□□ -1.21
PRPF40A-207ENST00000471701 ALDH16A1Q8IZ83 802 aa7.52□□□□□ -1.21
PRPF40A-207ENST00000471701 STAG2Q8N3U4 1231 aa7.52□□□□□ -1.21
PRPF40A-207ENST00000471701 ELOA3Q8NG57 546 aa7.52□□□□□ -1.21
PRPF40A-207ENST00000471701 NGLY1Q96IV0 654 aa7.52□□□□□ -1.21
PRPF40A-207ENST00000471701 SUSD3Q96L08 255 aa7.52□□□□□ -1.21
PRPF40A-207ENST00000471701 SPOCK3Q9BQ16 436 aa7.52□□□□□ -1.21
PRPF40A-207ENST00000471701 SUV39H2Q9H5I1 410 aa7.52□□□□□ -1.21
PRPF40A-207ENST00000471701 BRD7Q9NPI1 651 aa7.52□□□□□ -1.21
PRPF40A-207ENST00000471701 KCNH4Q9UQ05 1017 aa7.52□□□□□ -1.21
PRPF40A-207ENST00000471701 C21orf2O43822 256 aa7.51□□□□□ -1.21
PRPF40A-207ENST00000471701 SIN3BO75182 1162 aa7.51□□□□□ -1.21
PRPF40A-207ENST00000471701 COL8A1P27658 744 aa7.51□□□□□ -1.21
PRPF40A-207ENST00000471701 DGKGP49619 791 aa7.51□□□□□ -1.21
PRPF40A-207ENST00000471701 DPYDQ12882 1025 aa7.51□□□□□ -1.21
PRPF40A-207ENST00000471701 KANK4Q5T7N3 995 aaPredicted RBP7.51□□□□□ -1.21
PRPF40A-207ENST00000471701 HSH2DQ96JZ2 352 aa7.51□□□□□ -1.21
PRPF40A-207ENST00000471701 C2orf49Q9BVC5 232 aaPredicted RBP7.51□□□□□ -1.21
PRPF40A-207ENST00000471701 SPEM2Q0P670 501 aa7.5□□□□□ -1.21
PRPF40A-207ENST00000471701 PTK7Q13308 1070 aa7.5□□□□□ -1.21
PRPF40A-207ENST00000471701 POTEAQ6S8J7 498 aa7.5□□□□□ -1.21
PRPF40A-207ENST00000471701 ANKMY2Q8IV38 441 aa7.5□□□□□ -1.21
PRPF40A-207ENST00000471701 SLC30A3Q99726 388 aa7.5□□□□□ -1.21
PRPF40A-207ENST00000471701 ZNF777Q9ULD5 760 aaPredicted RBP7.5□□□□□ -1.21
PRPF40A-207ENST00000471701 FAM196BA6NMK8 535 aa7.49□□□□□ -1.21
PRPF40A-207ENST00000471701 CRTC2Q53ET0 693 aaPredicted RBP7.49□□□□□ -1.21
PRPF40A-207ENST00000471701 ZNF280CQ8ND82 737 aa7.49□□□□□ -1.21
PRPF40A-207ENST00000471701 PLVAPQ9BX97 442 aa7.49□□□□□ -1.21
PRPF40A-207ENST00000471701 SPDYE3A6NKU9 549 aa7.48□□□□□ -1.21
PRPF40A-207ENST00000471701 ADARB2-AS1A8MUL3 147 aa7.48□□□□□ -1.21
PRPF40A-207ENST00000471701 ITGB2P05107 769 aa7.48□□□□□ -1.21
PRPF40A-207ENST00000471701 RFX1P22670 979 aa7.48□□□□□ -1.21
PRPF40A-207ENST00000471701 KCNQ4P56696 695 aa7.48□□□□□ -1.21
PRPF40A-207ENST00000471701 USP17L15C9J2P7 530 aa7.47□□□□□ -1.21
PRPF40A-207ENST00000471701 USP17L10C9JJH3 530 aa7.47□□□□□ -1.21
PRPF40A-207ENST00000471701 USP17L13C9JLJ4 530 aa7.47□□□□□ -1.21
PRPF40A-207ENST00000471701 USP17L12C9JPN9 530 aa7.47□□□□□ -1.21
PRPF40A-207ENST00000471701 USP17L11C9JVI0 530 aa7.47□□□□□ -1.21
PRPF40A-207ENST00000471701 USP17L21D6R901 530 aa7.47□□□□□ -1.21
PRPF40A-207ENST00000471701 USP17L18D6R9N7 530 aa7.47□□□□□ -1.21
PRPF40A-207ENST00000471701 USP17L22D6RA61 530 aa7.47□□□□□ -1.21
PRPF40A-207ENST00000471701 USP17L17D6RBQ6 530 aa7.47□□□□□ -1.21
PRPF40A-207ENST00000471701 USP17L19D6RCP7 530 aa7.47□□□□□ -1.21
PRPF40A-207ENST00000471701 USP17L20D6RJB6 530 aa7.47□□□□□ -1.21
PRPF40A-207ENST00000471701 LGR5O75473 907 aa7.47□□□□□ -1.21
PRPF40A-207ENST00000471701 USP17L24Q0WX57 530 aa7.47□□□□□ -1.21
PRPF40A-207ENST00000471701 BTLAQ7Z6A9 289 aa7.47□□□□□ -1.21
PRPF40A-207ENST00000471701 TNFRSF25Q93038 417 aa7.47□□□□□ -1.21
PRPF40A-207ENST00000471701 VTI1AQ96AJ9 217 aa7.47□□□□□ -1.21
PRPF40A-207ENST00000471701 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 229.5 ms