RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 RIC3Q7Z5B4 369 aa24.4■■□□□ 1.5
PSPC1-203ENST00000471658 FTSJ3Q8IY81 847 aaKnown RBP24.4■■□□□ 1.5
PSPC1-203ENST00000471658 ABCC4O15439 1325 aa24.39■■□□□ 1.5
PSPC1-203ENST00000471658 PHF14O94880 888 aa24.39■■□□□ 1.5
PSPC1-203ENST00000471658 DZIP3Q86Y13 1208 aaKnown RBP24.39■■□□□ 1.5
PSPC1-203ENST00000471658 TMEM57Q8N5G2 664 aa24.39■■□□□ 1.5
PSPC1-203ENST00000471658 AKT1S1Q96B36 256 aa24.39■■□□□ 1.5
PSPC1-203ENST00000471658 RTCBQ9Y3I0 505 aaKnown RBP24.39■■□□□ 1.5
PSPC1-203ENST00000471658 COL15A1P39059 1388 aa24.39■■□□□ 1.49
PSPC1-203ENST00000471658 NPM2Q86SE8 214 aaKnown RBP24.39■■□□□ 1.49
PSPC1-203ENST00000471658 PLBD2Q8NHP8 589 aa24.39■■□□□ 1.49
PSPC1-203ENST00000471658 DNAAF4Q8WXU2 420 aa24.39■■□□□ 1.49
PSPC1-203ENST00000471658 COG6Q9Y2V7 657 aa24.39■■□□□ 1.49
PSPC1-203ENST00000471658 CRBNQ96SW2 442 aa24.38■■□□□ 1.49
PSPC1-203ENST00000471658 KIF6Q6ZMV9 814 aa24.37■■□□□ 1.49
PSPC1-203ENST00000471658 ARHGEF1Q92888 912 aaKnown RBP24.37■■□□□ 1.49
PSPC1-203ENST00000471658 ANO8Q9HCE9 1232 aaPredicted RBP24.37■■□□□ 1.49
PSPC1-203ENST00000471658 MAP3K15Q6ZN16 1313 aa24.36■■□□□ 1.49
PSPC1-203ENST00000471658 HLFQ16534 295 aa24.36■■□□□ 1.49
PSPC1-203ENST00000471658 MS4A1P11836 297 aa24.35■■□□□ 1.49
PSPC1-203ENST00000471658 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.35■■□□□ 1.49
PSPC1-203ENST00000471658 MYD88Q99836 296 aa24.35■■□□□ 1.49
PSPC1-203ENST00000471658 TFCP2L1Q9NZI6 479 aa24.35■■□□□ 1.49
PSPC1-203ENST00000471658 SRP68Q9UHB9 627 aaKnown RBP24.35■■□□□ 1.49
PSPC1-203ENST00000471658 CAMTA2O94983 1202 aa24.34■■□□□ 1.49
PSPC1-203ENST00000471658 FKBP8Q14318 412 aa24.34■■□□□ 1.49
PSPC1-203ENST00000471658 TRAPPC3LQ5T215 181 aa24.34■■□□□ 1.49
PSPC1-203ENST00000471658 BEND3Q5T5X7 828 aa24.34■■□□□ 1.49
PSPC1-203ENST00000471658 ITPRIPQ8IWB1 547 aa24.34■■□□□ 1.49
PSPC1-203ENST00000471658 EXOC6Q8TAG9 804 aa24.34■■□□□ 1.49
PSPC1-203ENST00000471658 METTL22Q9BUU2 404 aaPredicted RBP24.34■■□□□ 1.49
PSPC1-203ENST00000471658 A0A087WZG4 1122 aa24.33■■□□□ 1.49
PSPC1-203ENST00000471658 NEFLP07196 543 aa24.33■■□□□ 1.49
PSPC1-203ENST00000471658 INTS3Q68E01 1043 aaKnown RBP24.33■■□□□ 1.49
PSPC1-203ENST00000471658 UBR3Q6ZT12 1888 aa24.32■■□□□ 1.48
PSPC1-203ENST00000471658 HMGB2P26583 209 aaKnown RBP24.32■■□□□ 1.48
PSPC1-203ENST00000471658 MVPQ14764 893 aaKnown RBP24.32■■□□□ 1.48
PSPC1-203ENST00000471658 ATP5J2-PTCD1G3V325 749 aa24.32■■□□□ 1.48
PSPC1-203ENST00000471658 IGKV5-2P06315 115 aa24.32■■□□□ 1.48
PSPC1-203ENST00000471658 CWF19L2Q2TBE0 894 aaKnown RBP24.32■■□□□ 1.48
PSPC1-203ENST00000471658 NUP188Q5SRE5 1749 aa24.31■■□□□ 1.48
PSPC1-203ENST00000471658 ERVV-1B6SEH8 477 aa24.31■■□□□ 1.48
PSPC1-203ENST00000471658 USPL1Q5W0Q7 1092 aa24.31■■□□□ 1.48
PSPC1-203ENST00000471658 GIGYF2Q6Y7W6 1299 aaKnown RBP24.31■■□□□ 1.48
PSPC1-203ENST00000471658 ARFGEF2Q9Y6D5 1785 aa24.3■■□□□ 1.48
PSPC1-203ENST00000471658 SSFA2P28290 1259 aa24.3■■□□□ 1.48
PSPC1-203ENST00000471658 RFC4P35249 363 aa24.3■■□□□ 1.48
PSPC1-203ENST00000471658 CCT4P50991 539 aaKnown RBP24.3■■□□□ 1.48
PSPC1-203ENST00000471658 SLC15A2Q16348 729 aa24.3■■□□□ 1.48
PSPC1-203ENST00000471658 SRCIN1Q9C0H9 1055 aa24.3■■□□□ 1.48
PSPC1-203ENST00000471658 BCL2L12Q9HB09 334 aa24.3■■□□□ 1.48
PSPC1-203ENST00000471658 NARFQ9UHQ1 456 aa24.3■■□□□ 1.48
PSPC1-203ENST00000471658 TCIRG1Q13488 830 aa24.29■■□□□ 1.48
PSPC1-203ENST00000471658 STK32BQ9NY57 414 aa24.29■■□□□ 1.48
PSPC1-203ENST00000471658 ADRA2BP18089 450 aa24.28■■□□□ 1.48
PSPC1-203ENST00000471658 COL23A1Q86Y22 540 aaPredicted RBP24.28■■□□□ 1.48
PSPC1-203ENST00000471658 ZPR1O75312 459 aa24.28■■□□□ 1.48
PSPC1-203ENST00000471658 NEXNQ0ZGT2 675 aa24.28■■□□□ 1.48
PSPC1-203ENST00000471658 LINS1Q8NG48 757 aa24.28■■□□□ 1.48
PSPC1-203ENST00000471658 PXDNLA1KZ92 1463 aa24.27■■□□□ 1.48
PSPC1-203ENST00000471658 ATP10DQ9P241 1426 aa24.27■■□□□ 1.48
PSPC1-203ENST00000471658 NEURL1BA8MQ27 555 aa24.27■■□□□ 1.48
PSPC1-203ENST00000471658 GPTP24298 496 aa24.27■■□□□ 1.48
PSPC1-203ENST00000471658 TUBGCP6Q96RT7 1819 aa24.27■■□□□ 1.48
PSPC1-203ENST00000471658 PNPLA7Q6ZV29 1317 aa24.27■■□□□ 1.48
PSPC1-203ENST00000471658 USP42Q9H9J4 1324 aaKnown RBP24.27■■□□□ 1.48
PSPC1-203ENST00000471658 ZBTB7BO15156 539 aaPredicted RBP24.26■■□□□ 1.47
PSPC1-203ENST00000471658 ISCA1Q9BUE6 129 aa24.26■■□□□ 1.47
PSPC1-203ENST00000471658 C4AP0C0L4 1744 aa24.25■■□□□ 1.47
PSPC1-203ENST00000471658 MSH5O43196 834 aa24.25■■□□□ 1.47
PSPC1-203ENST00000471658 ALDH1L1O75891 902 aa24.24■■□□□ 1.47
PSPC1-203ENST00000471658 MEIS3Q99687 375 aa24.24■■□□□ 1.47
PSPC1-203ENST00000471658 DDX19BQ9UMR2 479 aa24.24■■□□□ 1.47
PSPC1-203ENST00000471658 NUP98P52948 1817 aa24.24■■□□□ 1.47
PSPC1-203ENST00000471658 JARID2Q92833 1246 aaPredicted RBP24.24■■□□□ 1.47
PSPC1-203ENST00000471658 BCORQ6W2J9 1755 aa24.23■■□□□ 1.47
PSPC1-203ENST00000471658 HSP90AB3PQ58FF7 597 aa24.23■■□□□ 1.47
PSPC1-203ENST00000471658 ZNF34Q8IZ26 560 aa24.23■■□□□ 1.47
PSPC1-203ENST00000471658 USP44Q9H0E7 712 aa24.23■■□□□ 1.47
PSPC1-203ENST00000471658 GYS1P13807 737 aa24.22■■□□□ 1.47
PSPC1-203ENST00000471658 GCKRQ14397 625 aa24.22■■□□□ 1.47
PSPC1-203ENST00000471658 TBC1D9BQ66K14 1250 aa24.22■■□□□ 1.47
PSPC1-203ENST00000471658 CLEC4GQ6UXB4 293 aa24.22■■□□□ 1.47
PSPC1-203ENST00000471658 BICDL1Q6ZP65 573 aa24.22■■□□□ 1.47
PSPC1-203ENST00000471658 UBN2Q6ZU65 1347 aa24.22■■□□□ 1.47
PSPC1-203ENST00000471658 TRIM28Q13263 835 aaKnown RBP24.21■■□□□ 1.47
PSPC1-203ENST00000471658 NLRP10Q86W26 655 aa24.21■■□□□ 1.47
PSPC1-203ENST00000471658 FLAD1Q8NFF5 587 aa24.21■■□□□ 1.47
PSPC1-203ENST00000471658 PDGFDQ9GZP0 370 aaPredicted RBP24.21■■□□□ 1.47
PSPC1-203ENST00000471658 ZNF652Q9Y2D9 606 aa24.21■■□□□ 1.47
PSPC1-203ENST00000471658 SCN7AQ01118 1682 aa24.21■■□□□ 1.47
PSPC1-203ENST00000471658 NIP7Q9Y221 180 aaKnown RBP eCLIP24.21■■□□□ 1.47
PSPC1-203ENST00000471658 GTF3C3Q9Y5Q9 886 aa24.21■■□□□ 1.47
PSPC1-203ENST00000471658 N4BP2Q86UW6 1770 aaPredicted RBP24.2■■□□□ 1.46
PSPC1-203ENST00000471658 NBPF7P0C2Y1 421 aaPredicted RBP24.2■■□□□ 1.46
PSPC1-203ENST00000471658 CCDC191Q8NCU4 936 aa24.2■■□□□ 1.46
PSPC1-203ENST00000471658 ZBTB40Q9NUA8 1239 aa24.2■■□□□ 1.46
PSPC1-203ENST00000471658 CWC25Q9NXE8 425 aaPredicted RBP24.2■■□□□ 1.46
PSPC1-203ENST00000471658 FAM177BA6PVY3 158 aa24.19■■□□□ 1.46
PSPC1-203ENST00000471658 C1orf115Q9H7X2 142 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms