RNA–Protein interactions for RNA: ENST00000471582.5

COL20A1-205, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 1,924 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-205ENST00000471582 SNRPA1P09661 255 aaKnown RBP22.72■■□□□ 1.23
COL20A1-205ENST00000471582 MCCP23508 829 aa22.72■■□□□ 1.23
COL20A1-205ENST00000471582 CWF19L2Q2TBE0 894 aaKnown RBP22.72■■□□□ 1.23
COL20A1-205ENST00000471582 NUTM1Q86Y26 1132 aa22.72■■□□□ 1.23
COL20A1-205ENST00000471582 TTC5Q8N0Z6 440 aa22.72■■□□□ 1.23
COL20A1-205ENST00000471582 TNPO1Q92973 898 aaKnown RBP22.72■■□□□ 1.23
COL20A1-205ENST00000471582 ZNF496Q96IT1 587 aaPredicted RBP22.72■■□□□ 1.23
COL20A1-205ENST00000471582 GBP4Q96PP9 640 aa22.72■■□□□ 1.23
COL20A1-205ENST00000471582 AK9Q5TCS8 1911 aa22.72■■□□□ 1.23
COL20A1-205ENST00000471582 IL27Q8NEV9 243 aa22.71■■□□□ 1.23
COL20A1-205ENST00000471582 LAMB4A4D0S4 1761 aa22.71■■□□□ 1.23
COL20A1-205ENST00000471582 FMNL2Q96PY5 1086 aa22.7■■□□□ 1.23
COL20A1-205ENST00000471582 UNC5CLQ8IV45 518 aa22.7■■□□□ 1.22
COL20A1-205ENST00000471582 GLI3P10071 1580 aa22.7■■□□□ 1.22
COL20A1-205ENST00000471582 PTMSP20962 102 aa22.69■■□□□ 1.22
COL20A1-205ENST00000471582 CABP4P57796 275 aa22.69■■□□□ 1.22
COL20A1-205ENST00000471582 NEXNQ0ZGT2 675 aa22.69■■□□□ 1.22
COL20A1-205ENST00000471582 RIC3Q7Z5B4 369 aa22.69■■□□□ 1.22
COL20A1-205ENST00000471582 OS9Q13438 667 aaPredicted RBP22.69■■□□□ 1.22
COL20A1-205ENST00000471582 IGKV5-2P06315 115 aa22.68■■□□□ 1.22
COL20A1-205ENST00000471582 AIMP1Q12904 312 aaKnown RBP22.68■■□□□ 1.22
COL20A1-205ENST00000471582 CLEC17AQ6ZS10 378 aa22.68■■□□□ 1.22
COL20A1-205ENST00000471582 CLASRPQ8N2M8 674 aaKnown RBP22.68■■□□□ 1.22
COL20A1-205ENST00000471582 PLCH1Q4KWH8 1693 aa22.67■■□□□ 1.22
COL20A1-205ENST00000471582 LRP10Q7Z4F1 713 aa22.67■■□□□ 1.22
COL20A1-205ENST00000471582 CNTROBQ8N137 903 aa22.67■■□□□ 1.22
COL20A1-205ENST00000471582 CWC22Q9HCG8 908 aaKnown RBP22.67■■□□□ 1.22
COL20A1-205ENST00000471582 ANO2Q9NQ90 1003 aa22.67■■□□□ 1.22
COL20A1-205ENST00000471582 GLRX3O76003 335 aaKnown RBP22.67■■□□□ 1.22
COL20A1-205ENST00000471582 MCM2P49736 904 aa22.67■■□□□ 1.22
COL20A1-205ENST00000471582 XAGE3Q8WTP9 111 aa22.67■■□□□ 1.22
COL20A1-205ENST00000471582 KAZALD1Q96I82 304 aa22.67■■□□□ 1.22
COL20A1-205ENST00000471582 SUCLG2Q96I99 432 aa22.67■■□□□ 1.22
COL20A1-205ENST00000471582 METTL22Q9BUU2 404 aaPredicted RBP22.67■■□□□ 1.22
COL20A1-205ENST00000471582 NEURL1BA8MQ27 555 aa22.66■■□□□ 1.22
COL20A1-205ENST00000471582 TRAK2O60296 914 aa22.65■■□□□ 1.22
COL20A1-205ENST00000471582 COPS6Q7L5N1 327 aa22.65■■□□□ 1.22
COL20A1-205ENST00000471582 GPATCH3Q96I76 525 aa22.65■■□□□ 1.22
COL20A1-205ENST00000471582 FOXD4L1Q9NU39 408 aa22.65■■□□□ 1.22
COL20A1-205ENST00000471582 SHANK3Q9BYB0 1731 aa22.65■■□□□ 1.22
COL20A1-205ENST00000471582 MYL6BP14649 208 aa22.65■■□□□ 1.22
COL20A1-205ENST00000471582 GCKRQ14397 625 aa22.65■■□□□ 1.22
COL20A1-205ENST00000471582 BICC1Q9H694 974 aaKnown RBP22.65■■□□□ 1.22
COL20A1-205ENST00000471582 ERBB4Q15303 1308 aa22.64■■□□□ 1.22
COL20A1-205ENST00000471582 COL15A1P39059 1388 aa22.64■■□□□ 1.22
COL20A1-205ENST00000471582 ERVV-2B6SEH9 535 aa22.64■■□□□ 1.21
COL20A1-205ENST00000471582 NUCB2P80303 420 aa22.64■■□□□ 1.21
COL20A1-205ENST00000471582 USP16Q9Y5T5 823 aa22.64■■□□□ 1.21
COL20A1-205ENST00000471582 ADAMTS2O95450 1211 aa22.63■■□□□ 1.21
COL20A1-205ENST00000471582 NKX1-1Q15270 411 aaPredicted RBP22.63■■□□□ 1.21
COL20A1-205ENST00000471582 ANKRD13DQ6ZTN6 518 aa22.63■■□□□ 1.21
COL20A1-205ENST00000471582 UBR2Q8IWV8 1755 aa22.63■■□□□ 1.21
COL20A1-205ENST00000471582 ECHDC1Q9NTX5 307 aa22.63■■□□□ 1.21
COL20A1-205ENST00000471582 JCADQ9P266 1359 aa22.63■■□□□ 1.21
COL20A1-205ENST00000471582 ARFGEF2Q9Y6D5 1785 aa22.62■■□□□ 1.21
COL20A1-205ENST00000471582 NRAPQ86VF7 1730 aa22.62■■□□□ 1.21
COL20A1-205ENST00000471582 SGSM2O43147 1006 aa22.62■■□□□ 1.21
COL20A1-205ENST00000471582 PAPPAQ13219 1627 aa22.62■■□□□ 1.21
COL20A1-205ENST00000471582 NEK4P51957 841 aa22.61■■□□□ 1.21
COL20A1-205ENST00000471582 NWD2Q9ULI1 1742 aa22.61■■□□□ 1.21
COL20A1-205ENST00000471582 RAD50Q92878 1312 aa22.61■■□□□ 1.21
COL20A1-205ENST00000471582 IFIT2P09913 472 aaKnown RBP22.61■■□□□ 1.21
COL20A1-205ENST00000471582 HSPA4P34932 840 aa22.61■■□□□ 1.21
COL20A1-205ENST00000471582 SKOR2Q2VWA4 1001 aaPredicted RBP22.61■■□□□ 1.21
COL20A1-205ENST00000471582 DDX54Q8TDD1 881 aaKnown RBP22.61■■□□□ 1.21
COL20A1-205ENST00000471582 PALD1Q9ULE6 856 aa22.61■■□□□ 1.21
COL20A1-205ENST00000471582 PA2G4Q9UQ80 394 aaKnown RBP22.61■■□□□ 1.21
COL20A1-205ENST00000471582 NUTM2BA6NNL0 878 aaPredicted RBP22.6■■□□□ 1.21
COL20A1-205ENST00000471582 NUTM2EB1AL46 878 aaPredicted RBP22.6■■□□□ 1.21
COL20A1-205ENST00000471582 CYP2E1P05181 493 aaPredicted RBP22.6■■□□□ 1.21
COL20A1-205ENST00000471582 G3BP1Q13283 466 aaKnown RBP eCLIP22.6■■□□□ 1.21
COL20A1-205ENST00000471582 L1TD1Q5T7N2 865 aaKnown RBP22.6■■□□□ 1.21
COL20A1-205ENST00000471582 NUTM2AQ8IVF1 878 aaPredicted RBP22.6■■□□□ 1.21
COL20A1-205ENST00000471582 MYD88Q99836 296 aa22.6■■□□□ 1.21
COL20A1-205ENST00000471582 DISP2A7MBM2 1401 aa22.6■■□□□ 1.21
COL20A1-205ENST00000471582 SSFA2P28290 1259 aa22.59■■□□□ 1.21
COL20A1-205ENST00000471582 AFDNP55196 1824 aaKnown RBP22.59■■□□□ 1.21
COL20A1-205ENST00000471582 IL25Q9H293 177 aa22.59■■□□□ 1.21
COL20A1-205ENST00000471582 MAP4K4O95819 1239 aaPredicted RBP22.58■■□□□ 1.21
COL20A1-205ENST00000471582 GOLGA6L22H0YM25 854 aa22.57■■□□□ 1.2
COL20A1-205ENST00000471582 SASH1O94885 1247 aa22.57■■□□□ 1.2
COL20A1-205ENST00000471582 PLBD2Q8NHP8 589 aa22.57■■□□□ 1.2
COL20A1-205ENST00000471582 WNK3Q9BYP7 1800 aa22.57■■□□□ 1.2
COL20A1-205ENST00000471582 SLIT2O94813 1529 aa22.57■■□□□ 1.2
COL20A1-205ENST00000471582 AACSQ86V21 672 aa22.57■■□□□ 1.2
COL20A1-205ENST00000471582 RUFY2Q8WXA3 655 aa22.57■■□□□ 1.2
COL20A1-205ENST00000471582 KCPQ6ZWJ8 1503 aa22.57■■□□□ 1.2
COL20A1-205ENST00000471582 CUL4AQ13619 759 aa22.55■■□□□ 1.2
COL20A1-205ENST00000471582 EVI5LQ96CN4 794 aa22.55■■□□□ 1.2
COL20A1-205ENST00000471582 TMX3Q96JJ7 454 aa22.55■■□□□ 1.2
COL20A1-205ENST00000471582 LSG1Q9H089 658 aaKnown RBP22.55■■□□□ 1.2
COL20A1-205ENST00000471582 FSD2A1L4K1 749 aa22.55■■□□□ 1.2
COL20A1-205ENST00000471582 HSPA1LP34931 641 aa22.55■■□□□ 1.2
COL20A1-205ENST00000471582 RABL6Q3YEC7 729 aaPredicted RBP22.55■■□□□ 1.2
COL20A1-205ENST00000471582 COPRSQ9NQ92 184 aa22.55■■□□□ 1.2
COL20A1-205ENST00000471582 TNS2Q63HR2 1409 aa22.54■■□□□ 1.2
COL20A1-205ENST00000471582 BAG4O95429 457 aaKnown RBP22.54■■□□□ 1.2
COL20A1-205ENST00000471582 KIAA1211Q6ZU35 1233 aa22.54■■□□□ 1.2
COL20A1-205ENST00000471582 INTS4Q96HW7 963 aaKnown RBP22.54■■□□□ 1.2
COL20A1-205ENST00000471582 DIAPH3Q9NSV4 1193 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms