RNA–Protein interactions for RNA: ENST00000471297.1

SMNDC1-204, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 823 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-204ENST00000471297 PRR36Q9H6K5 1346 aa8.09□□□□□ -1.11
SMNDC1-204ENST00000471297 SOCS7O14512 581 aa8.09□□□□□ -1.11
SMNDC1-204ENST00000471297 WDR43Q15061 677 aaKnown RBP eCLIP8.09□□□□□ -1.11
SMNDC1-204ENST00000471297 LIAT1Q6ZQX7 453 aa8.09□□□□□ -1.11
SMNDC1-204ENST00000471297 CFAP53Q96M91 514 aa8.09□□□□□ -1.11
SMNDC1-204ENST00000471297 UNC93B1Q9H1C4 597 aa8.09□□□□□ -1.11
SMNDC1-204ENST00000471297 APBB1O00213 710 aa8.08□□□□□ -1.12
SMNDC1-204ENST00000471297 PROSER2Q86WR7 435 aaPredicted RBP8.08□□□□□ -1.12
SMNDC1-204ENST00000471297 PRM3Q9NNZ6 103 aa8.08□□□□□ -1.12
SMNDC1-204ENST00000471297 CDC42BPGQ6DT37 1551 aa8.08□□□□□ -1.12
SMNDC1-204ENST00000471297 ACEP12821 1306 aa8.07□□□□□ -1.12
SMNDC1-204ENST00000471297 NCOA3Q9Y6Q9 1424 aa8.07□□□□□ -1.12
SMNDC1-204ENST00000471297 CD2BP2O95400 341 aaKnown RBP8.07□□□□□ -1.12
SMNDC1-204ENST00000471297 SLC19A1P41440 591 aa8.07□□□□□ -1.12
SMNDC1-204ENST00000471297 RPIAP49247 311 aa8.07□□□□□ -1.12
SMNDC1-204ENST00000471297 MTHFSP49914 203 aa8.07□□□□□ -1.12
SMNDC1-204ENST00000471297 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.07□□□□□ -1.12
SMNDC1-204ENST00000471297 ARMC2Q8NEN0 867 aa8.07□□□□□ -1.12
SMNDC1-204ENST00000471297 BAP1Q92560 729 aa8.07□□□□□ -1.12
SMNDC1-204ENST00000471297 EMID1Q96A84 441 aaPredicted RBP8.07□□□□□ -1.12
SMNDC1-204ENST00000471297 GGNBP2Q9H3C7 697 aa8.07□□□□□ -1.12
SMNDC1-204ENST00000471297 TTC21AQ8NDW8 1320 aa8.06□□□□□ -1.12
SMNDC1-204ENST00000471297 NWD1Q149M9 1564 aa8.06□□□□□ -1.12
SMNDC1-204ENST00000471297 ADGRL3Q9HAR2 1447 aa8.06□□□□□ -1.12
SMNDC1-204ENST00000471297 NGDNQ8NEJ9 315 aaKnown RBP8.06□□□□□ -1.12
SMNDC1-204ENST00000471297 COG3Q96JB2 828 aa8.06□□□□□ -1.12
SMNDC1-204ENST00000471297 FKBPLQ9UIM3 349 aa8.06□□□□□ -1.12
SMNDC1-204ENST00000471297 ADAMTS8Q9UP79 889 aa8.06□□□□□ -1.12
SMNDC1-204ENST00000471297 NKTRP30414 1462 aaKnown RBP8.06□□□□□ -1.12
SMNDC1-204ENST00000471297 TTC21BQ7Z4L5 1316 aa8.05□□□□□ -1.12
SMNDC1-204ENST00000471297 TNNT2P45379 298 aaPredicted RBP8.05□□□□□ -1.12
SMNDC1-204ENST00000471297 HSPA2P54652 639 aa8.05□□□□□ -1.12
SMNDC1-204ENST00000471297 PDE3BQ13370 1112 aa8.05□□□□□ -1.12
SMNDC1-204ENST00000471297 C14orf37Q86TY3 774 aa8.05□□□□□ -1.12
SMNDC1-204ENST00000471297 NGEFQ8N5V2 710 aa8.05□□□□□ -1.12
SMNDC1-204ENST00000471297 PNMA1Q8ND90 353 aa8.05□□□□□ -1.12
SMNDC1-204ENST00000471297 PRKD2Q9BZL6 878 aa8.05□□□□□ -1.12
SMNDC1-204ENST00000471297 C19orf44Q9H6X5 657 aa8.05□□□□□ -1.12
SMNDC1-204ENST00000471297 GDPD2Q9HCC8 539 aa8.05□□□□□ -1.12
SMNDC1-204ENST00000471297 NUDCQ9Y266 331 aa8.05□□□□□ -1.12
SMNDC1-204ENST00000471297 NDUFB9Q9Y6M9 179 aa8.05□□□□□ -1.12
SMNDC1-204ENST00000471297 LMTK3Q96Q04 1460 aa8.05□□□□□ -1.12
SMNDC1-204ENST00000471297 USP6P35125 1406 aa8.04□□□□□ -1.12
SMNDC1-204ENST00000471297 BLMP54132 1417 aaPredicted RBP8.04□□□□□ -1.12
SMNDC1-204ENST00000471297 RAD21O60216 631 aa8.04□□□□□ -1.12
SMNDC1-204ENST00000471297 TRIM32Q13049 653 aa8.04□□□□□ -1.12
SMNDC1-204ENST00000471297 PMFBP1Q8TBY8 1022 aa8.04□□□□□ -1.12
SMNDC1-204ENST00000471297 TBC1D2BQ9UPU7 963 aa8.04□□□□□ -1.12
SMNDC1-204ENST00000471297 COG6Q9Y2V7 657 aa8.04□□□□□ -1.12
SMNDC1-204ENST00000471297 AATKQ6ZMQ8 1374 aa8.04□□□□□ -1.12
SMNDC1-204ENST00000471297 TOPAZ1Q8N9V7 1692 aa8.04□□□□□ -1.12
SMNDC1-204ENST00000471297 SSH2Q76I76 1423 aa8.03□□□□□ -1.12
SMNDC1-204ENST00000471297 AKAP12Q02952 1782 aa8.03□□□□□ -1.12
SMNDC1-204ENST00000471297 LINC01559Q495D7 138 aa8.03□□□□□ -1.12
SMNDC1-204ENST00000471297 SPRYD7Q5W111 196 aa8.03□□□□□ -1.12
SMNDC1-204ENST00000471297 NME9Q86XW9 330 aa8.03□□□□□ -1.12
SMNDC1-204ENST00000471297 POM121Q96HA1 1249 aa8.03□□□□□ -1.12
SMNDC1-204ENST00000471297 PNNQ9H307 717 aaKnown RBP8.03□□□□□ -1.12
SMNDC1-204ENST00000471297 ITSN1Q15811 1721 aa8.03□□□□□ -1.12
SMNDC1-204ENST00000471297 FMN2Q9NZ56 1722 aa8.03□□□□□ -1.12
SMNDC1-204ENST00000471297 ANKRD26Q9UPS8 1709 aa8.03□□□□□ -1.12
SMNDC1-204ENST00000471297 USP31Q70CQ4 1352 aa8.02□□□□□ -1.13
SMNDC1-204ENST00000471297 PNPLA6Q8IY17 1366 aa8.02□□□□□ -1.13
SMNDC1-204ENST00000471297 DIAPH1O60610 1272 aaKnown RBP8.02□□□□□ -1.13
SMNDC1-204ENST00000471297 SH3BP2P78314 561 aa8.02□□□□□ -1.13
SMNDC1-204ENST00000471297 PDXDC2PQ6P474 469 aa8.02□□□□□ -1.13
SMNDC1-204ENST00000471297 GPKOWQ92917 476 aaPredicted RBP eCLIP8.02□□□□□ -1.13
SMNDC1-204ENST00000471297 CLUAP1Q96AJ1 413 aa8.02□□□□□ -1.13
SMNDC1-204ENST00000471297 POLKQ9UBT6 870 aa8.02□□□□□ -1.13
SMNDC1-204ENST00000471297 V9GY48 417 aaPredicted RBP8.02□□□□□ -1.13
SMNDC1-204ENST00000471297 MON2Q7Z3U7 1717 aa8.02□□□□□ -1.13
SMNDC1-204ENST00000471297 KIF20BQ96Q89 1820 aa8.01□□□□□ -1.13
SMNDC1-204ENST00000471297 ATF3P18847 181 aa8.01□□□□□ -1.13
SMNDC1-204ENST00000471297 ABL2P42684 1182 aa8.01□□□□□ -1.13
SMNDC1-204ENST00000471297 ESCO1Q5FWF5 840 aa8.01□□□□□ -1.13
SMNDC1-204ENST00000471297 NBPF14Q5TI25 921 aa8.01□□□□□ -1.13
SMNDC1-204ENST00000471297 ZNF598Q86UK7 904 aaKnown RBP8.01□□□□□ -1.13
SMNDC1-204ENST00000471297 ZNF511Q8NB15 262 aa8.01□□□□□ -1.13
SMNDC1-204ENST00000471297 RUNDC1Q96C34 613 aa8.01□□□□□ -1.13
SMNDC1-204ENST00000471297 DCCP43146 1447 aa8.01□□□□□ -1.13
SMNDC1-204ENST00000471297 ZC3H4Q9UPT8 1303 aaKnown RBP8.01□□□□□ -1.13
SMNDC1-204ENST00000471297 TMEM94Q12767 1356 aa8□□□□□ -1.13
SMNDC1-204ENST00000471297 RGS20O76081 388 aa8□□□□□ -1.13
SMNDC1-204ENST00000471297 WNT7BP56706 349 aa8□□□□□ -1.13
SMNDC1-204ENST00000471297 SKOR1P84550 965 aa8□□□□□ -1.13
SMNDC1-204ENST00000471297 PSME1Q06323 249 aa8□□□□□ -1.13
SMNDC1-204ENST00000471297 FOXJ1Q92949 421 aa8□□□□□ -1.13
SMNDC1-204ENST00000471297 ZMYND15Q9H091 742 aa8□□□□□ -1.13
SMNDC1-204ENST00000471297 SMG6Q86US8 1419 aaKnown RBP8□□□□□ -1.13
SMNDC1-204ENST00000471297 NALCNQ8IZF0 1738 aa8□□□□□ -1.13
SMNDC1-204ENST00000471297 U2AF1L5P0DN76 240 aaPredicted RBP7.99□□□□□ -1.13
SMNDC1-204ENST00000471297 U2AF1Q01081 240 aaKnown RBP eCLIP7.99□□□□□ -1.13
SMNDC1-204ENST00000471297 PTK2Q05397 1052 aa7.99□□□□□ -1.13
SMNDC1-204ENST00000471297 AGERQ15109 404 aa7.99□□□□□ -1.13
SMNDC1-204ENST00000471297 ERICH6Q7L0X2 663 aa7.99□□□□□ -1.13
SMNDC1-204ENST00000471297 MSH6P52701 1360 aa7.98□□□□□ -1.13
SMNDC1-204ENST00000471297 NRKQ7Z2Y5 1582 aa7.98□□□□□ -1.13
SMNDC1-204ENST00000471297 OVOS2A0A0J9YW53 1432 aa7.98□□□□□ -1.13
SMNDC1-204ENST00000471297 OVOS2Q6IE36 1432 aa7.98□□□□□ -1.13
SMNDC1-204ENST00000471297 APAF1O14727 1248 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms