RNA–Protein interactions for RNA: ENST00000471218.5

PTPRE-207, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3 BASIC

Gene PTPRE, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-207ENST00000471218 HEG1Q9ULI3 1381 aa11.63□□□□□ -0.55
PTPRE-207ENST00000471218 PTCD1O75127 700 aaKnown RBP11.62□□□□□ -0.55
PTPRE-207ENST00000471218 CRKLP46109 303 aaKnown RBP11.62□□□□□ -0.55
PTPRE-207ENST00000471218 CCDC30Q5VVM6 783 aa11.62□□□□□ -0.55
PTPRE-207ENST00000471218 DNAJC5GQ8N7S2 189 aa11.62□□□□□ -0.55
PTPRE-207ENST00000471218 C8orf58Q8NAV2 365 aa11.62□□□□□ -0.55
PTPRE-207ENST00000471218 NFATC2IPQ8NCF5 419 aa11.62□□□□□ -0.55
PTPRE-207ENST00000471218 DDX19BQ9UMR2 479 aa11.62□□□□□ -0.55
PTPRE-207ENST00000471218 PDZRN3Q9UPQ7 1066 aa11.62□□□□□ -0.55
PTPRE-207ENST00000471218 KIF13BQ9NQT8 1826 aa11.62□□□□□ -0.55
PTPRE-207ENST00000471218 USP42Q9H9J4 1324 aaKnown RBP11.61□□□□□ -0.55
PTPRE-207ENST00000471218 KDM6AO15550 1401 aaPredicted RBP11.61□□□□□ -0.55
PTPRE-207ENST00000471218 PLIN1O60240 522 aa11.61□□□□□ -0.55
PTPRE-207ENST00000471218 TRIM27P14373 513 aa11.61□□□□□ -0.55
PTPRE-207ENST00000471218 IRX6P78412 446 aaPredicted RBP11.61□□□□□ -0.55
PTPRE-207ENST00000471218 MVPQ14764 893 aaKnown RBP11.61□□□□□ -0.55
PTPRE-207ENST00000471218 TSPYL6Q8N831 410 aa11.61□□□□□ -0.55
PTPRE-207ENST00000471218 EXOC6Q8TAG9 804 aa11.61□□□□□ -0.55
PTPRE-207ENST00000471218 SLC4A9Q96Q91 983 aa11.61□□□□□ -0.55
PTPRE-207ENST00000471218 CRBNQ96SW2 442 aa11.61□□□□□ -0.55
PTPRE-207ENST00000471218 STK31Q9BXU1 1019 aa11.61□□□□□ -0.55
PTPRE-207ENST00000471218 SLC52A2Q9HAB3 445 aa11.61□□□□□ -0.55
PTPRE-207ENST00000471218 IBTKQ9P2D0 1353 aaPredicted RBP11.61□□□□□ -0.55
PTPRE-207ENST00000471218 KDM3BQ7LBC6 1761 aa11.61□□□□□ -0.55
PTPRE-207ENST00000471218 ABCC4O15439 1325 aa11.6□□□□□ -0.55
PTPRE-207ENST00000471218 SIPA1L3O60292 1781 aaPredicted RBP11.6□□□□□ -0.55
PTPRE-207ENST00000471218 BTBD11A6QL63 1104 aa11.6□□□□□ -0.55
PTPRE-207ENST00000471218 KCNA3P22001 575 aa11.6□□□□□ -0.55
PTPRE-207ENST00000471218 EIF4A1P60842 406 aaKnown RBP11.6□□□□□ -0.55
PTPRE-207ENST00000471218 SMC1BQ8NDV3 1235 aa11.6□□□□□ -0.55
PTPRE-207ENST00000471218 RNF181Q9P0P0 153 aa11.6□□□□□ -0.55
PTPRE-207ENST00000471218 TM4SF1P30408 202 aa11.59□□□□□ -0.55
PTPRE-207ENST00000471218 VSIG10Q8N0Z9 540 aa11.59□□□□□ -0.55
PTPRE-207ENST00000471218 FRAT1Q92837 279 aaPredicted RBP11.59□□□□□ -0.55
PTPRE-207ENST00000471218 CLUAP1Q96AJ1 413 aa11.59□□□□□ -0.55
PTPRE-207ENST00000471218 KLRG1Q96E93 195 aa11.59□□□□□ -0.55
PTPRE-207ENST00000471218 NMRK2Q9NPI5 230 aa11.59□□□□□ -0.55
PTPRE-207ENST00000471218 NOB1Q9ULX3 412 aaKnown RBP11.59□□□□□ -0.55
PTPRE-207ENST00000471218 SCN11AQ9UI33 1791 aa11.59□□□□□ -0.55
PTPRE-207ENST00000471218 C4AP0C0L4 1744 aa11.58□□□□□ -0.56
PTPRE-207ENST00000471218 VEGFAP15692 232 aaPredicted RBP11.58□□□□□ -0.56
PTPRE-207ENST00000471218 C20orf194Q5TEA3 1177 aa11.58□□□□□ -0.56
PTPRE-207ENST00000471218 CENPQQ7L2Z9 268 aaPredicted RBP11.58□□□□□ -0.56
PTPRE-207ENST00000471218 JMYQ8N9B5 988 aa11.58□□□□□ -0.56
PTPRE-207ENST00000471218 LGR6Q9HBX8 967 aa11.58□□□□□ -0.56
PTPRE-207ENST00000471218 ERBB4Q15303 1308 aa11.58□□□□□ -0.56
PTPRE-207ENST00000471218 A0A087WZG4 1122 aa11.57□□□□□ -0.56
PTPRE-207ENST00000471218 POLRMTO00411 1230 aaKnown RBP11.57□□□□□ -0.56
PTPRE-207ENST00000471218 STARD3NLO95772 234 aa11.57□□□□□ -0.56
PTPRE-207ENST00000471218 LMNB1P20700 586 aa11.57□□□□□ -0.56
PTPRE-207ENST00000471218 INTS3Q68E01 1043 aaKnown RBP11.57□□□□□ -0.56
PTPRE-207ENST00000471218 DPY19L2Q6NUT2 758 aa11.57□□□□□ -0.56
PTPRE-207ENST00000471218 ZNF790Q6PG37 636 aa11.57□□□□□ -0.56
PTPRE-207ENST00000471218 NPM2Q86SE8 214 aaKnown RBP11.57□□□□□ -0.56
PTPRE-207ENST00000471218 BCL2L13Q9BXK5 485 aa11.57□□□□□ -0.56
PTPRE-207ENST00000471218 TEX13AQ9BXU3 409 aaPredicted RBP11.57□□□□□ -0.56
PTPRE-207ENST00000471218 NARFQ9UHQ1 456 aa11.57□□□□□ -0.56
PTPRE-207ENST00000471218 CACNA1FO60840 1977 aa11.57□□□□□ -0.56
PTPRE-207ENST00000471218 H0YIN7 160 aa11.56□□□□□ -0.56
PTPRE-207ENST00000471218 INTS5Q6P9B9 1019 aaKnown RBP11.56□□□□□ -0.56
PTPRE-207ENST00000471218 TTLL6Q8N841 843 aa11.56□□□□□ -0.56
PTPRE-207ENST00000471218 PANK1Q8TE04 598 aa11.56□□□□□ -0.56
PTPRE-207ENST00000471218 RRAGCQ9HB90 399 aa11.56□□□□□ -0.56
PTPRE-207ENST00000471218 N4BP2Q86UW6 1770 aaPredicted RBP11.55□□□□□ -0.56
PTPRE-207ENST00000471218 GLTPD2A6NH11 291 aa11.55□□□□□ -0.56
PTPRE-207ENST00000471218 RLBP1P12271 317 aa11.55□□□□□ -0.56
PTPRE-207ENST00000471218 CCT4P50991 539 aaKnown RBP11.55□□□□□ -0.56
PTPRE-207ENST00000471218 HDGFL1Q5TGJ6 251 aa11.55□□□□□ -0.56
PTPRE-207ENST00000471218 USPL1Q5W0Q7 1092 aa11.55□□□□□ -0.56
PTPRE-207ENST00000471218 DBF4Q9UBU7 674 aaPredicted RBP11.55□□□□□ -0.56
PTPRE-207ENST00000471218 SRP68Q9UHB9 627 aaKnown RBP11.55□□□□□ -0.56
PTPRE-207ENST00000471218 ARFGEF1Q9Y6D6 1849 aa11.55□□□□□ -0.56
PTPRE-207ENST00000471218 COL5A3P25940 1745 aaPredicted RBP11.55□□□□□ -0.56
PTPRE-207ENST00000471218 SLC4A2P04920 1241 aa11.54□□□□□ -0.56
PTPRE-207ENST00000471218 CYP19A1P11511 503 aaPredicted RBP11.54□□□□□ -0.56
PTPRE-207ENST00000471218 PDE6BP35913 854 aa11.54□□□□□ -0.56
PTPRE-207ENST00000471218 DDR1Q08345 913 aa11.54□□□□□ -0.56
PTPRE-207ENST00000471218 B4GALNT3Q6L9W6 998 aa11.54□□□□□ -0.56
PTPRE-207ENST00000471218 TTC5Q8N0Z6 440 aa11.54□□□□□ -0.56
PTPRE-207ENST00000471218 FMNL2Q96PY5 1086 aa11.54□□□□□ -0.56
PTPRE-207ENST00000471218 ZBTB40Q9NUA8 1239 aa11.54□□□□□ -0.56
PTPRE-207ENST00000471218 COG6Q9Y2V7 657 aa11.54□□□□□ -0.56
PTPRE-207ENST00000471218 ELL2O00472 640 aaPredicted RBP11.53□□□□□ -0.56
PTPRE-207ENST00000471218 SERPINB2P05120 415 aa11.53□□□□□ -0.56
PTPRE-207ENST00000471218 SNRPA1P09661 255 aaKnown RBP11.53□□□□□ -0.56
PTPRE-207ENST00000471218 CHRNA5P30532 468 aa11.53□□□□□ -0.56
PTPRE-207ENST00000471218 HDAC1Q13547 482 aaPredicted RBP11.53□□□□□ -0.56
PTPRE-207ENST00000471218 SOGA3Q5TF21 947 aa11.53□□□□□ -0.56
PTPRE-207ENST00000471218 ITPRIPQ8IWB1 547 aa11.53□□□□□ -0.56
PTPRE-207ENST00000471218 DNAJC10Q8IXB1 793 aa11.53□□□□□ -0.56
PTPRE-207ENST00000471218 HYPKQ9NX55 129 aa11.53□□□□□ -0.56
PTPRE-207ENST00000471218 MIS18AQ9NYP9 233 aa11.53□□□□□ -0.56
PTPRE-207ENST00000471218 MYH14Q7Z406 1995 aaKnown RBP11.53□□□□□ -0.56
PTPRE-207ENST00000471218 FLIIQ13045 1269 aa11.52□□□□□ -0.57
PTPRE-207ENST00000471218 NFIXQ14938 502 aa11.52□□□□□ -0.57
PTPRE-207ENST00000471218 KRT24Q2M2I5 525 aa11.52□□□□□ -0.57
PTPRE-207ENST00000471218 TMEM57Q8N5G2 664 aa11.52□□□□□ -0.57
PTPRE-207ENST00000471218 RWDD1Q9H446 243 aaPredicted RBP11.52□□□□□ -0.57
PTPRE-207ENST00000471218 BRCA1P38398 1863 aaKnown RBP11.52□□□□□ -0.57
PTPRE-207ENST00000471218 KIAA1551Q9HCM1 1747 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms