RNA–Protein interactions for RNA: ENST00000471027.1

SCG5-204, Transcript of secretogranin V, humanhuman

TSL 2

Gene SCG5, Length 659 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG5-204ENST00000471027 NIP7Q9Y221 180 aaKnown RBP eCLIP11.74□□□□□ -0.53
SCG5-204ENST00000471027 UBR2Q8IWV8 1755 aa11.74□□□□□ -0.53
SCG5-204ENST00000471027 KCNQ3O43525 872 aa11.73□□□□□ -0.53
SCG5-204ENST00000471027 ERFEQ4G0M1 354 aa11.73□□□□□ -0.53
SCG5-204ENST00000471027 CC2D2BQ6DHV5 1058 aa11.73□□□□□ -0.53
SCG5-204ENST00000471027 PLEKHF1Q96S99 279 aa11.73□□□□□ -0.53
SCG5-204ENST00000471027 NMRK2Q9NPI5 230 aa11.73□□□□□ -0.53
SCG5-204ENST00000471027 KLRG2A4D1S0 409 aaPredicted RBP11.72□□□□□ -0.53
SCG5-204ENST00000471027 IQCA1LA6NCM1 817 aa11.72□□□□□ -0.53
SCG5-204ENST00000471027 C21orf2O43822 256 aa11.72□□□□□ -0.53
SCG5-204ENST00000471027 DCTN1Q14203 1278 aa11.72□□□□□ -0.53
SCG5-204ENST00000471027 WDR43Q15061 677 aaKnown RBP eCLIP11.72□□□□□ -0.53
SCG5-204ENST00000471027 CCDC93Q567U6 631 aa11.72□□□□□ -0.53
SCG5-204ENST00000471027 PRPF40BQ6NWY9 871 aaKnown RBP11.72□□□□□ -0.53
SCG5-204ENST00000471027 RRAGCQ9HB90 399 aa11.72□□□□□ -0.53
SCG5-204ENST00000471027 MYBBP1AQ9BQG0 1328 aaKnown RBP11.71□□□□□ -0.53
SCG5-204ENST00000471027 RIPK4P57078 832 aa11.71□□□□□ -0.53
SCG5-204ENST00000471027 EIF4A1P60842 406 aaKnown RBP11.71□□□□□ -0.53
SCG5-204ENST00000471027 PPP1R42Q7Z4L9 355 aa11.71□□□□□ -0.53
SCG5-204ENST00000471027 TSPYL4Q9UJ04 414 aa11.71□□□□□ -0.53
SCG5-204ENST00000471027 N4BP2Q86UW6 1770 aaPredicted RBP11.71□□□□□ -0.54
SCG5-204ENST00000471027 ARFGEF1Q9Y6D6 1849 aa11.7□□□□□ -0.54
SCG5-204ENST00000471027 MAP3K15Q6ZN16 1313 aa11.7□□□□□ -0.54
SCG5-204ENST00000471027 KIAA1551Q9HCM1 1747 aa11.7□□□□□ -0.54
SCG5-204ENST00000471027 NRXN2Q9P2S2 1712 aa11.7□□□□□ -0.54
SCG5-204ENST00000471027 NFKBIEO00221 500 aa11.7□□□□□ -0.54
SCG5-204ENST00000471027 PARP10Q53GL7 1025 aa11.7□□□□□ -0.54
SCG5-204ENST00000471027 HSP90AB3PQ58FF7 597 aa11.7□□□□□ -0.54
SCG5-204ENST00000471027 IBTKQ9P2D0 1353 aaPredicted RBP11.69□□□□□ -0.54
SCG5-204ENST00000471027 RNF123Q5XPI4 1314 aa11.69□□□□□ -0.54
SCG5-204ENST00000471027 NBPF26B4DH59 902 aa11.69□□□□□ -0.54
SCG5-204ENST00000471027 RASSF7Q02833 373 aa11.69□□□□□ -0.54
SCG5-204ENST00000471027 CALD1Q05682 793 aaKnown RBP11.69□□□□□ -0.54
SCG5-204ENST00000471027 NBPF10Q6P3W6 841 aaKnown RBP11.69□□□□□ -0.54
SCG5-204ENST00000471027 NBPF15Q8N660 670 aa11.69□□□□□ -0.54
SCG5-204ENST00000471027 RPGRQ92834 1020 aaKnown RBP11.69□□□□□ -0.54
SCG5-204ENST00000471027 RRP7AQ9Y3A4 280 aaKnown RBP11.69□□□□□ -0.54
SCG5-204ENST00000471027 FKBP4Q02790 459 aaKnown RBP eCLIP11.68□□□□□ -0.54
SCG5-204ENST00000471027 MIS18AQ9NYP9 233 aa11.68□□□□□ -0.54
SCG5-204ENST00000471027 PRAMEF22A3QJZ6 481 aa11.67□□□□□ -0.54
SCG5-204ENST00000471027 HOXB7P09629 217 aa11.67□□□□□ -0.54
SCG5-204ENST00000471027 TMPOP42166 694 aaKnown RBP11.67□□□□□ -0.54
SCG5-204ENST00000471027 GIGYF2Q6Y7W6 1299 aaKnown RBP11.67□□□□□ -0.54
SCG5-204ENST00000471027 NGEFQ8N5V2 710 aa11.67□□□□□ -0.54
SCG5-204ENST00000471027 JDP2Q8WYK2 163 aa11.67□□□□□ -0.54
SCG5-204ENST00000471027 RUNDC1Q96C34 613 aa11.67□□□□□ -0.54
SCG5-204ENST00000471027 RBM17Q96I25 401 aaKnown RBP11.67□□□□□ -0.54
SCG5-204ENST00000471027 NLRP3Q96P20 1036 aa11.67□□□□□ -0.54
SCG5-204ENST00000471027 SCN7AQ01118 1682 aa11.67□□□□□ -0.54
SCG5-204ENST00000471027 SIPA1L3O60292 1781 aaPredicted RBP11.67□□□□□ -0.54
SCG5-204ENST00000471027 BRCA1P38398 1863 aaKnown RBP11.66□□□□□ -0.54
SCG5-204ENST00000471027 HSP90B1P14625 803 aaKnown RBP11.66□□□□□ -0.54
SCG5-204ENST00000471027 MYL6BP14649 208 aa11.66□□□□□ -0.54
SCG5-204ENST00000471027 PIP4K2AP48426 406 aaPredicted RBP11.66□□□□□ -0.54
SCG5-204ENST00000471027 DDX10Q13206 875 aaKnown RBP11.66□□□□□ -0.54
SCG5-204ENST00000471027 VPS33BQ9H267 617 aa11.66□□□□□ -0.54
SCG5-204ENST00000471027 ZNF219Q9P2Y4 722 aaPredicted RBP11.66□□□□□ -0.54
SCG5-204ENST00000471027 HOXA10P31260 410 aaPredicted RBP11.65□□□□□ -0.54
SCG5-204ENST00000471027 CRY2Q49AN0 593 aa11.65□□□□□ -0.54
SCG5-204ENST00000471027 PNMA8AQ86V59 439 aaPredicted RBP11.65□□□□□ -0.54
SCG5-204ENST00000471027 CCDC24Q8N4L8 307 aa11.65□□□□□ -0.54
SCG5-204ENST00000471027 C7orf43Q8WVR3 580 aa11.65□□□□□ -0.54
SCG5-204ENST00000471027 KLRG1Q96E93 195 aa11.65□□□□□ -0.54
SCG5-204ENST00000471027 CRAMP1Q96RY5 1269 aa11.65□□□□□ -0.54
SCG5-204ENST00000471027 PSMD1Q99460 953 aa11.65□□□□□ -0.54
SCG5-204ENST00000471027 RIC1Q4ADV7 1423 aa11.65□□□□□ -0.54
SCG5-204ENST00000471027 FAM177BA6PVY3 158 aa11.64□□□□□ -0.55
SCG5-204ENST00000471027 HLFQ16534 295 aa11.64□□□□□ -0.55
SCG5-204ENST00000471027 DNAJC5GQ8N7S2 189 aa11.64□□□□□ -0.55
SCG5-204ENST00000471027 SUPT20HQ8NEM7 779 aa11.64□□□□□ -0.55
SCG5-204ENST00000471027 UTP14AQ9BVJ6 771 aaKnown RBP11.64□□□□□ -0.55
SCG5-204ENST00000471027 TNRC6CQ9HCJ0 1690 aaKnown RBP11.63□□□□□ -0.55
SCG5-204ENST00000471027 BBOX1O75936 387 aa11.63□□□□□ -0.55
SCG5-204ENST00000471027 EIF2S2P20042 333 aaKnown RBP11.63□□□□□ -0.55
SCG5-204ENST00000471027 EIF6P56537 245 aaKnown RBP11.63□□□□□ -0.55
SCG5-204ENST00000471027 IFFO2Q5TF58 517 aa11.63□□□□□ -0.55
SCG5-204ENST00000471027 CHADLQ6NUI6 762 aa11.63□□□□□ -0.55
SCG5-204ENST00000471027 TMC4Q7Z404 712 aa11.63□□□□□ -0.55
SCG5-204ENST00000471027 ZNF34Q8IZ26 560 aa11.63□□□□□ -0.55
SCG5-204ENST00000471027 L3MBTL3Q96JM7 780 aaPredicted RBP11.63□□□□□ -0.55
SCG5-204ENST00000471027 THUMPD2Q9BTF0 503 aaKnown RBP11.63□□□□□ -0.55
SCG5-204ENST00000471027 ZBTB3Q9H5J0 574 aa11.63□□□□□ -0.55
SCG5-204ENST00000471027 DDX21Q9NR30 783 aaKnown RBP eCLIP11.63□□□□□ -0.55
SCG5-204ENST00000471027 DBF4Q9UBU7 674 aaPredicted RBP11.63□□□□□ -0.55
SCG5-204ENST00000471027 DLEC1Q9Y238 1755 aa11.62□□□□□ -0.55
SCG5-204ENST00000471027 CHL1O00533 1208 aa11.62□□□□□ -0.55
SCG5-204ENST00000471027 IARSP41252 1262 aaKnown RBP11.62□□□□□ -0.55
SCG5-204ENST00000471027 SLC10A5Q5PT55 438 aa11.62□□□□□ -0.55
SCG5-204ENST00000471027 LDHDQ86WU2 507 aa11.62□□□□□ -0.55
SCG5-204ENST00000471027 GPC2Q8N158 579 aa11.62□□□□□ -0.55
SCG5-204ENST00000471027 JMYQ8N9B5 988 aa11.62□□□□□ -0.55
SCG5-204ENST00000471027 CFAP44Q96MT7 982 aa11.62□□□□□ -0.55
SCG5-204ENST00000471027 AFDNP55196 1824 aaKnown RBP11.62□□□□□ -0.55
SCG5-204ENST00000471027 VIRMAQ69YN4 1812 aaKnown RBP11.61□□□□□ -0.55
SCG5-204ENST00000471027 GPTP24298 496 aa11.61□□□□□ -0.55
SCG5-204ENST00000471027 LMOD1P29536 600 aaPredicted RBP11.61□□□□□ -0.55
SCG5-204ENST00000471027 ZEB1P37275 1124 aaPredicted RBP11.61□□□□□ -0.55
SCG5-204ENST00000471027 NEUROD2Q15784 382 aa11.61□□□□□ -0.55
SCG5-204ENST00000471027 TTLL7Q6ZT98 887 aa11.61□□□□□ -0.55
SCG5-204ENST00000471027 SYNE4Q8N205 404 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms