RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-222ENST00000470953 CACNA1SQ13698 1873 aa8.4□□□□□ -1.07
VARS-222ENST00000470953 EYSQ5T1H1 3165 aa8.4□□□□□ -1.07
VARS-222ENST00000470953 KDRP35968 1356 aa8.39□□□□□ -1.07
VARS-222ENST00000470953 EPS15P42566 896 aa8.39□□□□□ -1.07
VARS-222ENST00000470953 HUNKP57058 714 aa8.39□□□□□ -1.07
VARS-222ENST00000470953 DEFB123Q8N688 67 aa8.39□□□□□ -1.07
VARS-222ENST00000470953 CSRNP1Q96S65 589 aa8.39□□□□□ -1.07
VARS-222ENST00000470953 GLIS2Q9BZE0 524 aaPredicted RBP8.39□□□□□ -1.07
VARS-222ENST00000470953 PCDH11XQ9BZA7 1347 aa8.38□□□□□ -1.07
VARS-222ENST00000470953 PCDH11YQ9BZA8 1340 aa8.38□□□□□ -1.07
VARS-222ENST00000470953 CNTNAP4Q9C0A0 1308 aa8.38□□□□□ -1.07
VARS-222ENST00000470953 TATP17735 454 aaPredicted RBP8.38□□□□□ -1.07
VARS-222ENST00000470953 RC3H1Q5TC82 1133 aaKnown RBP8.38□□□□□ -1.07
VARS-222ENST00000470953 INTS3Q68E01 1043 aaKnown RBP8.38□□□□□ -1.07
VARS-222ENST00000470953 RAPGEF4Q8WZA2 1011 aa8.38□□□□□ -1.07
VARS-222ENST00000470953 ATG3Q9NT62 314 aa8.38□□□□□ -1.07
VARS-222ENST00000470953 ANKRD31Q8N7Z5 1873 aa8.38□□□□□ -1.07
VARS-222ENST00000470953 SLX4Q8IY92 1834 aa8.38□□□□□ -1.07
VARS-222ENST00000470953 BCORQ6W2J9 1755 aa8.38□□□□□ -1.07
VARS-222ENST00000470953 CGNL1Q0VF96 1302 aa8.37□□□□□ -1.07
VARS-222ENST00000470953 TBC1D8O95759 1140 aa8.37□□□□□ -1.07
VARS-222ENST00000470953 RGMBQ6NW40 437 aa8.37□□□□□ -1.07
VARS-222ENST00000470953 GPC2Q8N158 579 aa8.37□□□□□ -1.07
VARS-222ENST00000470953 ZNF277Q9NRM2 450 aaPredicted RBP8.37□□□□□ -1.07
VARS-222ENST00000470953 TMEM265A0A087WTH1 108 aa8.36□□□□□ -1.07
VARS-222ENST00000470953 FZD9O00144 591 aa8.36□□□□□ -1.07
VARS-222ENST00000470953 LMOD1P29536 600 aaPredicted RBP8.36□□□□□ -1.07
VARS-222ENST00000470953 AMPHP49418 695 aa8.36□□□□□ -1.07
VARS-222ENST00000470953 SCNN1DP51172 638 aa8.36□□□□□ -1.07
VARS-222ENST00000470953 ANKRD13DQ6ZTN6 518 aa8.36□□□□□ -1.07
VARS-222ENST00000470953 MTMR10Q9NXD2 777 aa8.36□□□□□ -1.07
VARS-222ENST00000470953 LAMA2P24043 3122 aaKnown RBP8.36□□□□□ -1.07
VARS-222ENST00000470953 SYNGAP1Q96PV0 1343 aa8.35□□□□□ -1.07
VARS-222ENST00000470953 SERPINB2P05120 415 aa8.35□□□□□ -1.07
VARS-222ENST00000470953 MAP3K12Q12852 859 aa8.35□□□□□ -1.07
VARS-222ENST00000470953 NFIXQ14938 502 aa8.35□□□□□ -1.07
VARS-222ENST00000470953 RRS1Q15050 365 aaKnown RBP8.35□□□□□ -1.07
VARS-222ENST00000470953 DLK2Q6UY11 383 aa8.35□□□□□ -1.07
VARS-222ENST00000470953 USP50Q70EL3 339 aaPredicted RBP8.35□□□□□ -1.07
VARS-222ENST00000470953 SLC12A5Q9H2X9 1139 aa8.35□□□□□ -1.07
VARS-222ENST00000470953 GJA3Q9Y6H8 435 aa8.35□□□□□ -1.07
VARS-222ENST00000470953 ZNF831Q5JPB2 1677 aa8.34□□□□□ -1.07
VARS-222ENST00000470953 ZNF157P51786 506 aaPredicted RBP8.34□□□□□ -1.07
VARS-222ENST00000470953 NKX1-1Q15270 411 aaPredicted RBP8.34□□□□□ -1.07
VARS-222ENST00000470953 USPL1Q5W0Q7 1092 aa8.34□□□□□ -1.07
VARS-222ENST00000470953 TMOD3Q9NYL9 352 aa8.34□□□□□ -1.07
VARS-222ENST00000470953 ARFGEF2Q9Y6D5 1785 aa8.33□□□□□ -1.08
VARS-222ENST00000470953 GPR25O00155 361 aa8.33□□□□□ -1.08
VARS-222ENST00000470953 SLC10A3P09131 477 aa8.33□□□□□ -1.08
VARS-222ENST00000470953 PRPF40BQ6NWY9 871 aaKnown RBP8.33□□□□□ -1.08
VARS-222ENST00000470953 TMC1Q8TDI8 760 aa8.33□□□□□ -1.08
VARS-222ENST00000470953 PRUNE2Q8WUY3 3088 aa8.33□□□□□ -1.08
VARS-222ENST00000470953 CCDC102AQ96A19 550 aa8.33□□□□□ -1.08
VARS-222ENST00000470953 RBM42Q9BTD8 480 aaKnown RBP8.33□□□□□ -1.08
VARS-222ENST00000470953 EDC4Q6P2E9 1401 aaKnown RBP8.32□□□□□ -1.08
VARS-222ENST00000470953 A0A1W2PPC1 479 aa8.32□□□□□ -1.08
VARS-222ENST00000470953 HSP90AB2PQ58FF8 381 aa8.32□□□□□ -1.08
VARS-222ENST00000470953 COL4A5P29400 1685 aa8.32□□□□□ -1.08
VARS-222ENST00000470953 A0A1W2PP64 1363 aa8.32□□□□□ -1.08
VARS-222ENST00000470953 FKBP4Q02790 459 aaKnown RBP eCLIP8.31□□□□□ -1.08
VARS-222ENST00000470953 SOGA3Q5TF21 947 aa8.31□□□□□ -1.08
VARS-222ENST00000470953 GPR153Q6NV75 609 aa8.31□□□□□ -1.08
VARS-222ENST00000470953 DPF3Q92784 378 aa8.31□□□□□ -1.08
VARS-222ENST00000470953 PIEZO1Q92508 2521 aa8.31□□□□□ -1.08
VARS-222ENST00000470953 TNFRSF10AO00220 468 aa8.3□□□□□ -1.08
VARS-222ENST00000470953 IARSP41252 1262 aaKnown RBP8.3□□□□□ -1.08
VARS-222ENST00000470953 CRKLP46109 303 aaKnown RBP8.3□□□□□ -1.08
VARS-222ENST00000470953 CCDC93Q567U6 631 aa8.3□□□□□ -1.08
VARS-222ENST00000470953 OLFM4Q6UX06 510 aa8.3□□□□□ -1.08
VARS-222ENST00000470953 HDGFL2Q7Z4V5 671 aaPredicted RBP8.3□□□□□ -1.08
VARS-222ENST00000470953 TRIM17Q9Y577 477 aa8.3□□□□□ -1.08
VARS-222ENST00000470953 ANKRD26Q9UPS8 1709 aa8.29□□□□□ -1.08
VARS-222ENST00000470953 FKTNO75072 461 aa8.29□□□□□ -1.08
VARS-222ENST00000470953 ZPR1O75312 459 aa8.29□□□□□ -1.08
VARS-222ENST00000470953 C7orf43Q8WVR3 580 aa8.29□□□□□ -1.08
VARS-222ENST00000470953 ARMC5Q96C12 935 aa8.29□□□□□ -1.08
VARS-222ENST00000470953 COG3Q96JB2 828 aa8.29□□□□□ -1.08
VARS-222ENST00000470953 TMEM106CQ9BVX2 250 aa8.29□□□□□ -1.08
VARS-222ENST00000470953 R3HDMLQ9H3Y0 253 aa8.29□□□□□ -1.08
VARS-222ENST00000470953 ADARB2Q9NS39 739 aaKnown RBP8.29□□□□□ -1.08
VARS-222ENST00000470953 RPTORQ8N122 1335 aa8.29□□□□□ -1.08
VARS-222ENST00000470953 RTL1A6NKG5 1358 aa8.28□□□□□ -1.08
VARS-222ENST00000470953 WTIPA6NIX2 430 aaPredicted RBP8.28□□□□□ -1.08
VARS-222ENST00000470953 PPEF1O14829 653 aaPredicted RBP8.28□□□□□ -1.08
VARS-222ENST00000470953 PHKG2P15735 406 aa8.28□□□□□ -1.08
VARS-222ENST00000470953 PDE6BP35913 854 aa8.28□□□□□ -1.08
VARS-222ENST00000470953 EIF6P56537 245 aaKnown RBP8.28□□□□□ -1.08
VARS-222ENST00000470953 NOM1Q5C9Z4 860 aaKnown RBP8.28□□□□□ -1.08
VARS-222ENST00000470953 CDC37L1Q7L3B6 337 aa8.28□□□□□ -1.08
VARS-222ENST00000470953 OTOP1Q7RTM1 612 aa8.28□□□□□ -1.08
VARS-222ENST00000470953 USP48Q86UV5 1035 aa8.28□□□□□ -1.08
VARS-222ENST00000470953 ALYREFQ86V81 257 aaKnown RBP8.28□□□□□ -1.08
VARS-222ENST00000470953 RASAL3Q86YV0 1011 aa8.28□□□□□ -1.08
VARS-222ENST00000470953 CNKSR1Q969H4 720 aa8.28□□□□□ -1.08
VARS-222ENST00000470953 BCL2L12Q9HB09 334 aa8.28□□□□□ -1.08
VARS-222ENST00000470953 GBA2Q9HCG7 927 aaPredicted RBP8.28□□□□□ -1.08
VARS-222ENST00000470953 PGAP2Q9UHJ9 254 aa8.28□□□□□ -1.08
VARS-222ENST00000470953 INTS5Q6P9B9 1019 aaKnown RBP8.27□□□□□ -1.09
VARS-222ENST00000470953 REM2Q8IYK8 340 aaPredicted RBP8.27□□□□□ -1.09
VARS-222ENST00000470953 BRIP1Q9BX63 1249 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms