RNA–Protein interactions for RNA: ENST00000470687.1

UBXN4-206, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-206ENST00000470687 TRIM28Q13263 835 aaKnown RBP5.56□□□□□ -1.52
UBXN4-206ENST00000470687 MTFR1Q15390 333 aa5.56□□□□□ -1.52
UBXN4-206ENST00000470687 GRIK4Q16099 956 aa5.56□□□□□ -1.52
UBXN4-206ENST00000470687 COG6Q9Y2V7 657 aa5.56□□□□□ -1.52
UBXN4-206ENST00000470687 STARD13Q9Y3M8 1113 aa5.56□□□□□ -1.52
UBXN4-206ENST00000470687 USP3Q9Y6I4 520 aa5.56□□□□□ -1.52
UBXN4-206ENST00000470687 APBB1O00213 710 aa5.55□□□□□ -1.52
UBXN4-206ENST00000470687 CDK2AP1O14519 115 aa5.55□□□□□ -1.52
UBXN4-206ENST00000470687 ALBP02768 609 aa5.55□□□□□ -1.52
UBXN4-206ENST00000470687 NID1P14543 1247 aa5.55□□□□□ -1.52
UBXN4-206ENST00000470687 C8orf86Q6ZUL3 223 aa5.55□□□□□ -1.52
UBXN4-206ENST00000470687 MICALL1Q8N3F8 863 aa5.55□□□□□ -1.52
UBXN4-206ENST00000470687 TNFRSF25Q93038 417 aa5.55□□□□□ -1.52
UBXN4-206ENST00000470687 SLC4A9Q96Q91 983 aa5.55□□□□□ -1.52
UBXN4-206ENST00000470687 SERTAD1Q9UHV2 236 aa5.55□□□□□ -1.52
UBXN4-206ENST00000470687 KRTAP4-8A0A0G2JLE6 195 aa5.54□□□□□ -1.52
UBXN4-206ENST00000470687 A6NJY4 79 aa5.54□□□□□ -1.52
UBXN4-206ENST00000470687 TMEM229AB2RXF0 380 aa5.54□□□□□ -1.52
UBXN4-206ENST00000470687 HYAL3O43820 417 aaPredicted RBP5.54□□□□□ -1.52
UBXN4-206ENST00000470687 EIF4G2P78344 907 aaKnown RBP eCLIP5.54□□□□□ -1.52
UBXN4-206ENST00000470687 ADGRE1Q14246 886 aa5.54□□□□□ -1.52
UBXN4-206ENST00000470687 BICDL1Q6ZP65 573 aa5.54□□□□□ -1.52
UBXN4-206ENST00000470687 ADAMTS19Q8TE59 1207 aa5.54□□□□□ -1.52
UBXN4-206ENST00000470687 GOLGA2P5Q9HBQ8 144 aa5.54□□□□□ -1.52
UBXN4-206ENST00000470687 CABP1Q9NZU7 370 aa5.54□□□□□ -1.52
UBXN4-206ENST00000470687 TBC1D2BQ9UPU7 963 aa5.54□□□□□ -1.52
UBXN4-206ENST00000470687 MBTPS1Q14703 1052 aa5.53□□□□□ -1.52
UBXN4-206ENST00000470687 PARP3Q9Y6F1 533 aa5.53□□□□□ -1.52
UBXN4-206ENST00000470687 C9orf172C9J069 976 aa5.52□□□□□ -1.53
UBXN4-206ENST00000470687 SELPP16109 830 aa5.52□□□□□ -1.53
UBXN4-206ENST00000470687 TXLNAP40222 546 aa5.52□□□□□ -1.53
UBXN4-206ENST00000470687 SLC30A3Q99726 388 aa5.52□□□□□ -1.53
UBXN4-206ENST00000470687 POM121CA8CG34 1229 aa5.51□□□□□ -1.53
UBXN4-206ENST00000470687 ADH7P40394 386 aa5.51□□□□□ -1.53
UBXN4-206ENST00000470687 LRRC69Q6ZNQ3 347 aa5.51□□□□□ -1.53
UBXN4-206ENST00000470687 C20orf204Q6ZNR8 217 aa5.51□□□□□ -1.53
UBXN4-206ENST00000470687 TXNRD3Q86VQ6 643 aa5.51□□□□□ -1.53
UBXN4-206ENST00000470687 ZDHHC1Q8WTX9 485 aa5.51□□□□□ -1.53
UBXN4-206ENST00000470687 ELNP15502 786 aa5.5□□□□□ -1.53
UBXN4-206ENST00000470687 SFSWAPQ12872 951 aaKnown RBP5.5□□□□□ -1.53
UBXN4-206ENST00000470687 MAP7D1Q3KQU3 841 aa5.5□□□□□ -1.53
UBXN4-206ENST00000470687 PLPP7Q8NBV4 271 aa5.5□□□□□ -1.53
UBXN4-206ENST00000470687 GDPD2Q9HCC8 539 aa5.5□□□□□ -1.53
UBXN4-206ENST00000470687 A0A0A0MRY4 1105 aa5.49□□□□□ -1.53
UBXN4-206ENST00000470687 EML1O00423 815 aa5.49□□□□□ -1.53
UBXN4-206ENST00000470687 SPEM2Q0P670 501 aa5.49□□□□□ -1.53
UBXN4-206ENST00000470687 TRAPPC3LQ5T215 181 aa5.49□□□□□ -1.53
UBXN4-206ENST00000470687 NRG1Q02297 640 aaPredicted RBP5.48□□□□□ -1.53
UBXN4-206ENST00000470687 SHISA2Q6UWI4 295 aa5.48□□□□□ -1.53
UBXN4-206ENST00000470687 RAB44Q7Z6P3 723 aaPredicted RBP5.48□□□□□ -1.53
UBXN4-206ENST00000470687 C7orf43Q8WVR3 580 aa5.48□□□□□ -1.53
UBXN4-206ENST00000470687 L3MBTL2Q969R5 705 aa5.48□□□□□ -1.53
UBXN4-206ENST00000470687 TP53INP1Q96A56 240 aa5.48□□□□□ -1.53
UBXN4-206ENST00000470687 LENG1Q96BZ8 264 aaPredicted RBP5.48□□□□□ -1.53
UBXN4-206ENST00000470687 SSBP4Q9BWG4 385 aaPredicted RBP5.48□□□□□ -1.53
UBXN4-206ENST00000470687 ZMYND15Q9H091 742 aa5.48□□□□□ -1.53
UBXN4-206ENST00000470687 SCHIP1Q9P0W5 487 aaPredicted RBP5.48□□□□□ -1.53
UBXN4-206ENST00000470687 GPC6Q9Y625 555 aaPredicted RBP5.48□□□□□ -1.53
UBXN4-206ENST00000470687 A6NJR5 290 aa5.47□□□□□ -1.53
UBXN4-206ENST00000470687 LILRB5O75023 590 aa5.47□□□□□ -1.53
UBXN4-206ENST00000470687 NEUROD1Q13562 356 aa5.47□□□□□ -1.53
UBXN4-206ENST00000470687 TEAD4Q15561 434 aa5.47□□□□□ -1.53
UBXN4-206ENST00000470687 MCTP1Q6DN14 999 aa5.47□□□□□ -1.53
UBXN4-206ENST00000470687 PCDHGA11Q9Y5H2 935 aa5.47□□□□□ -1.53
UBXN4-206ENST00000470687 BACH1O14867 736 aa5.46□□□□□ -1.54
UBXN4-206ENST00000470687 NOS2P35228 1153 aa5.46□□□□□ -1.54
UBXN4-206ENST00000470687 RAC1P63000 192 aa5.46□□□□□ -1.54
UBXN4-206ENST00000470687 VAC14Q08AM6 782 aa5.46□□□□□ -1.54
UBXN4-206ENST00000470687 NEUROD4Q9HD90 331 aa5.46□□□□□ -1.54
UBXN4-206ENST00000470687 ARID3CA6NKF2 412 aa5.45□□□□□ -1.54
UBXN4-206ENST00000470687 EPHA4P54764 986 aa5.45□□□□□ -1.54
UBXN4-206ENST00000470687 RNF112Q9ULX5 631 aa5.45□□□□□ -1.54
UBXN4-206ENST00000470687 KCNQ4P56696 695 aa5.44□□□□□ -1.54
UBXN4-206ENST00000470687 SLC9A9Q8IVB4 645 aa5.44□□□□□ -1.54
UBXN4-206ENST00000470687 RHPN1Q8TCX5 695 aa5.44□□□□□ -1.54
UBXN4-206ENST00000470687 BRD7Q9NPI1 651 aa5.44□□□□□ -1.54
UBXN4-206ENST00000470687 ZNF358Q9NW07 568 aa5.44□□□□□ -1.54
UBXN4-206ENST00000470687 ZNF232Q9UNY5 417 aa5.44□□□□□ -1.54
UBXN4-206ENST00000470687 SUPT5HO00267 1087 aaKnown RBP5.43□□□□□ -1.54
UBXN4-206ENST00000470687 FLIIQ13045 1269 aa5.43□□□□□ -1.54
UBXN4-206ENST00000470687 TBCELQ5QJ74 424 aa5.43□□□□□ -1.54
UBXN4-206ENST00000470687 SH3PXD2AQ5TCZ1 1133 aa5.43□□□□□ -1.54
UBXN4-206ENST00000470687 ILDR2Q71H61 639 aa5.43□□□□□ -1.54
UBXN4-206ENST00000470687 FMR1NBQ8N0W7 255 aaPredicted RBP5.43□□□□□ -1.54
UBXN4-206ENST00000470687 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.43□□□□□ -1.54
UBXN4-206ENST00000470687 HSH2DQ96JZ2 352 aa5.43□□□□□ -1.54
UBXN4-206ENST00000470687 UCN2Q96RP3 112 aa5.43□□□□□ -1.54
UBXN4-206ENST00000470687 JPH1Q9HDC5 661 aaPredicted RBP5.43□□□□□ -1.54
UBXN4-206ENST00000470687 PRM3Q9NNZ6 103 aa5.43□□□□□ -1.54
UBXN4-206ENST00000470687 USP21Q9UK80 565 aa5.43□□□□□ -1.54
UBXN4-206ENST00000470687 SLC6A14Q9UN76 642 aa5.43□□□□□ -1.54
UBXN4-206ENST00000470687 SERTM1A2A2V5 107 aa5.42□□□□□ -1.54
UBXN4-206ENST00000470687 GTF2IP78347 998 aa5.42□□□□□ -1.54
UBXN4-206ENST00000470687 TYRO3Q06418 890 aa5.42□□□□□ -1.54
UBXN4-206ENST00000470687 C14orf37Q86TY3 774 aa5.42□□□□□ -1.54
UBXN4-206ENST00000470687 NUDT8Q8WV74 236 aa5.42□□□□□ -1.54
UBXN4-206ENST00000470687 BHMTQ93088 406 aa5.42□□□□□ -1.54
UBXN4-206ENST00000470687 CEP63Q96MT8 703 aa5.42□□□□□ -1.54
UBXN4-206ENST00000470687 UBE2OQ9C0C9 1292 aaKnown RBP5.42□□□□□ -1.54
UBXN4-206ENST00000470687 ALG2Q9H553 416 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms