RNA–Protein interactions for RNA: ENST00000470399.1

TTC19-204, Transcript of tetratricopeptide repeat domain 19, humanhuman

TSL 5

Gene TTC19, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC19-204ENST00000470399 LTBP3Q9NS15 1303 aa32.85■■■□□ 2.85
TTC19-204ENST00000470399 SRGNP10124 158 aa32.85■■■□□ 2.85
TTC19-204ENST00000470399 COL13A1Q5TAT6 717 aaPredicted RBP32.85■■■□□ 2.85
TTC19-204ENST00000470399 MCM10Q7L590 875 aa32.85■■■□□ 2.85
TTC19-204ENST00000470399 ERFEQ4G0M1 354 aa32.83■■■□□ 2.85
TTC19-204ENST00000470399 STYK1Q6J9G0 422 aa32.83■■■□□ 2.85
TTC19-204ENST00000470399 PRPF40BQ6NWY9 871 aaKnown RBP32.82■■■□□ 2.84
TTC19-204ENST00000470399 NBPF26B4DH59 902 aa32.81■■■□□ 2.84
TTC19-204ENST00000470399 PPP2R1AP30153 589 aa32.81■■■□□ 2.84
TTC19-204ENST00000470399 DCTN1Q14203 1278 aa32.81■■■□□ 2.84
TTC19-204ENST00000470399 NBPF10Q6P3W6 841 aaKnown RBP32.81■■■□□ 2.84
TTC19-204ENST00000470399 NBPF15Q8N660 670 aa32.81■■■□□ 2.84
TTC19-204ENST00000470399 CFAP53Q96M91 514 aa32.81■■■□□ 2.84
TTC19-204ENST00000470399 KDM3BQ7LBC6 1761 aa32.81■■■□□ 2.84
TTC19-204ENST00000470399 CNKSR1Q969H4 720 aa32.8■■■□□ 2.84
TTC19-204ENST00000470399 TAOK3Q9H2K8 898 aa32.8■■■□□ 2.84
TTC19-204ENST00000470399 ST5P78524 1137 aa32.79■■■□□ 2.84
TTC19-204ENST00000470399 DPY19L2Q6NUT2 758 aa32.78■■■□□ 2.84
TTC19-204ENST00000470399 C7orf43Q8WVR3 580 aa32.78■■■□□ 2.84
TTC19-204ENST00000470399 MASTLQ96GX5 879 aa32.78■■■□□ 2.84
TTC19-204ENST00000470399 NUP98P52948 1817 aa32.78■■■□□ 2.84
TTC19-204ENST00000470399 SCN4AP35499 1836 aa32.77■■■□□ 2.84
TTC19-204ENST00000470399 SNRPA1P09661 255 aaKnown RBP32.77■■■□□ 2.84
TTC19-204ENST00000470399 POTEIP0CG38 1075 aa32.77■■■□□ 2.84
TTC19-204ENST00000470399 POTEJP0CG39 1038 aa32.77■■■□□ 2.84
TTC19-204ENST00000470399 U2AF1L5P0DN76 240 aaPredicted RBP32.77■■■□□ 2.84
TTC19-204ENST00000470399 U2AF1Q01081 240 aaKnown RBP eCLIP32.77■■■□□ 2.84
TTC19-204ENST00000470399 CLEC4GQ6UXB4 293 aa32.77■■■□□ 2.84
TTC19-204ENST00000470399 DDNO94850 711 aaPredicted RBP32.76■■■□□ 2.83
TTC19-204ENST00000470399 NPM2Q86SE8 214 aaKnown RBP32.76■■■□□ 2.83
TTC19-204ENST00000470399 NUDCQ9Y266 331 aa32.75■■■□□ 2.83
TTC19-204ENST00000470399 NPHP1O15259 732 aa32.74■■■□□ 2.83
TTC19-204ENST00000470399 NBPF5PQ86XG9 351 aaPredicted RBP32.74■■■□□ 2.83
TTC19-204ENST00000470399 KLRG2A4D1S0 409 aaPredicted RBP32.73■■■□□ 2.83
TTC19-204ENST00000470399 RTF1Q92541 710 aaKnown RBP32.72■■■□□ 2.83
TTC19-204ENST00000470399 OLFM4Q6UX06 510 aa32.71■■■□□ 2.83
TTC19-204ENST00000470399 HLFQ16534 295 aa32.7■■■□□ 2.83
TTC19-204ENST00000470399 SOGA3Q5TF21 947 aa32.69■■■□□ 2.82
TTC19-204ENST00000470399 MIS18AQ9NYP9 233 aa32.69■■■□□ 2.82
TTC19-204ENST00000470399 NIP7Q9Y221 180 aaKnown RBP eCLIP32.69■■■□□ 2.82
TTC19-204ENST00000470399 ADAMTSL1Q8N6G6 1762 aa32.68■■■□□ 2.82
TTC19-204ENST00000470399 HTATSF1O43719 755 aaKnown RBP32.68■■■□□ 2.82
TTC19-204ENST00000470399 HSPA1AP0DMV8 641 aaKnown RBP32.68■■■□□ 2.82
TTC19-204ENST00000470399 HSPA1BP0DMV9 641 aaKnown RBP32.68■■■□□ 2.82
TTC19-204ENST00000470399 NPR1P16066 1061 aa32.68■■■□□ 2.82
TTC19-204ENST00000470399 CHADLQ6NUI6 762 aa32.68■■■□□ 2.82
TTC19-204ENST00000470399 ZNF652Q9Y2D9 606 aa32.68■■■□□ 2.82
TTC19-204ENST00000470399 SNED1Q8TER0 1413 aa32.67■■■□□ 2.82
TTC19-204ENST00000470399 RGL2O15211 777 aa32.66■■■□□ 2.82
TTC19-204ENST00000470399 CCDC93Q567U6 631 aa32.66■■■□□ 2.82
TTC19-204ENST00000470399 FAM177BA6PVY3 158 aa32.65■■■□□ 2.82
TTC19-204ENST00000470399 TAF7Q15545 349 aaPredicted RBP32.65■■■□□ 2.82
TTC19-204ENST00000470399 L3MBTL3Q96JM7 780 aaPredicted RBP32.64■■■□□ 2.82
TTC19-204ENST00000470399 ZNF541Q9H0D2 1346 aa32.64■■■□□ 2.82
TTC19-204ENST00000470399 ABCC12Q96J65 1359 aa32.63■■■□□ 2.81
TTC19-204ENST00000470399 FKBP4Q02790 459 aaKnown RBP eCLIP32.63■■■□□ 2.81
TTC19-204ENST00000470399 TPTE2Q6XPS3 522 aa32.63■■■□□ 2.81
TTC19-204ENST00000470399 ZNF277Q9NRM2 450 aaPredicted RBP32.63■■■□□ 2.81
TTC19-204ENST00000470399 PASKQ96RG2 1323 aa32.61■■■□□ 2.81
TTC19-204ENST00000470399 CREBZFQ9NS37 354 aa32.61■■■□□ 2.81
TTC19-204ENST00000470399 COL4A5P29400 1685 aa32.61■■■□□ 2.81
TTC19-204ENST00000470399 TAF1DQ9H5J8 278 aaPredicted RBP32.6■■■□□ 2.81
TTC19-204ENST00000470399 TNS4Q8IZW8 715 aa32.59■■■□□ 2.81
TTC19-204ENST00000470399 MKRN1Q9UHC7 482 aaKnown RBP32.59■■■□□ 2.81
TTC19-204ENST00000470399 PLEKHF1Q96S99 279 aa32.58■■■□□ 2.81
TTC19-204ENST00000470399 TTLL7Q6ZT98 887 aa32.56■■■□□ 2.8
TTC19-204ENST00000470399 NUTM1Q86Y26 1132 aa32.56■■■□□ 2.8
TTC19-204ENST00000470399 LTBP1Q14766 1721 aa32.56■■■□□ 2.8
TTC19-204ENST00000470399 IQCA1LA6NCM1 817 aa32.55■■■□□ 2.8
TTC19-204ENST00000470399 CAPN15O75808 1086 aa32.55■■■□□ 2.8
TTC19-204ENST00000470399 CRY2Q49AN0 593 aa32.55■■■□□ 2.8
TTC19-204ENST00000470399 SLC51AQ86UW1 340 aa32.55■■■□□ 2.8
TTC19-204ENST00000470399 LDHDQ86WU2 507 aa32.55■■■□□ 2.8
TTC19-204ENST00000470399 NGEFQ8N5V2 710 aa32.55■■■□□ 2.8
TTC19-204ENST00000470399 THUMPD2Q9BTF0 503 aaKnown RBP32.55■■■□□ 2.8
TTC19-204ENST00000470399 EIF4A1P60842 406 aaKnown RBP32.54■■■□□ 2.8
TTC19-204ENST00000470399 UBN2Q6ZU65 1347 aa32.53■■■□□ 2.8
TTC19-204ENST00000470399 ITGBL1O95965 494 aaPredicted RBP32.53■■■□□ 2.8
TTC19-204ENST00000470399 SYNE4Q8N205 404 aa32.53■■■□□ 2.8
TTC19-204ENST00000470399 CNTNAP1P78357 1384 aa32.53■■■□□ 2.8
TTC19-204ENST00000470399 MAP3K15Q6ZN16 1313 aa32.52■■■□□ 2.8
TTC19-204ENST00000470399 ERVV-1B6SEH8 477 aa32.52■■■□□ 2.8
TTC19-204ENST00000470399 FZD9O00144 591 aa32.52■■■□□ 2.8
TTC19-204ENST00000470399 IARSP41252 1262 aaKnown RBP32.52■■■□□ 2.8
TTC19-204ENST00000470399 RTKN2Q8IZC4 609 aa32.52■■■□□ 2.8
TTC19-204ENST00000470399 ALDH1B1P30837 517 aa32.51■■■□□ 2.79
TTC19-204ENST00000470399 RIC1Q4ADV7 1423 aa32.51■■■□□ 2.79
TTC19-204ENST00000470399 RNF123Q5XPI4 1314 aa32.5■■■□□ 2.79
TTC19-204ENST00000470399 RRP7AQ9Y3A4 280 aaKnown RBP32.49■■■□□ 2.79
TTC19-204ENST00000470399 LAMB2P55268 1798 aa32.48■■■□□ 2.79
TTC19-204ENST00000470399 GTF2E1P29083 439 aaPredicted RBP32.48■■■□□ 2.79
TTC19-204ENST00000470399 NFE2L2Q16236 605 aa32.48■■■□□ 2.79
TTC19-204ENST00000470399 PNISRQ8TF01 805 aaKnown RBP32.48■■■□□ 2.79
TTC19-204ENST00000470399 HACL1Q9UJ83 578 aa32.48■■■□□ 2.79
TTC19-204ENST00000470399 IBTKQ9P2D0 1353 aaPredicted RBP32.47■■■□□ 2.79
TTC19-204ENST00000470399 MYL6BP14649 208 aa32.47■■■□□ 2.79
TTC19-204ENST00000470399 GPTP24298 496 aa32.47■■■□□ 2.79
TTC19-204ENST00000470399 EPHX2P34913 555 aa32.47■■■□□ 2.79
TTC19-204ENST00000470399 EAPPQ56P03 285 aaPredicted RBP32.47■■■□□ 2.79
TTC19-204ENST00000470399 PSMD1Q99460 953 aa32.47■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms