RNA–Protein interactions for RNA: ENST00000470232.1

SYNGAP1-205, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 3

Gene SYNGAP1, Length 394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-205ENST00000470232 FER1L6Q2WGJ9 1857 aa12.14□□□□□ -0.47
SYNGAP1-205ENST00000470232 ECE1P42892 770 aa12.13□□□□□ -0.47
SYNGAP1-205ENST00000470232 ST5P78524 1137 aa12.13□□□□□ -0.47
SYNGAP1-205ENST00000470232 CNTROBQ8N137 903 aa12.13□□□□□ -0.47
SYNGAP1-205ENST00000470232 MASTLQ96GX5 879 aa12.13□□□□□ -0.47
SYNGAP1-205ENST00000470232 ABT1Q9ULW3 272 aaKnown RBP12.13□□□□□ -0.47
SYNGAP1-205ENST00000470232 VIRMAQ69YN4 1812 aaKnown RBP12.13□□□□□ -0.47
SYNGAP1-205ENST00000470232 MYCNP04198 464 aaPredicted RBP12.12□□□□□ -0.47
SYNGAP1-205ENST00000470232 SLC39A6Q13433 755 aa12.12□□□□□ -0.47
SYNGAP1-205ENST00000470232 TBC1D9BQ66K14 1250 aa12.12□□□□□ -0.47
SYNGAP1-205ENST00000470232 PRR5LQ6MZQ0 368 aa12.12□□□□□ -0.47
SYNGAP1-205ENST00000470232 AEBP1Q8IUX7 1158 aa12.12□□□□□ -0.47
SYNGAP1-205ENST00000470232 SETDB2Q96T68 719 aa12.12□□□□□ -0.47
SYNGAP1-205ENST00000470232 TEX13AQ9BXU3 409 aaPredicted RBP12.12□□□□□ -0.47
SYNGAP1-205ENST00000470232 CARMIL3Q8ND23 1372 aa12.12□□□□□ -0.47
SYNGAP1-205ENST00000470232 RNMTO43148 476 aaKnown RBP12.11□□□□□ -0.47
SYNGAP1-205ENST00000470232 EPHX2P34913 555 aa12.11□□□□□ -0.47
SYNGAP1-205ENST00000470232 EIF5P55010 431 aaKnown RBP12.11□□□□□ -0.47
SYNGAP1-205ENST00000470232 CCDC93Q567U6 631 aa12.11□□□□□ -0.47
SYNGAP1-205ENST00000470232 PRPF40BQ6NWY9 871 aaKnown RBP12.11□□□□□ -0.47
SYNGAP1-205ENST00000470232 TTC5Q8N0Z6 440 aa12.11□□□□□ -0.47
SYNGAP1-205ENST00000470232 CNBD1Q8NA66 436 aa12.11□□□□□ -0.47
SYNGAP1-205ENST00000470232 LGR6Q9HBX8 967 aa12.11□□□□□ -0.47
SYNGAP1-205ENST00000470232 FOXD4L1Q9NU39 408 aa12.11□□□□□ -0.47
SYNGAP1-205ENST00000470232 SCN11AQ9UI33 1791 aa12.1□□□□□ -0.47
SYNGAP1-205ENST00000470232 SRGNP10124 158 aa12.1□□□□□ -0.47
SYNGAP1-205ENST00000470232 RTKN2Q8IZC4 609 aa12.1□□□□□ -0.47
SYNGAP1-205ENST00000470232 CFAP44Q96MT7 982 aa12.1□□□□□ -0.47
SYNGAP1-205ENST00000470232 POLR3GLQ9BT43 218 aa12.1□□□□□ -0.47
SYNGAP1-205ENST00000470232 FKBP4Q02790 459 aaKnown RBP eCLIP12.09□□□□□ -0.47
SYNGAP1-205ENST00000470232 PAXIP1Q6ZW49 1069 aaPredicted RBP12.09□□□□□ -0.47
SYNGAP1-205ENST00000470232 MORC1Q86VD1 984 aa12.09□□□□□ -0.47
SYNGAP1-205ENST00000470232 IL6STP40189 918 aaPredicted RBP12.08□□□□□ -0.48
SYNGAP1-205ENST00000470232 MAP1SQ66K74 1059 aaPredicted RBP12.08□□□□□ -0.48
SYNGAP1-205ENST00000470232 DIEXFQ68CQ4 756 aaKnown RBP12.08□□□□□ -0.48
SYNGAP1-205ENST00000470232 CCDC24Q8N4L8 307 aa12.08□□□□□ -0.48
SYNGAP1-205ENST00000470232 GPR101Q96P66 508 aaPredicted RBP12.08□□□□□ -0.48
SYNGAP1-205ENST00000470232 DDX21Q9NR30 783 aaKnown RBP eCLIP12.08□□□□□ -0.48
SYNGAP1-205ENST00000470232 TBC1D2BQ9UPU7 963 aa12.08□□□□□ -0.48
SYNGAP1-205ENST00000470232 ZNF330Q9Y3S2 320 aaPredicted RBP12.08□□□□□ -0.48
SYNGAP1-205ENST00000470232 CA12O43570 354 aa12.07□□□□□ -0.48
SYNGAP1-205ENST00000470232 NPR1P16066 1061 aa12.07□□□□□ -0.48
SYNGAP1-205ENST00000470232 LMOD1P29536 600 aaPredicted RBP12.07□□□□□ -0.48
SYNGAP1-205ENST00000470232 MAP2K2P36507 400 aa12.07□□□□□ -0.48
SYNGAP1-205ENST00000470232 GPC2Q8N158 579 aa12.07□□□□□ -0.48
SYNGAP1-205ENST00000470232 ANKRD31Q8N7Z5 1873 aa12.07□□□□□ -0.48
SYNGAP1-205ENST00000470232 JDP2Q8WYK2 163 aa12.07□□□□□ -0.48
SYNGAP1-205ENST00000470232 CAPNS2Q96L46 248 aa12.07□□□□□ -0.48
SYNGAP1-205ENST00000470232 SLX4Q8IY92 1834 aa12.07□□□□□ -0.48
SYNGAP1-205ENST00000470232 ALDH1B1P30837 517 aa12.06□□□□□ -0.48
SYNGAP1-205ENST00000470232 IL13P35225 146 aa12.06□□□□□ -0.48
SYNGAP1-205ENST00000470232 C7orf43Q8WVR3 580 aa12.06□□□□□ -0.48
SYNGAP1-205ENST00000470232 ZNF277Q9NRM2 450 aaPredicted RBP12.06□□□□□ -0.48
SYNGAP1-205ENST00000470232 FZD9O00144 591 aa12.05□□□□□ -0.48
SYNGAP1-205ENST00000470232 EIF6P56537 245 aaKnown RBP12.05□□□□□ -0.48
SYNGAP1-205ENST00000470232 GRM1Q13255 1194 aa12.05□□□□□ -0.48
SYNGAP1-205ENST00000470232 NBPF5PQ86XG9 351 aaPredicted RBP12.05□□□□□ -0.48
SYNGAP1-205ENST00000470232 RNF123Q5XPI4 1314 aa12.05□□□□□ -0.48
SYNGAP1-205ENST00000470232 ZNF541Q9H0D2 1346 aa12.05□□□□□ -0.48
SYNGAP1-205ENST00000470232 ZNF316A6NFI3 1004 aaPredicted RBP12.04□□□□□ -0.48
SYNGAP1-205ENST00000470232 IARSP41252 1262 aaKnown RBP12.04□□□□□ -0.48
SYNGAP1-205ENST00000470232 TEFQ10587 303 aa12.04□□□□□ -0.48
SYNGAP1-205ENST00000470232 CYP4F22Q6NT55 531 aa12.04□□□□□ -0.48
SYNGAP1-205ENST00000470232 CLEC4GQ6UXB4 293 aa12.04□□□□□ -0.48
SYNGAP1-205ENST00000470232 TPTE2Q6XPS3 522 aa12.04□□□□□ -0.48
SYNGAP1-205ENST00000470232 SYNE4Q8N205 404 aa12.04□□□□□ -0.48
SYNGAP1-205ENST00000470232 PANK3Q9H999 370 aa12.04□□□□□ -0.48
SYNGAP1-205ENST00000470232 ZNF652Q9Y2D9 606 aa12.04□□□□□ -0.48
SYNGAP1-205ENST00000470232 MRC1P22897 1456 aa12.03□□□□□ -0.48
SYNGAP1-205ENST00000470232 CAMTA2O94983 1202 aa12.03□□□□□ -0.48
SYNGAP1-205ENST00000470232 DZIP3Q86Y13 1208 aaKnown RBP12.03□□□□□ -0.48
SYNGAP1-205ENST00000470232 MCOLN1Q9GZU1 580 aa12.03□□□□□ -0.48
SYNGAP1-205ENST00000470232 GJA3Q9Y6H8 435 aa12.03□□□□□ -0.48
SYNGAP1-205ENST00000470232 CACNA1SQ13698 1873 aa12.03□□□□□ -0.48
SYNGAP1-205ENST00000470232 COL11A2P13942 1736 aaPredicted RBP12.03□□□□□ -0.48
SYNGAP1-205ENST00000470232 ARFGEF2Q9Y6D5 1785 aa12.02□□□□□ -0.48
SYNGAP1-205ENST00000470232 DSG3P32926 999 aa12.02□□□□□ -0.49
SYNGAP1-205ENST00000470232 MTHFSDQ2M296 383 aaKnown RBP12.02□□□□□ -0.49
SYNGAP1-205ENST00000470232 GRIPAP1Q4V328 841 aa12.02□□□□□ -0.49
SYNGAP1-205ENST00000470232 ZNF790Q6PG37 636 aa12.02□□□□□ -0.49
SYNGAP1-205ENST00000470232 USP50Q70EL3 339 aaPredicted RBP12.02□□□□□ -0.49
SYNGAP1-205ENST00000470232 ZNF496Q96IT1 587 aaPredicted RBP12.02□□□□□ -0.49
SYNGAP1-205ENST00000470232 FMNL2Q96PY5 1086 aa12.02□□□□□ -0.49
SYNGAP1-205ENST00000470232 TLL2Q9Y6L7 1015 aa12.02□□□□□ -0.49
SYNGAP1-205ENST00000470232 HEG1Q9ULI3 1381 aa12.02□□□□□ -0.49
SYNGAP1-205ENST00000470232 ADAMTSL1Q8N6G6 1762 aa12.01□□□□□ -0.49
SYNGAP1-205ENST00000470232 KLRG2A4D1S0 409 aaPredicted RBP12.01□□□□□ -0.49
SYNGAP1-205ENST00000470232 HMOX1P09601 288 aa12.01□□□□□ -0.49
SYNGAP1-205ENST00000470232 DGKZQ13574 1117 aa12.01□□□□□ -0.49
SYNGAP1-205ENST00000470232 CC2D2BQ6DHV5 1058 aa12.01□□□□□ -0.49
SYNGAP1-205ENST00000470232 PSMD1Q99460 953 aa12.01□□□□□ -0.49
SYNGAP1-205ENST00000470232 KNSTRNQ9Y448 316 aa12.01□□□□□ -0.49
SYNGAP1-205ENST00000470232 A1BGP04217 495 aa12□□□□□ -0.49
SYNGAP1-205ENST00000470232 GTF2E1P29083 439 aaPredicted RBP12□□□□□ -0.49
SYNGAP1-205ENST00000470232 TSKSQ9UJT2 592 aa12□□□□□ -0.49
SYNGAP1-205ENST00000470232 SCN7AQ01118 1682 aa12□□□□□ -0.49
SYNGAP1-205ENST00000470232 AOC2O75106 756 aa11.99□□□□□ -0.49
SYNGAP1-205ENST00000470232 BRPF1P55201 1214 aaPredicted RBP11.99□□□□□ -0.49
SYNGAP1-205ENST00000470232 CST9Q5W186 159 aa11.99□□□□□ -0.49
SYNGAP1-205ENST00000470232 HHIPL1Q96JK4 782 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms