RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 LRRC69Q6ZNQ3 347 aa7.63□□□□□ -1.19
BRCA2-202ENST00000470094 CNTNAP3BQ96NU0 1288 aa7.63□□□□□ -1.19
BRCA2-202ENST00000470094 CFHR5Q9BXR6 569 aa7.63□□□□□ -1.19
BRCA2-202ENST00000470094 CNTNAP3Q9BZ76 1288 aa7.63□□□□□ -1.19
BRCA2-202ENST00000470094 ZCCHC2Q9C0B9 1178 aaKnown RBP7.63□□□□□ -1.19
BRCA2-202ENST00000470094 ANKIB1Q9P2G1 1089 aa7.63□□□□□ -1.19
BRCA2-202ENST00000470094 ATXN7L1Q9ULK2 861 aaPredicted RBP7.63□□□□□ -1.19
BRCA2-202ENST00000470094 GAS6Q14393 721 aa7.62□□□□□ -1.19
BRCA2-202ENST00000470094 RNFT1Q5M7Z0 435 aa7.62□□□□□ -1.19
BRCA2-202ENST00000470094 C7orf43Q8WVR3 580 aa7.62□□□□□ -1.19
BRCA2-202ENST00000470094 ABHD17AQ96GS6 310 aa7.62□□□□□ -1.19
BRCA2-202ENST00000470094 MKNK1Q9BUB5 465 aa7.62□□□□□ -1.19
BRCA2-202ENST00000470094 BNIP3LO60238 219 aa7.61□□□□□ -1.19
BRCA2-202ENST00000470094 MX2P20592 715 aa7.61□□□□□ -1.19
BRCA2-202ENST00000470094 KRT76Q01546 638 aa7.61□□□□□ -1.19
BRCA2-202ENST00000470094 SAMD5Q5TGI4 173 aa7.61□□□□□ -1.19
BRCA2-202ENST00000470094 HSH2DQ96JZ2 352 aa7.61□□□□□ -1.19
BRCA2-202ENST00000470094 SLAIN2Q9P270 581 aa7.61□□□□□ -1.19
BRCA2-202ENST00000470094 DCDC2BA2VCK2 349 aa7.6□□□□□ -1.19
BRCA2-202ENST00000470094 KHNYNO15037 678 aaKnown RBP7.6□□□□□ -1.19
BRCA2-202ENST00000470094 PTCD1O75127 700 aaKnown RBP7.6□□□□□ -1.19
BRCA2-202ENST00000470094 FAM157BP0CG42 384 aa7.6□□□□□ -1.19
BRCA2-202ENST00000470094 PDE4CQ08493 712 aa7.6□□□□□ -1.19
BRCA2-202ENST00000470094 RETREG2Q8NC44 543 aa7.6□□□□□ -1.19
BRCA2-202ENST00000470094 COL26A1Q96A83 441 aa7.6□□□□□ -1.19
BRCA2-202ENST00000470094 KLRG1Q96E93 195 aa7.6□□□□□ -1.19
BRCA2-202ENST00000470094 SUSD3Q96L08 255 aa7.6□□□□□ -1.19
BRCA2-202ENST00000470094 QTRT2Q9H974 415 aaKnown RBP7.6□□□□□ -1.19
BRCA2-202ENST00000470094 MBIPQ9NS73 344 aa7.6□□□□□ -1.19
BRCA2-202ENST00000470094 NDFIP2Q9NV92 336 aa7.6□□□□□ -1.19
BRCA2-202ENST00000470094 NSFL1CQ9UNZ2 370 aaKnown RBP7.6□□□□□ -1.19
BRCA2-202ENST00000470094 FGFR3P22607 806 aa7.59□□□□□ -1.19
BRCA2-202ENST00000470094 INSM1Q01101 510 aaPredicted RBP7.59□□□□□ -1.19
BRCA2-202ENST00000470094 DGKZQ13574 1117 aa7.59□□□□□ -1.19
BRCA2-202ENST00000470094 MYO19Q96H55 970 aa7.59□□□□□ -1.19
BRCA2-202ENST00000470094 STK17AQ9UEE5 414 aa7.59□□□□□ -1.19
BRCA2-202ENST00000470094 CARNS1A5YM72 827 aa7.58□□□□□ -1.2
BRCA2-202ENST00000470094 MAPTP10636 758 aaKnown RBP7.58□□□□□ -1.2
BRCA2-202ENST00000470094 TNP2Q05952 138 aa7.58□□□□□ -1.2
BRCA2-202ENST00000470094 ZNF280CQ8ND82 737 aa7.58□□□□□ -1.2
BRCA2-202ENST00000470094 CEP63Q96MT8 703 aa7.58□□□□□ -1.2
BRCA2-202ENST00000470094 KLK14Q9P0G3 267 aa7.58□□□□□ -1.2
BRCA2-202ENST00000470094 TGFBR3LH3BV60 316 aa7.57□□□□□ -1.2
BRCA2-202ENST00000470094 SSFA2P28290 1259 aa7.57□□□□□ -1.2
BRCA2-202ENST00000470094 SRSF11Q05519 484 aaKnown RBP7.57□□□□□ -1.2
BRCA2-202ENST00000470094 B4GALNT3Q6L9W6 998 aa7.57□□□□□ -1.2
BRCA2-202ENST00000470094 C16orf46Q6P387 395 aa7.57□□□□□ -1.2
BRCA2-202ENST00000470094 IGF1RP08069 1367 aa7.57□□□□□ -1.2
BRCA2-202ENST00000470094 EFSO43281 561 aa7.56□□□□□ -1.2
BRCA2-202ENST00000470094 ADAMTS2O95450 1211 aa7.56□□□□□ -1.2
BRCA2-202ENST00000470094 BMP4P12644 408 aa7.56□□□□□ -1.2
BRCA2-202ENST00000470094 MAP2K3P46734 347 aa7.56□□□□□ -1.2
BRCA2-202ENST00000470094 LAMC2Q13753 1193 aa7.56□□□□□ -1.2
BRCA2-202ENST00000470094 NAA30Q147X3 362 aaPredicted RBP7.56□□□□□ -1.2
BRCA2-202ENST00000470094 C11orf91Q3C1V1 193 aa7.56□□□□□ -1.2
BRCA2-202ENST00000470094 COX20Q5RI15 118 aa7.56□□□□□ -1.2
BRCA2-202ENST00000470094 IER5Q5VY09 327 aa7.56□□□□□ -1.2
BRCA2-202ENST00000470094 CAPN12Q6ZSI9 719 aa7.56□□□□□ -1.2
BRCA2-202ENST00000470094 BTLAQ7Z6A9 289 aa7.56□□□□□ -1.2
BRCA2-202ENST00000470094 LRFN2Q9ULH4 789 aa7.56□□□□□ -1.2
BRCA2-202ENST00000470094 CD33P20138 364 aa7.55□□□□□ -1.2
BRCA2-202ENST00000470094 TYRO3Q06418 890 aa7.55□□□□□ -1.2
BRCA2-202ENST00000470094 BRD7Q9NPI1 651 aa7.55□□□□□ -1.2
BRCA2-202ENST00000470094 MARK1Q9P0L2 795 aa7.55□□□□□ -1.2
BRCA2-202ENST00000470094 SLURP2P0DP57 97 aa7.54□□□□□ -1.2
BRCA2-202ENST00000470094 CTBSQ01459 385 aa7.54□□□□□ -1.2
BRCA2-202ENST00000470094 FAM182BQ5T319 152 aa7.54□□□□□ -1.2
BRCA2-202ENST00000470094 ZSCAN1Q8NBB4 408 aa7.54□□□□□ -1.2
BRCA2-202ENST00000470094 IFT43Q96FT9 208 aa7.54□□□□□ -1.2
BRCA2-202ENST00000470094 SAP130Q9H0E3 1048 aa7.54□□□□□ -1.2
BRCA2-202ENST00000470094 SEPT3Q9UH03 358 aa7.54□□□□□ -1.2
BRCA2-202ENST00000470094 MTMR7Q9Y216 660 aa7.54□□□□□ -1.2
BRCA2-202ENST00000470094 BCS1LQ9Y276 419 aa7.54□□□□□ -1.2
BRCA2-202ENST00000470094 STRN4Q9NRL3 753 aa7.53□□□□□ -1.2
BRCA2-202ENST00000470094 KCNH4Q9UQ05 1017 aa7.53□□□□□ -1.2
BRCA2-202ENST00000470094 EPB42P16452 691 aa7.52□□□□□ -1.21
BRCA2-202ENST00000470094 BRD2P25440 801 aaKnown RBP7.52□□□□□ -1.21
BRCA2-202ENST00000470094 SCNN1AP37088 669 aa7.52□□□□□ -1.21
BRCA2-202ENST00000470094 IDH3AP50213 366 aa7.52□□□□□ -1.21
BRCA2-202ENST00000470094 SFSWAPQ12872 951 aaKnown RBP7.52□□□□□ -1.21
BRCA2-202ENST00000470094 PHLDB3Q6NSJ2 640 aa7.52□□□□□ -1.21
BRCA2-202ENST00000470094 HCN2Q9UL51 889 aa7.52□□□□□ -1.21
BRCA2-202ENST00000470094 PRR12Q9ULL5 1215 aa7.52□□□□□ -1.21
BRCA2-202ENST00000470094 C2CD2LO14523 706 aa7.51□□□□□ -1.21
BRCA2-202ENST00000470094 MICAL2O94851 1124 aa7.51□□□□□ -1.21
BRCA2-202ENST00000470094 ARSDP51689 593 aa7.51□□□□□ -1.21
BRCA2-202ENST00000470094 KCNQ4P56696 695 aa7.51□□□□□ -1.21
BRCA2-202ENST00000470094 SVOPQ8N4V2 548 aa7.51□□□□□ -1.21
BRCA2-202ENST00000470094 OXCT2Q9BYC2 517 aaPredicted RBP7.51□□□□□ -1.21
BRCA2-202ENST00000470094 DMGDHQ9UI17 866 aaKnown RBP7.51□□□□□ -1.21
BRCA2-202ENST00000470094 TNFRSF10BO14763 440 aa7.5□□□□□ -1.21
BRCA2-202ENST00000470094 MAP3K10Q02779 954 aa7.5□□□□□ -1.21
BRCA2-202ENST00000470094 SPEM2Q0P670 501 aa7.5□□□□□ -1.21
BRCA2-202ENST00000470094 TREML1Q86YW5 311 aa7.5□□□□□ -1.21
BRCA2-202ENST00000470094 STIM2Q9P246 746 aa7.5□□□□□ -1.21
BRCA2-202ENST00000470094 GDF2Q9UK05 429 aaPredicted RBP7.5□□□□□ -1.21
BRCA2-202ENST00000470094 ARAFP10398 606 aa7.49□□□□□ -1.21
BRCA2-202ENST00000470094 LORP23490 312 aaPredicted RBP7.49□□□□□ -1.21
BRCA2-202ENST00000470094 INPP5BP32019 993 aa7.49□□□□□ -1.21
BRCA2-202ENST00000470094 NEUROD1Q13562 356 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms