RNA–Protein interactions for RNA: ENST00000469762.5

SMC4-210, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 3,998 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-210ENST00000469762 CEMIPQ8WUJ3 1361 aa12.37□□□□□ -0.43
SMC4-210ENST00000469762 FAM177BA6PVY3 158 aa12.37□□□□□ -0.43
SMC4-210ENST00000469762 AMPHP49418 695 aa12.37□□□□□ -0.43
SMC4-210ENST00000469762 CYB5RLQ6IPT4 315 aa12.37□□□□□ -0.43
SMC4-210ENST00000469762 CHD2O14647 1828 aaKnown RBP12.37□□□□□ -0.43
SMC4-210ENST00000469762 SLC26A8Q96RN1 970 aa12.37□□□□□ -0.43
SMC4-210ENST00000469762 CASTP20810 708 aaKnown RBP12.36□□□□□ -0.43
SMC4-210ENST00000469762 HDGFL1Q5TGJ6 251 aa12.36□□□□□ -0.43
SMC4-210ENST00000469762 KIF1BPQ96EK5 621 aa12.36□□□□□ -0.43
SMC4-210ENST00000469762 PYCARDQ9ULZ3 195 aa12.36□□□□□ -0.43
SMC4-210ENST00000469762 ADCY9O60503 1353 aa12.36□□□□□ -0.43
SMC4-210ENST00000469762 KCNQ3O43525 872 aa12.36□□□□□ -0.43
SMC4-210ENST00000469762 GJB2P29033 226 aa12.36□□□□□ -0.43
SMC4-210ENST00000469762 CCDC83Q8IWF9 413 aa12.36□□□□□ -0.43
SMC4-210ENST00000469762 ME3Q16798 604 aa12.36□□□□□ -0.43
SMC4-210ENST00000469762 KIAA1524Q8TCG1 905 aa12.35□□□□□ -0.43
SMC4-210ENST00000469762 ZSWIM6Q9HCJ5 1215 aa12.35□□□□□ -0.43
SMC4-210ENST00000469762 HMGN5P82970 282 aaKnown RBP12.35□□□□□ -0.43
SMC4-210ENST00000469762 NECTIN1Q15223 517 aa12.35□□□□□ -0.43
SMC4-210ENST00000469762 USHBP1Q8N6Y0 703 aa12.35□□□□□ -0.43
SMC4-210ENST00000469762 DDX54Q8TDD1 881 aaKnown RBP12.35□□□□□ -0.43
SMC4-210ENST00000469762 BABAM1Q9NWV8 329 aa12.35□□□□□ -0.43
SMC4-210ENST00000469762 ANXA1P04083 346 aa12.35□□□□□ -0.43
SMC4-210ENST00000469762 EIF4A1P60842 406 aaKnown RBP12.35□□□□□ -0.43
SMC4-210ENST00000469762 LGR6Q9HBX8 967 aa12.35□□□□□ -0.43
SMC4-210ENST00000469762 CHPF2Q9P2E5 772 aa12.35□□□□□ -0.43
SMC4-210ENST00000469762 CNTROBQ8N137 903 aa12.34□□□□□ -0.43
SMC4-210ENST00000469762 PRIMPOLQ96LW4 560 aa12.34□□□□□ -0.43
SMC4-210ENST00000469762 TAF6LQ9Y6J9 622 aa12.34□□□□□ -0.43
SMC4-210ENST00000469762 PI4KAP2A4QPH2 592 aa12.34□□□□□ -0.43
SMC4-210ENST00000469762 NUTM2GQ5VZR2 741 aa12.34□□□□□ -0.43
SMC4-210ENST00000469762 PI4KAP1Q8N8J0 262 aa12.34□□□□□ -0.43
SMC4-210ENST00000469762 SMC3Q9UQE7 1217 aa12.34□□□□□ -0.43
SMC4-210ENST00000469762 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.34□□□□□ -0.43
SMC4-210ENST00000469762 RGPD2P0DJD1 1756 aa12.34□□□□□ -0.43
SMC4-210ENST00000469762 HDGFP51858 240 aaKnown RBP12.34□□□□□ -0.43
SMC4-210ENST00000469762 VPS53Q5VIR6 699 aa12.34□□□□□ -0.43
SMC4-210ENST00000469762 TPCN1Q9ULQ1 816 aa12.34□□□□□ -0.43
SMC4-210ENST00000469762 LTN1O94822 1766 aa12.33□□□□□ -0.44
SMC4-210ENST00000469762 LETM1O95202 739 aaPredicted RBP12.33□□□□□ -0.44
SMC4-210ENST00000469762 TTC6Q86TZ1 520 aa12.33□□□□□ -0.44
SMC4-210ENST00000469762 NECAB1Q8N987 351 aa12.33□□□□□ -0.44
SMC4-210ENST00000469762 PRPF40BQ6NWY9 871 aaKnown RBP12.33□□□□□ -0.44
SMC4-210ENST00000469762 FAM173BQ6P4H8 233 aa12.33□□□□□ -0.44
SMC4-210ENST00000469762 MTERF4Q7Z6M4 381 aaKnown RBP12.33□□□□□ -0.44
SMC4-210ENST00000469762 CCDC94Q9BW85 323 aaPredicted RBP12.33□□□□□ -0.44
SMC4-210ENST00000469762 MTX1Q13505 466 aa12.33□□□□□ -0.44
SMC4-210ENST00000469762 JAKMIP1Q96N16 626 aaKnown RBP12.33□□□□□ -0.44
SMC4-210ENST00000469762 AMOTL2Q9Y2J4 779 aa12.33□□□□□ -0.44
SMC4-210ENST00000469762 TTC41PQ6P2S7 1318 aa12.32□□□□□ -0.44
SMC4-210ENST00000469762 EIF2S2P20042 333 aaKnown RBP12.32□□□□□ -0.44
SMC4-210ENST00000469762 NLRP6P59044 892 aa12.32□□□□□ -0.44
SMC4-210ENST00000469762 TM6SF1Q9BZW5 370 aa12.32□□□□□ -0.44
SMC4-210ENST00000469762 NPHP4O75161 1426 aaPredicted RBP12.32□□□□□ -0.44
SMC4-210ENST00000469762 LIG1P18858 919 aa12.32□□□□□ -0.44
SMC4-210ENST00000469762 SMAP1Q8IYB5 467 aaPredicted RBP12.32□□□□□ -0.44
SMC4-210ENST00000469762 DNAAF4Q8WXU2 420 aa12.32□□□□□ -0.44
SMC4-210ENST00000469762 PDRG1Q9NUG6 133 aa12.32□□□□□ -0.44
SMC4-210ENST00000469762 PA2G4Q9UQ80 394 aaKnown RBP12.32□□□□□ -0.44
SMC4-210ENST00000469762 CDC37L1Q7L3B6 337 aa12.31□□□□□ -0.44
SMC4-210ENST00000469762 KAZALD1Q96I82 304 aa12.31□□□□□ -0.44
SMC4-210ENST00000469762 ZSCAN20P17040 1043 aaPredicted RBP12.31□□□□□ -0.44
SMC4-210ENST00000469762 ATP2B3Q16720 1220 aa12.31□□□□□ -0.44
SMC4-210ENST00000469762 NGDNQ8NEJ9 315 aaKnown RBP12.31□□□□□ -0.44
SMC4-210ENST00000469762 LTV1Q96GA3 475 aaPredicted RBP12.31□□□□□ -0.44
SMC4-210ENST00000469762 FAM227BQ96M60 508 aa12.31□□□□□ -0.44
SMC4-210ENST00000469762 BCL2L12Q9HB09 334 aa12.31□□□□□ -0.44
SMC4-210ENST00000469762 PRDM10Q9NQV6 1147 aa12.31□□□□□ -0.44
SMC4-210ENST00000469762 MRVI1Q9Y6F6 885 aa12.31□□□□□ -0.44
SMC4-210ENST00000469762 GLRX3O76003 335 aaKnown RBP12.31□□□□□ -0.44
SMC4-210ENST00000469762 DNTTIP2Q5QJE6 756 aaKnown RBP12.31□□□□□ -0.44
SMC4-210ENST00000469762 LMO7Q8WWI1 1683 aa12.3□□□□□ -0.44
SMC4-210ENST00000469762 SETD1BQ9UPS6 1966 aaKnown RBP12.3□□□□□ -0.44
SMC4-210ENST00000469762 PROSER3Q2NL68 480 aa12.3□□□□□ -0.44
SMC4-210ENST00000469762 KLHL34Q8N239 644 aa12.3□□□□□ -0.44
SMC4-210ENST00000469762 MAP4K1Q92918 833 aa12.3□□□□□ -0.44
SMC4-210ENST00000469762 SNRKQ9NRH2 765 aa12.3□□□□□ -0.44
SMC4-210ENST00000469762 CCDC171Q6TFL3 1326 aa12.3□□□□□ -0.44
SMC4-210ENST00000469762 SASH1O94885 1247 aa12.29□□□□□ -0.44
SMC4-210ENST00000469762 CREB3L3Q68CJ9 461 aa12.29□□□□□ -0.44
SMC4-210ENST00000469762 SPC24Q8NBT2 197 aa12.29□□□□□ -0.44
SMC4-210ENST00000469762 RBM8AQ9Y5S9 174 aaKnown RBP12.29□□□□□ -0.44
SMC4-210ENST00000469762 NBPF6Q5VWK0 638 aa12.29□□□□□ -0.44
SMC4-210ENST00000469762 NBPF4Q96M43 638 aa12.29□□□□□ -0.44
SMC4-210ENST00000469762 ECHDC1Q9NTX5 307 aa12.29□□□□□ -0.44
SMC4-210ENST00000469762 RIOK3O14730 519 aaKnown RBP12.28□□□□□ -0.44
SMC4-210ENST00000469762 LUZP1Q86V48 1076 aa12.28□□□□□ -0.44
SMC4-210ENST00000469762 TCEANC2Q96MN5 208 aa12.28□□□□□ -0.44
SMC4-210ENST00000469762 SH2B1Q9NRF2 756 aaPredicted RBP12.28□□□□□ -0.44
SMC4-210ENST00000469762 TLR7Q9NYK1 1049 aaKnown RBP12.28□□□□□ -0.44
SMC4-210ENST00000469762 ATP6V1DQ9Y5K8 247 aa12.28□□□□□ -0.44
SMC4-210ENST00000469762 VPS37CA5D8V6 355 aaPredicted RBP12.28□□□□□ -0.44
SMC4-210ENST00000469762 TOB2Q14106 344 aaPredicted RBP12.28□□□□□ -0.44
SMC4-210ENST00000469762 FERMT3Q86UX7 667 aa12.28□□□□□ -0.44
SMC4-210ENST00000469762 DIAPH3Q9NSV4 1193 aa12.28□□□□□ -0.44
SMC4-210ENST00000469762 CYP46A1Q9Y6A2 500 aa12.28□□□□□ -0.44
SMC4-210ENST00000469762 PRAMEF22A3QJZ6 481 aa12.28□□□□□ -0.44
SMC4-210ENST00000469762 CAMK4Q16566 473 aa12.28□□□□□ -0.44
SMC4-210ENST00000469762 ZSCAN31Q96LW9 406 aaPredicted RBP12.28□□□□□ -0.44
SMC4-210ENST00000469762 COL15A1P39059 1388 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms