RNA–Protein interactions for RNA: ENST00000469750.5

BRAT1-204, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,226 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-204ENST00000469750 NEFHP12036 1026 aa18.32■□□□□ 0.52
BRAT1-204ENST00000469750 CCT2P78371 535 aaKnown RBP18.32■□□□□ 0.52
BRAT1-204ENST00000469750 TTC22Q5TAA0 569 aa18.32■□□□□ 0.52
BRAT1-204ENST00000469750 NLRP5P59047 1200 aa18.32■□□□□ 0.52
BRAT1-204ENST00000469750 TMEM266Q2M3C6 531 aa18.32■□□□□ 0.52
BRAT1-204ENST00000469750 NUP160Q12769 1436 aa18.32■□□□□ 0.52
BRAT1-204ENST00000469750 ASXL2Q76L83 1435 aa18.32■□□□□ 0.52
BRAT1-204ENST00000469750 CUL5Q93034 780 aa18.32■□□□□ 0.52
BRAT1-204ENST00000469750 PPIP5K1Q6PFW1 1433 aa18.32■□□□□ 0.52
BRAT1-204ENST00000469750 CTAGE5O15320 804 aa18.31■□□□□ 0.52
BRAT1-204ENST00000469750 DESP17661 470 aa18.31■□□□□ 0.52
BRAT1-204ENST00000469750 SFPQP23246 707 aaKnown RBP eCLIP18.31■□□□□ 0.52
BRAT1-204ENST00000469750 ESPNB1AK53 854 aa18.31■□□□□ 0.52
BRAT1-204ENST00000469750 SSFA2P28290 1259 aa18.31■□□□□ 0.52
BRAT1-204ENST00000469750 KLHL10Q6JEL2 608 aa18.31■□□□□ 0.52
BRAT1-204ENST00000469750 TAF4BQ92750 862 aa18.31■□□□□ 0.52
BRAT1-204ENST00000469750 TSG101Q99816 390 aa18.31■□□□□ 0.52
BRAT1-204ENST00000469750 HMG20BQ9P0W2 317 aa18.31■□□□□ 0.52
BRAT1-204ENST00000469750 ASXL1Q8IXJ9 1541 aa18.31■□□□□ 0.52
BRAT1-204ENST00000469750 NPHP3Q7Z494 1330 aa18.31■□□□□ 0.52
BRAT1-204ENST00000469750 TEX14Q8IWB6 1497 aa18.31■□□□□ 0.52
BRAT1-204ENST00000469750 RHPN1Q8TCX5 695 aa18.31■□□□□ 0.52
BRAT1-204ENST00000469750 BAG3O95817 575 aa18.3■□□□□ 0.52
BRAT1-204ENST00000469750 UQCRFS1P1P0C7P4 283 aa18.3■□□□□ 0.52
BRAT1-204ENST00000469750 ZCRB1Q8TBF4 217 aaKnown RBP18.3■□□□□ 0.52
BRAT1-204ENST00000469750 LEKR1Q6ZMV7 388 aa18.3■□□□□ 0.52
BRAT1-204ENST00000469750 FKBP15Q5T1M5 1219 aa18.3■□□□□ 0.52
BRAT1-204ENST00000469750 CHPF2Q9P2E5 772 aa18.3■□□□□ 0.52
BRAT1-204ENST00000469750 UGGT2Q9NYU1 1516 aa18.3■□□□□ 0.52
BRAT1-204ENST00000469750 TMEM67Q5HYA8 995 aa18.3■□□□□ 0.52
BRAT1-204ENST00000469750 SPTY2D1Q68D10 685 aaPredicted RBP18.3■□□□□ 0.52
BRAT1-204ENST00000469750 USP16Q9Y5T5 823 aa18.3■□□□□ 0.52
BRAT1-204ENST00000469750 IARSP41252 1262 aaKnown RBP18.29■□□□□ 0.52
BRAT1-204ENST00000469750 EIF3JO75822 258 aaKnown RBP18.29■□□□□ 0.52
BRAT1-204ENST00000469750 NEK1Q96PY6 1258 aa18.29■□□□□ 0.52
BRAT1-204ENST00000469750 RIMS2Q9UQ26 1411 aa18.29■□□□□ 0.52
BRAT1-204ENST00000469750 KIF5BP33176 963 aa18.29■□□□□ 0.52
BRAT1-204ENST00000469750 PDE4BQ07343 736 aa18.29■□□□□ 0.52
BRAT1-204ENST00000469750 HDAC1Q13547 482 aaPredicted RBP18.29■□□□□ 0.52
BRAT1-204ENST00000469750 CCDC191Q8NCU4 936 aa18.29■□□□□ 0.52
BRAT1-204ENST00000469750 ZNF219Q9P2Y4 722 aaPredicted RBP18.29■□□□□ 0.52
BRAT1-204ENST00000469750 IGHDP01880 384 aa18.28■□□□□ 0.52
BRAT1-204ENST00000469750 GJB2P29033 226 aa18.28■□□□□ 0.52
BRAT1-204ENST00000469750 RFC4P35249 363 aa18.28■□□□□ 0.52
BRAT1-204ENST00000469750 CCDC12Q8WUD4 166 aaPredicted RBP18.28■□□□□ 0.52
BRAT1-204ENST00000469750 ZNF518AQ6AHZ1 1483 aa18.28■□□□□ 0.52
BRAT1-204ENST00000469750 POTEJP0CG39 1038 aa18.28■□□□□ 0.52
BRAT1-204ENST00000469750 CCDC152Q4G0S7 254 aa18.28■□□□□ 0.52
BRAT1-204ENST00000469750 TSHZ3Q63HK5 1081 aa18.28■□□□□ 0.52
BRAT1-204ENST00000469750 NCOA7Q8NI08 942 aa18.28■□□□□ 0.52
BRAT1-204ENST00000469750 MFSD6Q6ZSS7 791 aa18.28■□□□□ 0.52
BRAT1-204ENST00000469750 CNNM3Q8NE01 707 aa18.28■□□□□ 0.52
BRAT1-204ENST00000469750 XAGE3Q8WTP9 111 aa18.28■□□□□ 0.52
BRAT1-204ENST00000469750 JARID2Q92833 1246 aaPredicted RBP18.28■□□□□ 0.52
BRAT1-204ENST00000469750 TNPO1Q92973 898 aaKnown RBP18.28■□□□□ 0.52
BRAT1-204ENST00000469750 LARP6Q9BRS8 491 aaKnown RBP18.28■□□□□ 0.52
BRAT1-204ENST00000469750 TSPYL1Q9H0U9 437 aa18.28■□□□□ 0.52
BRAT1-204ENST00000469750 SEPT7Q16181 437 aaKnown RBP18.28■□□□□ 0.52
BRAT1-204ENST00000469750 MEIS3Q99687 375 aa18.28■□□□□ 0.52
BRAT1-204ENST00000469750 DDX19AQ9NUU7 478 aaKnown RBP18.28■□□□□ 0.52
BRAT1-204ENST00000469750 AKAP4Q5JQC9 854 aa18.27■□□□□ 0.52
BRAT1-204ENST00000469750 SYCP2Q9BX26 1530 aa18.27■□□□□ 0.52
BRAT1-204ENST00000469750 HAND2P61296 217 aa18.27■□□□□ 0.52
BRAT1-204ENST00000469750 FSIP1Q8NA03 581 aa18.27■□□□□ 0.52
BRAT1-204ENST00000469750 EHMT1Q9H9B1 1298 aa18.27■□□□□ 0.52
BRAT1-204ENST00000469750 TSPY2A6NKD2 308 aa18.27■□□□□ 0.52
BRAT1-204ENST00000469750 STX6O43752 255 aa18.27■□□□□ 0.52
BRAT1-204ENST00000469750 ALDH1L1O75891 902 aa18.27■□□□□ 0.52
BRAT1-204ENST00000469750 JAKMIP3Q5VZ66 844 aa18.27■□□□□ 0.52
BRAT1-204ENST00000469750 PPP4R3AQ6IN85 833 aa18.27■□□□□ 0.52
BRAT1-204ENST00000469750 KIF2AO00139 706 aaPredicted RBP18.27■□□□□ 0.51
BRAT1-204ENST00000469750 KIF20AO95235 890 aa18.27■□□□□ 0.51
BRAT1-204ENST00000469750 FGFR1OPO95684 399 aaKnown RBP18.27■□□□□ 0.51
BRAT1-204ENST00000469750 SPA17Q15506 151 aa18.27■□□□□ 0.51
BRAT1-204ENST00000469750 ITSN2Q9NZM3 1697 aa18.27■□□□□ 0.51
BRAT1-204ENST00000469750 NUCB1Q02818 461 aa18.26■□□□□ 0.51
BRAT1-204ENST00000469750 NBPF6Q5VWK0 638 aa18.26■□□□□ 0.51
BRAT1-204ENST00000469750 ZSCAN30Q86W11 494 aa18.26■□□□□ 0.51
BRAT1-204ENST00000469750 NBPF5PQ86XG9 351 aaPredicted RBP18.26■□□□□ 0.51
BRAT1-204ENST00000469750 ANKRD18AQ8IVF6 992 aa18.26■□□□□ 0.51
BRAT1-204ENST00000469750 NBPF4Q96M43 638 aa18.26■□□□□ 0.51
BRAT1-204ENST00000469750 ORC3Q9UBD5 711 aaPredicted RBP18.26■□□□□ 0.51
BRAT1-204ENST00000469750 COPS6Q7L5N1 327 aa18.26■□□□□ 0.51
BRAT1-204ENST00000469750 UBA5Q9GZZ9 404 aa18.26■□□□□ 0.51
BRAT1-204ENST00000469750 PRAG1Q86YV5 1406 aa18.26■□□□□ 0.51
BRAT1-204ENST00000469750 ZSCAN12O43309 604 aa18.26■□□□□ 0.51
BRAT1-204ENST00000469750 WDHD1O75717 1129 aaPredicted RBP18.26■□□□□ 0.51
BRAT1-204ENST00000469750 EIF4A2Q14240 407 aaKnown RBP18.26■□□□□ 0.51
BRAT1-204ENST00000469750 MICU3Q86XE3 530 aa18.26■□□□□ 0.51
BRAT1-204ENST00000469750 CCDC148Q8NFR7 591 aa18.26■□□□□ 0.51
BRAT1-204ENST00000469750 KAT14Q9H8E8 782 aa18.26■□□□□ 0.51
BRAT1-204ENST00000469750 PTPRKQ15262 1439 aa18.25■□□□□ 0.51
BRAT1-204ENST00000469750 NUP153P49790 1475 aaKnown RBP18.25■□□□□ 0.51
BRAT1-204ENST00000469750 TOP1P11387 765 aaKnown RBP18.25■□□□□ 0.51
BRAT1-204ENST00000469750 TRIM21P19474 475 aaKnown RBP18.25■□□□□ 0.51
BRAT1-204ENST00000469750 METAP2P50579 478 aaKnown RBP eCLIP18.25■□□□□ 0.51
BRAT1-204ENST00000469750 CACNA2D4Q7Z3S7 1137 aa18.25■□□□□ 0.51
BRAT1-204ENST00000469750 UQCRHLA0A096LP55 91 aa18.25■□□□□ 0.51
BRAT1-204ENST00000469750 UQCRHP07919 91 aa18.25■□□□□ 0.51
BRAT1-204ENST00000469750 ZFYP08048 801 aaPredicted RBP18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms