RNA–Protein interactions for RNA: ENST00000469498.1

GAPVD1-213, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 385 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-213ENST00000469498 AFDNP55196 1824 aaKnown RBP10.86□□□□□ -0.67
GAPVD1-213ENST00000469498 TRIM37O94972 964 aa10.86□□□□□ -0.67
GAPVD1-213ENST00000469498 PLCB2Q00722 1185 aa10.86□□□□□ -0.67
GAPVD1-213ENST00000469498 ZNF790Q6PG37 636 aa10.86□□□□□ -0.67
GAPVD1-213ENST00000469498 BABAM1Q9NWV8 329 aa10.86□□□□□ -0.67
GAPVD1-213ENST00000469498 ASAP1Q9ULH1 1129 aa10.86□□□□□ -0.67
GAPVD1-213ENST00000469498 UBR3Q6ZT12 1888 aa10.86□□□□□ -0.67
GAPVD1-213ENST00000469498 PALLDQ8WX93 1383 aa10.86□□□□□ -0.67
GAPVD1-213ENST00000469498 C4AP0C0L4 1744 aa10.86□□□□□ -0.67
GAPVD1-213ENST00000469498 C4BP0C0L5 1744 aa10.86□□□□□ -0.67
GAPVD1-213ENST00000469498 ARFGEF2Q9Y6D5 1785 aa10.85□□□□□ -0.67
GAPVD1-213ENST00000469498 ELL2O00472 640 aaPredicted RBP10.85□□□□□ -0.67
GAPVD1-213ENST00000469498 C3orf67Q6ZVT6 689 aa10.85□□□□□ -0.67
GAPVD1-213ENST00000469498 ATG3Q9NT62 314 aa10.85□□□□□ -0.67
GAPVD1-213ENST00000469498 STK24Q9Y6E0 443 aa10.85□□□□□ -0.67
GAPVD1-213ENST00000469498 ANKRD36CQ5JPF3 1778 aa10.85□□□□□ -0.67
GAPVD1-213ENST00000469498 FAM205CA6NFA0 338 aa10.84□□□□□ -0.67
GAPVD1-213ENST00000469498 PTCD1O75127 700 aaKnown RBP10.84□□□□□ -0.67
GAPVD1-213ENST00000469498 EIF4A1P60842 406 aaKnown RBP10.84□□□□□ -0.67
GAPVD1-213ENST00000469498 TSPYL6Q8N831 410 aa10.84□□□□□ -0.67
GAPVD1-213ENST00000469498 C8orf58Q8NAV2 365 aa10.84□□□□□ -0.67
GAPVD1-213ENST00000469498 ZNF496Q96IT1 587 aaPredicted RBP10.84□□□□□ -0.67
GAPVD1-213ENST00000469498 HEG1Q9ULI3 1381 aa10.84□□□□□ -0.67
GAPVD1-213ENST00000469498 BCORQ6W2J9 1755 aa10.84□□□□□ -0.67
GAPVD1-213ENST00000469498 CENPBP07199 599 aaPredicted RBP10.83□□□□□ -0.68
GAPVD1-213ENST00000469498 TWISTNBQ3B726 338 aaPredicted RBP10.83□□□□□ -0.68
GAPVD1-213ENST00000469498 FMNL2Q96PY5 1086 aa10.83□□□□□ -0.68
GAPVD1-213ENST00000469498 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.83□□□□□ -0.68
GAPVD1-213ENST00000469498 NUP98P52948 1817 aa10.83□□□□□ -0.68
GAPVD1-213ENST00000469498 QSER1Q2KHR3 1735 aa10.82□□□□□ -0.68
GAPVD1-213ENST00000469498 PRAMEF22A3QJZ6 481 aa10.82□□□□□ -0.68
GAPVD1-213ENST00000469498 SMARCC1Q92922 1105 aaPredicted RBP10.82□□□□□ -0.68
GAPVD1-213ENST00000469498 TCERG1O14776 1098 aaKnown RBP10.81□□□□□ -0.68
GAPVD1-213ENST00000469498 NECTIN2Q92692 538 aa10.81□□□□□ -0.68
GAPVD1-213ENST00000469498 SCN7AQ01118 1682 aa10.81□□□□□ -0.68
GAPVD1-213ENST00000469498 CASZ1Q86V15 1759 aa10.8□□□□□ -0.68
GAPVD1-213ENST00000469498 EP400Q96L91 3159 aa10.8□□□□□ -0.68
GAPVD1-213ENST00000469498 GIGYF1O75420 1035 aaPredicted RBP10.8□□□□□ -0.68
GAPVD1-213ENST00000469498 SLC4A9Q96Q91 983 aa10.8□□□□□ -0.68
GAPVD1-213ENST00000469498 BCL2L13Q9BXK5 485 aa10.8□□□□□ -0.68
GAPVD1-213ENST00000469498 LOC102724428A0A0B4J2F2 783 aa10.79□□□□□ -0.68
GAPVD1-213ENST00000469498 VAMP4O75379 141 aa10.79□□□□□ -0.68
GAPVD1-213ENST00000469498 APBA3O96018 575 aa10.79□□□□□ -0.68
GAPVD1-213ENST00000469498 SNRPA1P09661 255 aaKnown RBP10.79□□□□□ -0.68
GAPVD1-213ENST00000469498 EIF2S2P20042 333 aaKnown RBP10.79□□□□□ -0.68
GAPVD1-213ENST00000469498 KCNQ4P56696 695 aa10.79□□□□□ -0.68
GAPVD1-213ENST00000469498 SIK1P57059 783 aa10.79□□□□□ -0.68
GAPVD1-213ENST00000469498 HDGFL1Q5TGJ6 251 aa10.79□□□□□ -0.68
GAPVD1-213ENST00000469498 PAXIP1Q6ZW49 1069 aaPredicted RBP10.79□□□□□ -0.68
GAPVD1-213ENST00000469498 DNAJC10Q8IXB1 793 aa10.79□□□□□ -0.68
GAPVD1-213ENST00000469498 RCAN3Q9UKA8 241 aa10.79□□□□□ -0.68
GAPVD1-213ENST00000469498 HOXB7P09629 217 aa10.78□□□□□ -0.68
GAPVD1-213ENST00000469498 ATP6V1AP38606 617 aa10.78□□□□□ -0.68
GAPVD1-213ENST00000469498 ITPK1Q13572 414 aa10.78□□□□□ -0.68
GAPVD1-213ENST00000469498 SMC4Q9NTJ3 1288 aa10.78□□□□□ -0.68
GAPVD1-213ENST00000469498 CCNL1Q9UK58 526 aaPredicted RBP10.78□□□□□ -0.68
GAPVD1-213ENST00000469498 SOS1Q07889 1333 aaPredicted RBP10.78□□□□□ -0.68
GAPVD1-213ENST00000469498 CT47B1P0C2W7 299 aaPredicted RBP10.77□□□□□ -0.69
GAPVD1-213ENST00000469498 PIP4K2AP48426 406 aaPredicted RBP10.77□□□□□ -0.69
GAPVD1-213ENST00000469498 VSIG10Q8N0Z9 540 aa10.77□□□□□ -0.69
GAPVD1-213ENST00000469498 CHPF2Q9P2E5 772 aa10.77□□□□□ -0.69
GAPVD1-213ENST00000469498 USP16Q9Y5T5 823 aa10.77□□□□□ -0.69
GAPVD1-213ENST00000469498 BCAR3O75815 825 aa10.76□□□□□ -0.69
GAPVD1-213ENST00000469498 ANXA1P04083 346 aa10.76□□□□□ -0.69
GAPVD1-213ENST00000469498 RARSP54136 660 aaKnown RBP10.76□□□□□ -0.69
GAPVD1-213ENST00000469498 SF3B2Q13435 895 aaKnown RBP10.76□□□□□ -0.69
GAPVD1-213ENST00000469498 CCDC30Q5VVM6 783 aa10.76□□□□□ -0.69
GAPVD1-213ENST00000469498 SPRYD3Q8NCJ5 442 aa10.76□□□□□ -0.69
GAPVD1-213ENST00000469498 LINC00116Q8NCU8 138 aa10.76□□□□□ -0.69
GAPVD1-213ENST00000469498 SSH1Q8WYL5 1049 aa10.76□□□□□ -0.69
GAPVD1-213ENST00000469498 L3MBTL3Q96JM7 780 aaPredicted RBP10.76□□□□□ -0.69
GAPVD1-213ENST00000469498 STK31Q9BXU1 1019 aa10.76□□□□□ -0.69
GAPVD1-213ENST00000469498 GTPBP6O43824 516 aaPredicted RBP10.75□□□□□ -0.69
GAPVD1-213ENST00000469498 CYP19A1P11511 503 aaPredicted RBP10.75□□□□□ -0.69
GAPVD1-213ENST00000469498 PROSER3Q2NL68 480 aa10.75□□□□□ -0.69
GAPVD1-213ENST00000469498 ILDR2Q71H61 639 aa10.75□□□□□ -0.69
GAPVD1-213ENST00000469498 RNF166Q96A37 237 aaPredicted RBP10.75□□□□□ -0.69
GAPVD1-213ENST00000469498 POTEB3A0JP26 581 aa10.74□□□□□ -0.69
GAPVD1-213ENST00000469498 STARD3NLO95772 234 aa10.74□□□□□ -0.69
GAPVD1-213ENST00000469498 A1BGP04217 495 aa10.74□□□□□ -0.69
GAPVD1-213ENST00000469498 MYL6BP14649 208 aa10.74□□□□□ -0.69
GAPVD1-213ENST00000469498 CRKLP46109 303 aaKnown RBP10.74□□□□□ -0.69
GAPVD1-213ENST00000469498 BAG6P46379 1132 aa10.74□□□□□ -0.69
GAPVD1-213ENST00000469498 EN1Q05925 392 aaPredicted RBP10.74□□□□□ -0.69
GAPVD1-213ENST00000469498 TXNRD1Q16881 649 aa10.74□□□□□ -0.69
GAPVD1-213ENST00000469498 ALDH1L2Q3SY69 923 aa10.74□□□□□ -0.69
GAPVD1-213ENST00000469498 POTEBQ6S5H4 581 aa10.74□□□□□ -0.69
GAPVD1-213ENST00000469498 DEFB132Q7Z7B7 95 aa10.74□□□□□ -0.69
GAPVD1-213ENST00000469498 MRPL50Q8N5N7 158 aaKnown RBP10.74□□□□□ -0.69
GAPVD1-213ENST00000469498 ZNF428Q96B54 188 aa10.74□□□□□ -0.69
GAPVD1-213ENST00000469498 TEX13AQ9BXU3 409 aaPredicted RBP10.74□□□□□ -0.69
GAPVD1-213ENST00000469498 LRRC4BQ9NT99 713 aa10.74□□□□□ -0.69
GAPVD1-213ENST00000469498 ZNF330Q9Y3S2 320 aaPredicted RBP10.74□□□□□ -0.69
GAPVD1-213ENST00000469498 MYH3P11055 1940 aa10.74□□□□□ -0.69
GAPVD1-213ENST00000469498 NBPF26B4DH59 902 aa10.73□□□□□ -0.69
GAPVD1-213ENST00000469498 PLSCR1O15162 318 aa10.73□□□□□ -0.69
GAPVD1-213ENST00000469498 CANXP27824 592 aaKnown RBP10.73□□□□□ -0.69
GAPVD1-213ENST00000469498 EZH2Q15910 746 aaKnown RBP10.73□□□□□ -0.69
GAPVD1-213ENST00000469498 SLC27A3Q5K4L6 730 aa10.73□□□□□ -0.69
GAPVD1-213ENST00000469498 NBPF14Q5TI25 921 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms