RNA–Protein interactions for RNA: ENST00000469463.1

TPR-204, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 5

Gene TPR, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-204ENST00000469463 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.57□□□□□ -1.36
TPR-204ENST00000469463 TRIM11Q96F44 468 aa6.57□□□□□ -1.36
TPR-204ENST00000469463 PLVAPQ9BX97 442 aa6.57□□□□□ -1.36
TPR-204ENST00000469463 CHMP3Q9Y3E7 222 aa6.57□□□□□ -1.36
TPR-204ENST00000469463 PARP3Q9Y6F1 533 aa6.57□□□□□ -1.36
TPR-204ENST00000469463 GATA4P43694 442 aa6.56□□□□□ -1.36
TPR-204ENST00000469463 ATP1A2P50993 1020 aa6.56□□□□□ -1.36
TPR-204ENST00000469463 EPHA4P54764 986 aa6.56□□□□□ -1.36
TPR-204ENST00000469463 SLC9A9Q8IVB4 645 aa6.56□□□□□ -1.36
TPR-204ENST00000469463 ZDHHC1Q8WTX9 485 aa6.56□□□□□ -1.36
TPR-204ENST00000469463 POM121Q96HA1 1249 aa6.56□□□□□ -1.36
TPR-204ENST00000469463 MDFIQ99750 246 aa6.56□□□□□ -1.36
TPR-204ENST00000469463 STRN4Q9NRL3 753 aa6.56□□□□□ -1.36
TPR-204ENST00000469463 ZNF232Q9UNY5 417 aa6.56□□□□□ -1.36
TPR-204ENST00000469463 SERTM1A2A2V5 107 aa6.55□□□□□ -1.36
TPR-204ENST00000469463 USP17L5A8MUK1 530 aa6.55□□□□□ -1.36
TPR-204ENST00000469463 C1orf53Q5VUE5 145 aa6.55□□□□□ -1.36
TPR-204ENST00000469463 LRRC69Q6ZNQ3 347 aa6.55□□□□□ -1.36
TPR-204ENST00000469463 RHPN1Q8TCX5 695 aa6.55□□□□□ -1.36
TPR-204ENST00000469463 TNFRSF25Q93038 417 aa6.55□□□□□ -1.36
TPR-204ENST00000469463 PRDM6Q9NQX0 595 aa6.55□□□□□ -1.36
TPR-204ENST00000469463 ANKIB1Q9P2G1 1089 aa6.55□□□□□ -1.36
TPR-204ENST00000469463 APBA3O96018 575 aa6.54□□□□□ -1.36
TPR-204ENST00000469463 HIRAP54198 1017 aaPredicted RBP6.54□□□□□ -1.36
TPR-204ENST00000469463 PSMA6P60900 246 aaKnown RBP6.54□□□□□ -1.36
TPR-204ENST00000469463 PLEKHM2Q8IWE5 1019 aa6.54□□□□□ -1.36
TPR-204ENST00000469463 NACC1Q96RE7 527 aa6.54□□□□□ -1.36
TPR-204ENST00000469463 M0R2N6 131 aa6.53□□□□□ -1.36
TPR-204ENST00000469463 C14orf37Q86TY3 774 aa6.53□□□□□ -1.36
TPR-204ENST00000469463 CLUAP1Q96AJ1 413 aa6.53□□□□□ -1.36
TPR-204ENST00000469463 DOC2BQ14184 412 aa6.52□□□□□ -1.37
TPR-204ENST00000469463 HIF1AQ16665 826 aa6.52□□□□□ -1.37
TPR-204ENST00000469463 POTEAQ6S8J7 498 aa6.52□□□□□ -1.37
TPR-204ENST00000469463 TNS4Q8IZW8 715 aa6.52□□□□□ -1.37
TPR-204ENST00000469463 M0R082 166 aa6.51□□□□□ -1.37
TPR-204ENST00000469463 KCNQ4P56696 695 aa6.51□□□□□ -1.37
TPR-204ENST00000469463 SPEM2Q0P670 501 aa6.51□□□□□ -1.37
TPR-204ENST00000469463 CCDC102BQ68D86 513 aa6.51□□□□□ -1.37
TPR-204ENST00000469463 DEPDC4Q8N2C3 294 aa6.51□□□□□ -1.37
TPR-204ENST00000469463 LARGE2Q8N3Y3 721 aa6.51□□□□□ -1.37
TPR-204ENST00000469463 TPCN2Q8NHX9 752 aa6.51□□□□□ -1.37
TPR-204ENST00000469463 ZNF417Q8TAU3 575 aa6.51□□□□□ -1.37
TPR-204ENST00000469463 C7orf43Q8WVR3 580 aa6.51□□□□□ -1.37
TPR-204ENST00000469463 ZNF587Q96SQ5 575 aaPredicted RBP6.51□□□□□ -1.37
TPR-204ENST00000469463 SEMA6BQ9H3T3 888 aa6.51□□□□□ -1.37
TPR-204ENST00000469463 EFCC1Q9HA90 598 aa6.51□□□□□ -1.37
TPR-204ENST00000469463 BRD7Q9NPI1 651 aa6.51□□□□□ -1.37
TPR-204ENST00000469463 ADH7P40394 386 aa6.5□□□□□ -1.37
TPR-204ENST00000469463 SFSWAPQ12872 951 aaKnown RBP6.5□□□□□ -1.37
TPR-204ENST00000469463 TBCELQ5QJ74 424 aa6.5□□□□□ -1.37
TPR-204ENST00000469463 SLC30A3Q99726 388 aa6.5□□□□□ -1.37
TPR-204ENST00000469463 RBM19Q9Y4C8 960 aaKnown RBP6.5□□□□□ -1.37
TPR-204ENST00000469463 USP17L3A6NCW0 530 aa6.49□□□□□ -1.37
TPR-204ENST00000469463 USP17L4A6NCW7 530 aa6.49□□□□□ -1.37
TPR-204ENST00000469463 PALM3A6NDB9 673 aaPredicted RBP6.49□□□□□ -1.37
TPR-204ENST00000469463 TRIM28Q13263 835 aaKnown RBP6.49□□□□□ -1.37
TPR-204ENST00000469463 USP17L2Q6R6M4 530 aa6.49□□□□□ -1.37
TPR-204ENST00000469463 USP17L1Q7RTZ2 530 aa6.49□□□□□ -1.37
TPR-204ENST00000469463 PROSER2Q86WR7 435 aaPredicted RBP6.49□□□□□ -1.37
TPR-204ENST00000469463 MICALL1Q8N3F8 863 aa6.49□□□□□ -1.37
TPR-204ENST00000469463 CEP63Q96MT8 703 aa6.49□□□□□ -1.37
TPR-204ENST00000469463 PHACTR1Q9C0D0 580 aa6.49□□□□□ -1.37
TPR-204ENST00000469463 TSPAN10Q9H1Z9 355 aaPredicted RBP6.49□□□□□ -1.37
TPR-204ENST00000469463 ATP9BO43861 1147 aa6.48□□□□□ -1.37
TPR-204ENST00000469463 TYRO3Q06418 890 aa6.48□□□□□ -1.37
TPR-204ENST00000469463 ZMYM1Q5SVZ6 1142 aa6.48□□□□□ -1.37
TPR-204ENST00000469463 SH3PXD2AQ5TCZ1 1133 aa6.48□□□□□ -1.37
TPR-204ENST00000469463 SIX5Q8N196 739 aa6.48□□□□□ -1.37
TPR-204ENST00000469463 KIAA1024Q9UPX6 916 aa6.48□□□□□ -1.37
TPR-204ENST00000469463 KCNH4Q9UQ05 1017 aa6.48□□□□□ -1.37
TPR-204ENST00000469463 ZBTB7BO15156 539 aaPredicted RBP6.47□□□□□ -1.37
TPR-204ENST00000469463 ALBP02768 609 aa6.47□□□□□ -1.37
TPR-204ENST00000469463 NID1P14543 1247 aa6.47□□□□□ -1.37
TPR-204ENST00000469463 ITGB7P26010 798 aa6.47□□□□□ -1.37
TPR-204ENST00000469463 CLDN10P78369 228 aa6.47□□□□□ -1.37
TPR-204ENST00000469463 COL9A3Q14050 684 aaPredicted RBP6.47□□□□□ -1.37
TPR-204ENST00000469463 RSPO4Q2I0M5 234 aaPredicted RBP6.47□□□□□ -1.37
TPR-204ENST00000469463 NKAPLQ5M9Q1 402 aa6.47□□□□□ -1.37
TPR-204ENST00000469463 STAG2Q8N3U4 1231 aa6.47□□□□□ -1.37
TPR-204ENST00000469463 OGFOD1Q8N543 542 aa6.47□□□□□ -1.37
TPR-204ENST00000469463 GAS2L2Q8NHY3 880 aa6.47□□□□□ -1.37
TPR-204ENST00000469463 STARD13Q9Y3M8 1113 aa6.47□□□□□ -1.37
TPR-204ENST00000469463 C9orf172C9J069 976 aa6.46□□□□□ -1.38
TPR-204ENST00000469463 LILRB5O75023 590 aa6.46□□□□□ -1.38
TPR-204ENST00000469463 HSH2DQ96JZ2 352 aa6.46□□□□□ -1.38
TPR-204ENST00000469463 SUSD3Q96L08 255 aa6.46□□□□□ -1.38
TPR-204ENST00000469463 TPSG1Q9NRR2 321 aa6.46□□□□□ -1.38
TPR-204ENST00000469463 MKRN1Q9UHC7 482 aaKnown RBP6.46□□□□□ -1.38
TPR-204ENST00000469463 HCN4Q9Y3Q4 1203 aa6.46□□□□□ -1.38
TPR-204ENST00000469463 SFI1A8K8P3 1242 aa6.45□□□□□ -1.38
TPR-204ENST00000469463 PPP1R12BO60237 982 aaPredicted RBP6.45□□□□□ -1.38
TPR-204ENST00000469463 C20orf204Q6ZNR8 217 aa6.45□□□□□ -1.38
TPR-204ENST00000469463 UCN2Q96RP3 112 aa6.45□□□□□ -1.38
TPR-204ENST00000469463 POM121CA8CG34 1229 aa6.44□□□□□ -1.38
TPR-204ENST00000469463 DYRK3O43781 588 aa6.44□□□□□ -1.38
TPR-204ENST00000469463 IER5Q5VY09 327 aa6.44□□□□□ -1.38
TPR-204ENST00000469463 RAB44Q7Z6P3 723 aaPredicted RBP6.44□□□□□ -1.38
TPR-204ENST00000469463 ALDH16A1Q8IZ83 802 aa6.44□□□□□ -1.38
TPR-204ENST00000469463 ADAMTS19Q8TE59 1207 aa6.44□□□□□ -1.38
TPR-204ENST00000469463 BHMTQ93088 406 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms