RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 SRGNP10124 158 aa16.39■□□□□ 0.21
HDAC3-204ENST00000469207 ERFEQ4G0M1 354 aa16.39■□□□□ 0.21
HDAC3-204ENST00000469207 TNRC6CQ9HCJ0 1690 aaKnown RBP16.38■□□□□ 0.21
HDAC3-204ENST00000469207 PRPF40BQ6NWY9 871 aaKnown RBP16.38■□□□□ 0.21
HDAC3-204ENST00000469207 OLFM4Q6UX06 510 aa16.38■□□□□ 0.21
HDAC3-204ENST00000469207 COL11A2P13942 1736 aaPredicted RBP16.38■□□□□ 0.21
HDAC3-204ENST00000469207 ZC3H4Q9UPT8 1303 aaKnown RBP16.38■□□□□ 0.21
HDAC3-204ENST00000469207 SLX4Q8IY92 1834 aa16.38■□□□□ 0.21
HDAC3-204ENST00000469207 SCN7AQ01118 1682 aa16.37■□□□□ 0.21
HDAC3-204ENST00000469207 DDNO94850 711 aaPredicted RBP16.37■□□□□ 0.21
HDAC3-204ENST00000469207 POTEIP0CG38 1075 aa16.37■□□□□ 0.21
HDAC3-204ENST00000469207 POTEJP0CG39 1038 aa16.37■□□□□ 0.21
HDAC3-204ENST00000469207 ST5P78524 1137 aa16.37■□□□□ 0.21
HDAC3-204ENST00000469207 HLFQ16534 295 aa16.37■□□□□ 0.21
HDAC3-204ENST00000469207 COL13A1Q5TAT6 717 aaPredicted RBP16.37■□□□□ 0.21
HDAC3-204ENST00000469207 DPY19L2Q6NUT2 758 aa16.37■□□□□ 0.21
HDAC3-204ENST00000469207 NBPF5PQ86XG9 351 aaPredicted RBP16.37■□□□□ 0.21
HDAC3-204ENST00000469207 NGEFQ8N5V2 710 aa16.37■□□□□ 0.21
HDAC3-204ENST00000469207 JMYQ8N9B5 988 aa16.37■□□□□ 0.21
HDAC3-204ENST00000469207 CNKSR1Q969H4 720 aa16.37■□□□□ 0.21
HDAC3-204ENST00000469207 PDZRN3Q9UPQ7 1066 aa16.37■□□□□ 0.21
HDAC3-204ENST00000469207 PCNTO95613 3336 aa16.36■□□□□ 0.21
HDAC3-204ENST00000469207 STYK1Q6J9G0 422 aa16.36■□□□□ 0.21
HDAC3-204ENST00000469207 MASTLQ96GX5 879 aa16.36■□□□□ 0.21
HDAC3-204ENST00000469207 TAOK3Q9H2K8 898 aa16.36■□□□□ 0.21
HDAC3-204ENST00000469207 TAF7Q15545 349 aaPredicted RBP16.35■□□□□ 0.21
HDAC3-204ENST00000469207 C7orf43Q8WVR3 580 aa16.35■□□□□ 0.21
HDAC3-204ENST00000469207 NIP7Q9Y221 180 aaKnown RBP eCLIP16.35■□□□□ 0.21
HDAC3-204ENST00000469207 TIAM2Q8IVF5 1701 aa16.35■□□□□ 0.21
HDAC3-204ENST00000469207 FER1L6Q2WGJ9 1857 aa16.35■□□□□ 0.21
HDAC3-204ENST00000469207 CLEC4GQ6UXB4 293 aa16.34■□□□□ 0.21
HDAC3-204ENST00000469207 THUMPD2Q9BTF0 503 aaKnown RBP16.34■□□□□ 0.21
HDAC3-204ENST00000469207 CACNA1SQ13698 1873 aa16.33■□□□□ 0.21
HDAC3-204ENST00000469207 HTATSF1O43719 755 aaKnown RBP16.32■□□□□ 0.2
HDAC3-204ENST00000469207 BCORQ6W2J9 1755 aa16.32■□□□□ 0.2
HDAC3-204ENST00000469207 TPTE2Q6XPS3 522 aa16.32■□□□□ 0.2
HDAC3-204ENST00000469207 LTBP3Q9NS15 1303 aa16.32■□□□□ 0.2
HDAC3-204ENST00000469207 KLRG2A4D1S0 409 aaPredicted RBP16.31■□□□□ 0.2
HDAC3-204ENST00000469207 NPR1P16066 1061 aa16.31■□□□□ 0.2
HDAC3-204ENST00000469207 ZNF277Q9NRM2 450 aaPredicted RBP16.31■□□□□ 0.2
HDAC3-204ENST00000469207 ZNF652Q9Y2D9 606 aa16.31■□□□□ 0.2
HDAC3-204ENST00000469207 RRP7AQ9Y3A4 280 aaKnown RBP16.31■□□□□ 0.2
HDAC3-204ENST00000469207 DICER1Q9UPY3 1922 aaKnown RBP16.3■□□□□ 0.2
HDAC3-204ENST00000469207 TTLL7Q6ZT98 887 aa16.3■□□□□ 0.2
HDAC3-204ENST00000469207 NUTM1Q86Y26 1132 aa16.3■□□□□ 0.2
HDAC3-204ENST00000469207 PLEKHF1Q96S99 279 aa16.3■□□□□ 0.2
HDAC3-204ENST00000469207 SLC51AQ86UW1 340 aa16.29■□□□□ 0.2
HDAC3-204ENST00000469207 MYL6BP14649 208 aa16.28■□□□□ 0.2
HDAC3-204ENST00000469207 GTF2E1P29083 439 aaPredicted RBP16.28■□□□□ 0.2
HDAC3-204ENST00000469207 EIF4A1P60842 406 aaKnown RBP16.28■□□□□ 0.2
HDAC3-204ENST00000469207 CCDC93Q567U6 631 aa16.28■□□□□ 0.2
HDAC3-204ENST00000469207 CHADLQ6NUI6 762 aa16.28■□□□□ 0.2
HDAC3-204ENST00000469207 ZNF541Q9H0D2 1346 aa16.27■□□□□ 0.2
HDAC3-204ENST00000469207 CAPN15O75808 1086 aa16.27■□□□□ 0.2
HDAC3-204ENST00000469207 HSPA1AP0DMV8 641 aaKnown RBP16.27■□□□□ 0.2
HDAC3-204ENST00000469207 HSPA1BP0DMV9 641 aaKnown RBP16.27■□□□□ 0.2
HDAC3-204ENST00000469207 FKBP4Q02790 459 aaKnown RBP eCLIP16.27■□□□□ 0.2
HDAC3-204ENST00000469207 SOGA3Q5TF21 947 aa16.27■□□□□ 0.2
HDAC3-204ENST00000469207 MKRN1Q9UHC7 482 aaKnown RBP16.27■□□□□ 0.2
HDAC3-204ENST00000469207 GPTP24298 496 aa16.26■□□□□ 0.19
HDAC3-204ENST00000469207 SYNE4Q8N205 404 aa16.26■□□□□ 0.19
HDAC3-204ENST00000469207 ZBTB3Q9H5J0 574 aa16.26■□□□□ 0.19
HDAC3-204ENST00000469207 TCERG1O14776 1098 aaKnown RBP16.25■□□□□ 0.19
HDAC3-204ENST00000469207 ALDH1B1P30837 517 aa16.25■□□□□ 0.19
HDAC3-204ENST00000469207 NFE2L2Q16236 605 aa16.25■□□□□ 0.19
HDAC3-204ENST00000469207 TAF1DQ9H5J8 278 aaPredicted RBP16.25■□□□□ 0.19
HDAC3-204ENST00000469207 DLG5Q8TDM6 1919 aa16.25■□□□□ 0.19
HDAC3-204ENST00000469207 ABCC12Q96J65 1359 aa16.25■□□□□ 0.19
HDAC3-204ENST00000469207 NEFMP07197 916 aa16.24■□□□□ 0.19
HDAC3-204ENST00000469207 EAPPQ56P03 285 aaPredicted RBP16.24■□□□□ 0.19
HDAC3-204ENST00000469207 SUSD4Q5VX71 490 aa16.24■□□□□ 0.19
HDAC3-204ENST00000469207 ARFGEF2Q9Y6D5 1785 aa16.23■□□□□ 0.19
HDAC3-204ENST00000469207 MAP3K15Q6ZN16 1313 aa16.23■□□□□ 0.19
HDAC3-204ENST00000469207 UBN2Q6ZU65 1347 aa16.23■□□□□ 0.19
HDAC3-204ENST00000469207 ERVV-1B6SEH8 477 aa16.23■□□□□ 0.19
HDAC3-204ENST00000469207 IARSP41252 1262 aaKnown RBP16.23■□□□□ 0.19
HDAC3-204ENST00000469207 C3orf67Q6ZVT6 689 aa16.23■□□□□ 0.19
HDAC3-204ENST00000469207 RTKN2Q8IZC4 609 aa16.23■□□□□ 0.19
HDAC3-204ENST00000469207 TNS4Q8IZW8 715 aa16.23■□□□□ 0.19
HDAC3-204ENST00000469207 PNISRQ8TF01 805 aaKnown RBP16.23■□□□□ 0.19
HDAC3-204ENST00000469207 L3MBTL3Q96JM7 780 aaPredicted RBP16.23■□□□□ 0.19
HDAC3-204ENST00000469207 RGL2O15211 777 aa16.22■□□□□ 0.19
HDAC3-204ENST00000469207 ITGBL1O95965 494 aaPredicted RBP16.22■□□□□ 0.19
HDAC3-204ENST00000469207 ANXA1P04083 346 aa16.22■□□□□ 0.19
HDAC3-204ENST00000469207 EIF2S2P20042 333 aaKnown RBP16.22■□□□□ 0.19
HDAC3-204ENST00000469207 CREBZFQ9NS37 354 aa16.22■□□□□ 0.19
HDAC3-204ENST00000469207 CLEC11AQ9Y240 323 aa16.22■□□□□ 0.19
HDAC3-204ENST00000469207 RNF123Q5XPI4 1314 aa16.21■□□□□ 0.19
HDAC3-204ENST00000469207 IQCA1LA6NCM1 817 aa16.21■□□□□ 0.19
HDAC3-204ENST00000469207 FZD9O00144 591 aa16.21■□□□□ 0.19
HDAC3-204ENST00000469207 CRY2Q49AN0 593 aa16.21■□□□□ 0.19
HDAC3-204ENST00000469207 KIF6Q6ZMV9 814 aa16.21■□□□□ 0.19
HDAC3-204ENST00000469207 LDHDQ86WU2 507 aa16.21■□□□□ 0.19
HDAC3-204ENST00000469207 ZNF34Q8IZ26 560 aa16.21■□□□□ 0.19
HDAC3-204ENST00000469207 PASKQ96RG2 1323 aa16.2■□□□□ 0.18
HDAC3-204ENST00000469207 NUP98P52948 1817 aa16.2■□□□□ 0.18
HDAC3-204ENST00000469207 EPHX2P34913 555 aa16.2■□□□□ 0.18
HDAC3-204ENST00000469207 RIPK4P57078 832 aa16.2■□□□□ 0.18
HDAC3-204ENST00000469207 PROSER3Q2NL68 480 aa16.2■□□□□ 0.18
HDAC3-204ENST00000469207 MAP1SQ66K74 1059 aaPredicted RBP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 258.8 ms