RNA–Protein interactions for RNA: ENST00000468876.1

ARHGEF39-202, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 2

Gene ARHGEF39, Length 739 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-202ENST00000468876 INTS5Q6P9B9 1019 aaKnown RBP15.94■□□□□ 0.14
ARHGEF39-202ENST00000468876 PDZRN3Q9UPQ7 1066 aa15.94■□□□□ 0.14
ARHGEF39-202ENST00000468876 AMER1Q5JTC6 1135 aaPredicted RBP15.93■□□□□ 0.14
ARHGEF39-202ENST00000468876 MORC1Q86VD1 984 aa15.93■□□□□ 0.14
ARHGEF39-202ENST00000468876 CCDC24Q8N4L8 307 aa15.93■□□□□ 0.14
ARHGEF39-202ENST00000468876 NARFQ9UHQ1 456 aa15.93■□□□□ 0.14
ARHGEF39-202ENST00000468876 CNKSR1Q969H4 720 aa15.92■□□□□ 0.14
ARHGEF39-202ENST00000468876 ZNF277Q9NRM2 450 aaPredicted RBP15.92■□□□□ 0.14
ARHGEF39-202ENST00000468876 NRXN2Q9P2S2 1712 aa15.91■□□□□ 0.14
ARHGEF39-202ENST00000468876 HSP90AB1P08238 724 aaKnown RBP15.91■□□□□ 0.14
ARHGEF39-202ENST00000468876 LMOD1P29536 600 aaPredicted RBP15.91■□□□□ 0.14
ARHGEF39-202ENST00000468876 PRPF40BQ6NWY9 871 aaKnown RBP15.91■□□□□ 0.14
ARHGEF39-202ENST00000468876 BRIP1Q9BX63 1249 aa15.91■□□□□ 0.14
ARHGEF39-202ENST00000468876 SOS1Q07889 1333 aaPredicted RBP15.91■□□□□ 0.14
ARHGEF39-202ENST00000468876 NPHP1O15259 732 aa15.89■□□□□ 0.13
ARHGEF39-202ENST00000468876 CELF2O95319 508 aaKnown RBP15.89■□□□□ 0.13
ARHGEF39-202ENST00000468876 FXR1P51114 621 aaKnown RBP eCLIP15.89■□□□□ 0.13
ARHGEF39-202ENST00000468876 SAPCD2Q86UD0 394 aa15.89■□□□□ 0.13
ARHGEF39-202ENST00000468876 BCL2L12Q9HB09 334 aa15.89■□□□□ 0.13
ARHGEF39-202ENST00000468876 KNSTRNQ9Y448 316 aa15.89■□□□□ 0.13
ARHGEF39-202ENST00000468876 GJA3Q9Y6H8 435 aa15.89■□□□□ 0.13
ARHGEF39-202ENST00000468876 COL15A1P39059 1388 aa15.88■□□□□ 0.13
ARHGEF39-202ENST00000468876 CCDC93Q567U6 631 aa15.88■□□□□ 0.13
ARHGEF39-202ENST00000468876 ZNF530Q6P9A1 599 aaPredicted RBP15.88■□□□□ 0.13
ARHGEF39-202ENST00000468876 DNAJC10Q8IXB1 793 aa15.88■□□□□ 0.13
ARHGEF39-202ENST00000468876 GPC2Q8N158 579 aa15.88■□□□□ 0.13
ARHGEF39-202ENST00000468876 COL3A1P02461 1466 aaPredicted RBP15.88■□□□□ 0.13
ARHGEF39-202ENST00000468876 IL13P35225 146 aa15.87■□□□□ 0.13
ARHGEF39-202ENST00000468876 FKBP4Q02790 459 aaKnown RBP eCLIP15.87■□□□□ 0.13
ARHGEF39-202ENST00000468876 ADAMTS7Q9UKP4 1686 aa15.86■□□□□ 0.13
ARHGEF39-202ENST00000468876 NOGQ13253 232 aa15.86■□□□□ 0.13
ARHGEF39-202ENST00000468876 SULT6B1Q6IMI4 303 aa15.86■□□□□ 0.13
ARHGEF39-202ENST00000468876 STYK1Q6J9G0 422 aa15.86■□□□□ 0.13
ARHGEF39-202ENST00000468876 CTU1Q7Z7A3 348 aaKnown RBP15.86■□□□□ 0.13
ARHGEF39-202ENST00000468876 ZIC5Q96T25 663 aa15.86■□□□□ 0.13
ARHGEF39-202ENST00000468876 ZNF408Q9H9D4 720 aa15.86■□□□□ 0.13
ARHGEF39-202ENST00000468876 HPS5Q9UPZ3 1129 aa15.86■□□□□ 0.13
ARHGEF39-202ENST00000468876 TJP1Q07157 1748 aa15.85■□□□□ 0.13
ARHGEF39-202ENST00000468876 PER1O15534 1290 aaPredicted RBP15.85■□□□□ 0.13
ARHGEF39-202ENST00000468876 PRR5LQ6MZQ0 368 aa15.85■□□□□ 0.13
ARHGEF39-202ENST00000468876 HHIPL1Q96JK4 782 aa15.85■□□□□ 0.13
ARHGEF39-202ENST00000468876 SCN11AQ9UI33 1791 aa15.85■□□□□ 0.13
ARHGEF39-202ENST00000468876 AKAP4Q5JQC9 854 aa15.84■□□□□ 0.13
ARHGEF39-202ENST00000468876 CC2D1BQ5T0F9 858 aaKnown RBP15.84■□□□□ 0.13
ARHGEF39-202ENST00000468876 NFATC2IPQ8NCF5 419 aa15.84■□□□□ 0.13
ARHGEF39-202ENST00000468876 MASTLQ96GX5 879 aa15.84■□□□□ 0.13
ARHGEF39-202ENST00000468876 COL11A2P13942 1736 aaPredicted RBP15.84■□□□□ 0.13
ARHGEF39-202ENST00000468876 SLX4Q8IY92 1834 aa15.84■□□□□ 0.13
ARHGEF39-202ENST00000468876 MRC1P22897 1456 aa15.84■□□□□ 0.13
ARHGEF39-202ENST00000468876 TRPM7Q96QT4 1865 aa15.83■□□□□ 0.12
ARHGEF39-202ENST00000468876 FZD9O00144 591 aa15.83■□□□□ 0.12
ARHGEF39-202ENST00000468876 EPS15P42566 896 aa15.83■□□□□ 0.12
ARHGEF39-202ENST00000468876 MTHFSP49914 203 aa15.83■□□□□ 0.12
ARHGEF39-202ENST00000468876 EIF6P56537 245 aaKnown RBP15.83■□□□□ 0.12
ARHGEF39-202ENST00000468876 PLEKHO1Q53GL0 409 aaPredicted RBP15.83■□□□□ 0.12
ARHGEF39-202ENST00000468876 SLC17A8Q8NDX2 589 aa15.83■□□□□ 0.12
ARHGEF39-202ENST00000468876 JDP2Q8WYK2 163 aa15.83■□□□□ 0.12
ARHGEF39-202ENST00000468876 ZBTB1Q9Y2K1 713 aa15.83■□□□□ 0.12
ARHGEF39-202ENST00000468876 TRPA1O75762 1119 aa15.82■□□□□ 0.12
ARHGEF39-202ENST00000468876 SRGNP10124 158 aa15.82■□□□□ 0.12
ARHGEF39-202ENST00000468876 IARSP41252 1262 aaKnown RBP15.82■□□□□ 0.12
ARHGEF39-202ENST00000468876 CNGB1Q14028 1251 aaPredicted RBP15.82■□□□□ 0.12
ARHGEF39-202ENST00000468876 TBC1D9BQ66K14 1250 aa15.82■□□□□ 0.12
ARHGEF39-202ENST00000468876 USP50Q70EL3 339 aaPredicted RBP15.82■□□□□ 0.12
ARHGEF39-202ENST00000468876 SAGE1Q9NXZ1 904 aa15.82■□□□□ 0.12
ARHGEF39-202ENST00000468876 ANKRD31Q8N7Z5 1873 aa15.82■□□□□ 0.12
ARHGEF39-202ENST00000468876 HMOX1P09601 288 aa15.81■□□□□ 0.12
ARHGEF39-202ENST00000468876 CYP19A1P11511 503 aaPredicted RBP15.81■□□□□ 0.12
ARHGEF39-202ENST00000468876 ST5P78524 1137 aa15.81■□□□□ 0.12
ARHGEF39-202ENST00000468876 AMOTQ4VCS5 1084 aa15.81■□□□□ 0.12
ARHGEF39-202ENST00000468876 CNBD1Q8NA66 436 aa15.81■□□□□ 0.12
ARHGEF39-202ENST00000468876 CACNA1SQ13698 1873 aa15.8■□□□□ 0.12
ARHGEF39-202ENST00000468876 CANXP27824 592 aaKnown RBP15.8■□□□□ 0.12
ARHGEF39-202ENST00000468876 RTKN2Q8IZC4 609 aa15.8■□□□□ 0.12
ARHGEF39-202ENST00000468876 SYNE4Q8N205 404 aa15.8■□□□□ 0.12
ARHGEF39-202ENST00000468876 C1orf141Q5JVX7 400 aa15.79■□□□□ 0.12
ARHGEF39-202ENST00000468876 OLFM4Q6UX06 510 aa15.79■□□□□ 0.12
ARHGEF39-202ENST00000468876 C7orf43Q8WVR3 580 aa15.79■□□□□ 0.12
ARHGEF39-202ENST00000468876 GLIS2Q9BZE0 524 aaPredicted RBP15.79■□□□□ 0.12
ARHGEF39-202ENST00000468876 RNF186Q9NXI6 227 aa15.79■□□□□ 0.12
ARHGEF39-202ENST00000468876 SCNN1DP51172 638 aa15.78■□□□□ 0.12
ARHGEF39-202ENST00000468876 HUNKP57058 714 aa15.78■□□□□ 0.12
ARHGEF39-202ENST00000468876 NPC1L1Q9UHC9 1359 aa15.77■□□□□ 0.12
ARHGEF39-202ENST00000468876 A0A087WZG4 1122 aa15.77■□□□□ 0.12
ARHGEF39-202ENST00000468876 HDAC9Q9UKV0 1011 aa15.77■□□□□ 0.12
ARHGEF39-202ENST00000468876 KIF23Q02241 960 aaPredicted RBP15.76■□□□□ 0.11
ARHGEF39-202ENST00000468876 PKN2Q16513 984 aaKnown RBP15.76■□□□□ 0.11
ARHGEF39-202ENST00000468876 ZNF330Q9Y3S2 320 aaPredicted RBP15.76■□□□□ 0.11
ARHGEF39-202ENST00000468876 SETDB2Q96T68 719 aa15.75■□□□□ 0.11
ARHGEF39-202ENST00000468876 LGR6Q9HBX8 967 aa15.75■□□□□ 0.11
ARHGEF39-202ENST00000468876 UBR2Q8IWV8 1755 aa15.75■□□□□ 0.11
ARHGEF39-202ENST00000468876 DIAPH1O60610 1272 aaKnown RBP15.74■□□□□ 0.11
ARHGEF39-202ENST00000468876 NPR1P16066 1061 aa15.74■□□□□ 0.11
ARHGEF39-202ENST00000468876 MTHFSDQ2M296 383 aaKnown RBP15.74■□□□□ 0.11
ARHGEF39-202ENST00000468876 ADARB2Q9NS39 739 aaKnown RBP15.74■□□□□ 0.11
ARHGEF39-202ENST00000468876 TBC1D2BQ9UPU7 963 aa15.73■□□□□ 0.11
ARHGEF39-202ENST00000468876 ARFGEF2Q9Y6D5 1785 aa15.72■□□□□ 0.11
ARHGEF39-202ENST00000468876 RGMBQ6NW40 437 aa15.72■□□□□ 0.11
ARHGEF39-202ENST00000468876 SLC52A2Q9HAB3 445 aa15.72■□□□□ 0.11
ARHGEF39-202ENST00000468876 RNMTO43148 476 aaKnown RBP15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms