RNA–Protein interactions for RNA: ENST00000468723.1

GPNMB-207, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 808 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-207ENST00000468723 HSH2DQ96JZ2 352 aa7.77□□□□□ -1.17
GPNMB-207ENST00000468723 NDFIP2Q9NV92 336 aa7.77□□□□□ -1.17
GPNMB-207ENST00000468723 PRMT3O60678 531 aa7.76□□□□□ -1.17
GPNMB-207ENST00000468723 SLURP2P0DP57 97 aa7.76□□□□□ -1.17
GPNMB-207ENST00000468723 FGFR3P22607 806 aa7.76□□□□□ -1.17
GPNMB-207ENST00000468723 HIRAP54198 1017 aaPredicted RBP7.76□□□□□ -1.17
GPNMB-207ENST00000468723 TMEM164Q5U3C3 297 aa7.76□□□□□ -1.17
GPNMB-207ENST00000468723 POTEAQ6S8J7 498 aa7.76□□□□□ -1.17
GPNMB-207ENST00000468723 LYPD4Q6UWN0 246 aa7.76□□□□□ -1.17
GPNMB-207ENST00000468723 ATXN7L1Q9ULK2 861 aaPredicted RBP7.76□□□□□ -1.17
GPNMB-207ENST00000468723 ACIN1Q9UKV3 1341 aaKnown RBP7.76□□□□□ -1.17
GPNMB-207ENST00000468723 MAPTP10636 758 aaKnown RBP7.75□□□□□ -1.17
GPNMB-207ENST00000468723 WEE1P30291 646 aa7.75□□□□□ -1.17
GPNMB-207ENST00000468723 C1orf53Q5VUE5 145 aa7.75□□□□□ -1.17
GPNMB-207ENST00000468723 ZNF385CQ66K41 422 aaPredicted RBP7.75□□□□□ -1.17
GPNMB-207ENST00000468723 STAG2Q8N3U4 1231 aa7.75□□□□□ -1.17
GPNMB-207ENST00000468723 SVOPQ8N4V2 548 aa7.75□□□□□ -1.17
GPNMB-207ENST00000468723 ZNF280CQ8ND82 737 aa7.75□□□□□ -1.17
GPNMB-207ENST00000468723 STK17AQ9UEE5 414 aa7.75□□□□□ -1.17
GPNMB-207ENST00000468723 NSFL1CQ9UNZ2 370 aaKnown RBP7.75□□□□□ -1.17
GPNMB-207ENST00000468723 C2CD2LO14523 706 aa7.74□□□□□ -1.17
GPNMB-207ENST00000468723 BMP4P12644 408 aa7.74□□□□□ -1.17
GPNMB-207ENST00000468723 CD33P20138 364 aa7.74□□□□□ -1.17
GPNMB-207ENST00000468723 TNP2Q05952 138 aa7.74□□□□□ -1.17
GPNMB-207ENST00000468723 FAM69CQ0P6D2 419 aa7.74□□□□□ -1.17
GPNMB-207ENST00000468723 VTI1AQ96AJ9 217 aa7.74□□□□□ -1.17
GPNMB-207ENST00000468723 HCN2Q9UL51 889 aa7.74□□□□□ -1.17
GPNMB-207ENST00000468723 SWI5Q1ZZU3 235 aa7.73□□□□□ -1.17
GPNMB-207ENST00000468723 SUSD3Q96L08 255 aa7.73□□□□□ -1.17
GPNMB-207ENST00000468723 STRN4Q9NRL3 753 aa7.73□□□□□ -1.17
GPNMB-207ENST00000468723 FAM181BA6NEQ2 426 aa7.72□□□□□ -1.17
GPNMB-207ENST00000468723 FOXO3O43524 673 aa7.72□□□□□ -1.17
GPNMB-207ENST00000468723 CELA2BP08218 269 aaPredicted RBP7.72□□□□□ -1.17
GPNMB-207ENST00000468723 FKBP5Q13451 457 aaPredicted RBP7.72□□□□□ -1.17
GPNMB-207ENST00000468723 ACDQ96AP0 544 aa7.72□□□□□ -1.17
GPNMB-207ENST00000468723 FAM157BP0CG42 384 aa7.71□□□□□ -1.18
GPNMB-207ENST00000468723 MAP2K3P46734 347 aa7.71□□□□□ -1.18
GPNMB-207ENST00000468723 GRIN2CQ14957 1233 aa7.71□□□□□ -1.18
GPNMB-207ENST00000468723 SAMD5Q5TGI4 173 aa7.71□□□□□ -1.18
GPNMB-207ENST00000468723 CEP63Q96MT8 703 aa7.71□□□□□ -1.18
GPNMB-207ENST00000468723 KLK14Q9P0G3 267 aa7.71□□□□□ -1.18
GPNMB-207ENST00000468723 ANKIB1Q9P2G1 1089 aa7.71□□□□□ -1.18
GPNMB-207ENST00000468723 GPC6Q9Y625 555 aaPredicted RBP7.71□□□□□ -1.18
GPNMB-207ENST00000468723 SFSWAPQ12872 951 aaKnown RBP7.7□□□□□ -1.18
GPNMB-207ENST00000468723 OCLNQ16625 522 aa7.7□□□□□ -1.18
GPNMB-207ENST00000468723 RTN1Q16799 776 aa7.7□□□□□ -1.18
GPNMB-207ENST00000468723 MKNK1Q9BUB5 465 aa7.7□□□□□ -1.18
GPNMB-207ENST00000468723 OXCT2Q9BYC2 517 aaPredicted RBP7.7□□□□□ -1.18
GPNMB-207ENST00000468723 MARK1Q9P0L2 795 aa7.7□□□□□ -1.18
GPNMB-207ENST00000468723 SLAIN2Q9P270 581 aa7.7□□□□□ -1.18
GPNMB-207ENST00000468723 EFSO43281 561 aa7.69□□□□□ -1.18
GPNMB-207ENST00000468723 PPP1R15AO75807 674 aaPredicted RBP7.69□□□□□ -1.18
GPNMB-207ENST00000468723 MAP3K10Q02779 954 aa7.69□□□□□ -1.18
GPNMB-207ENST00000468723 QTRT2Q9H974 415 aaKnown RBP7.69□□□□□ -1.18
GPNMB-207ENST00000468723 ADAMTS8Q9UP79 889 aa7.69□□□□□ -1.18
GPNMB-207ENST00000468723 CARNS1A5YM72 827 aa7.68□□□□□ -1.18
GPNMB-207ENST00000468723 ARHGEF15O94989 841 aa7.68□□□□□ -1.18
GPNMB-207ENST00000468723 BCRP11274 1271 aa7.68□□□□□ -1.18
GPNMB-207ENST00000468723 DGKZQ13574 1117 aa7.68□□□□□ -1.18
GPNMB-207ENST00000468723 CAPN12Q6ZSI9 719 aa7.68□□□□□ -1.18
GPNMB-207ENST00000468723 CLP1Q92989 425 aaKnown RBP7.68□□□□□ -1.18
GPNMB-207ENST00000468723 BRD7Q9NPI1 651 aa7.68□□□□□ -1.18
GPNMB-207ENST00000468723 PRR12Q9ULL5 1215 aa7.68□□□□□ -1.18
GPNMB-207ENST00000468723 BCS1LQ9Y276 419 aa7.68□□□□□ -1.18
GPNMB-207ENST00000468723 TYRO3Q06418 890 aa7.67□□□□□ -1.18
GPNMB-207ENST00000468723 NAA30Q147X3 362 aaPredicted RBP7.67□□□□□ -1.18
GPNMB-207ENST00000468723 C1orf229Q6ZS94 237 aaPredicted RBP7.67□□□□□ -1.18
GPNMB-207ENST00000468723 BTLAQ7Z6A9 289 aa7.67□□□□□ -1.18
GPNMB-207ENST00000468723 CXXC1Q9P0U4 656 aaPredicted RBP7.67□□□□□ -1.18
GPNMB-207ENST00000468723 GGA1Q9UJY5 639 aa7.67□□□□□ -1.18
GPNMB-207ENST00000468723 LRFN2Q9ULH4 789 aa7.67□□□□□ -1.18
GPNMB-207ENST00000468723 DNMT3AQ9Y6K1 912 aaPredicted RBP7.67□□□□□ -1.18
GPNMB-207ENST00000468723 NEURL1BA8MQ27 555 aa7.66□□□□□ -1.18
GPNMB-207ENST00000468723 ATP2B4P23634 1241 aa7.66□□□□□ -1.18
GPNMB-207ENST00000468723 PCBP4P57723 403 aaKnown RBP7.66□□□□□ -1.18
GPNMB-207ENST00000468723 LAMC2Q13753 1193 aa7.66□□□□□ -1.18
GPNMB-207ENST00000468723 FAM182BQ5T319 152 aa7.66□□□□□ -1.18
GPNMB-207ENST00000468723 GALNT6Q8NCL4 622 aa7.66□□□□□ -1.18
GPNMB-207ENST00000468723 NEDD1Q8NHV4 660 aa7.66□□□□□ -1.18
GPNMB-207ENST00000468723 SAP130Q9H0E3 1048 aa7.66□□□□□ -1.18
GPNMB-207ENST00000468723 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.66□□□□□ -1.18
GPNMB-207ENST00000468723 TGFBR3LH3BV60 316 aa7.65□□□□□ -1.18
GPNMB-207ENST00000468723 OIP5O43482 229 aa7.65□□□□□ -1.18
GPNMB-207ENST00000468723 SCNN1AP37088 669 aa7.65□□□□□ -1.18
GPNMB-207ENST00000468723 HIF1AQ16665 826 aa7.65□□□□□ -1.18
GPNMB-207ENST00000468723 C11orf91Q3C1V1 193 aa7.65□□□□□ -1.18
GPNMB-207ENST00000468723 COX20Q5RI15 118 aa7.65□□□□□ -1.18
GPNMB-207ENST00000468723 RAB44Q7Z6P3 723 aaPredicted RBP7.65□□□□□ -1.18
GPNMB-207ENST00000468723 GOLGA6L1Q8N7Z2 621 aa7.65□□□□□ -1.18
GPNMB-207ENST00000468723 SLC30A3Q99726 388 aa7.65□□□□□ -1.18
GPNMB-207ENST00000468723 ENAMQ9NRM1 1142 aa7.65□□□□□ -1.18
GPNMB-207ENST00000468723 KLF15Q9UIH9 416 aa7.65□□□□□ -1.18
GPNMB-207ENST00000468723 KCNH4Q9UQ05 1017 aa7.65□□□□□ -1.18
GPNMB-207ENST00000468723 TMEM88BA6NKF7 163 aa7.64□□□□□ -1.19
GPNMB-207ENST00000468723 SHISA8B8ZZ34 492 aa7.64□□□□□ -1.19
GPNMB-207ENST00000468723 ARAFP10398 606 aa7.64□□□□□ -1.19
GPNMB-207ENST00000468723 MARSP56192 900 aaKnown RBP7.64□□□□□ -1.19
GPNMB-207ENST00000468723 EDARADDQ8WWZ3 215 aa7.64□□□□□ -1.19
GPNMB-207ENST00000468723 IFT43Q96FT9 208 aa7.64□□□□□ -1.19
GPNMB-207ENST00000468723 MYO19Q96H55 970 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms