RNA–Protein interactions for RNA: ENST00000468712.5

SKAP2-203, Transcript of src kinase associated phosphoprotein 2, humanhuman

TSL 2

Gene SKAP2, Length 955 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKAP2-203ENST00000468712 POLR3GLQ9BT43 218 aa13.43□□□□□ -0.26
SKAP2-203ENST00000468712 PSEN2P49810 448 aa13.42□□□□□ -0.26
SKAP2-203ENST00000468712 MTHFSP49914 203 aa13.42□□□□□ -0.26
SKAP2-203ENST00000468712 CABP4P57796 275 aa13.42□□□□□ -0.26
SKAP2-203ENST00000468712 C1orf141Q5JVX7 400 aa13.42□□□□□ -0.26
SKAP2-203ENST00000468712 ZNF530Q6P9A1 599 aaPredicted RBP13.42□□□□□ -0.26
SKAP2-203ENST00000468712 SLC4A9Q96Q91 983 aa13.42□□□□□ -0.26
SKAP2-203ENST00000468712 ADCY9O60503 1353 aa13.42□□□□□ -0.26
SKAP2-203ENST00000468712 SENP3-EIF4A1A0A087X0R7 540 aa13.41□□□□□ -0.26
SKAP2-203ENST00000468712 IL13P35225 146 aa13.41□□□□□ -0.26
SKAP2-203ENST00000468712 ARHGEF1Q92888 912 aaKnown RBP13.41□□□□□ -0.26
SKAP2-203ENST00000468712 KDM6AO15550 1401 aaPredicted RBP13.4□□□□□ -0.26
SKAP2-203ENST00000468712 MMP10P09238 476 aa13.4□□□□□ -0.26
SKAP2-203ENST00000468712 TMC2Q8TDI7 906 aa13.4□□□□□ -0.26
SKAP2-203ENST00000468712 MFRPQ9BY79 579 aa13.4□□□□□ -0.26
SKAP2-203ENST00000468712 KIF13BQ9NQT8 1826 aa13.4□□□□□ -0.26
SKAP2-203ENST00000468712 CICQ96RK0 1608 aaPredicted RBP13.39□□□□□ -0.27
SKAP2-203ENST00000468712 RFC4P35249 363 aa13.39□□□□□ -0.27
SKAP2-203ENST00000468712 AKAP4Q5JQC9 854 aa13.39□□□□□ -0.27
SKAP2-203ENST00000468712 AMER1Q5JTC6 1135 aaPredicted RBP13.39□□□□□ -0.27
SKAP2-203ENST00000468712 SULT6B1Q6IMI4 303 aa13.39□□□□□ -0.27
SKAP2-203ENST00000468712 NFATC2IPQ8NCF5 419 aa13.39□□□□□ -0.27
SKAP2-203ENST00000468712 CCER1Q8TC90 406 aaPredicted RBP13.39□□□□□ -0.27
SKAP2-203ENST00000468712 COL5A3P25940 1745 aaPredicted RBP13.39□□□□□ -0.27
SKAP2-203ENST00000468712 ATP10DQ9P241 1426 aa13.39□□□□□ -0.27
SKAP2-203ENST00000468712 GYS1P13807 737 aa13.38□□□□□ -0.27
SKAP2-203ENST00000468712 IFFO2Q5TF58 517 aa13.38□□□□□ -0.27
SKAP2-203ENST00000468712 SMIM5Q71RC9 77 aa13.38□□□□□ -0.27
SKAP2-203ENST00000468712 GPBP1L1Q9HC44 474 aaPredicted RBP13.38□□□□□ -0.27
SKAP2-203ENST00000468712 CCDC87Q9NVE4 849 aa13.38□□□□□ -0.27
SKAP2-203ENST00000468712 PER1O15534 1290 aaPredicted RBP13.37□□□□□ -0.27
SKAP2-203ENST00000468712 PARP3Q9Y6F1 533 aa13.37□□□□□ -0.27
SKAP2-203ENST00000468712 CRKLP46109 303 aaKnown RBP13.36□□□□□ -0.27
SKAP2-203ENST00000468712 AEBP1Q8IUX7 1158 aa13.36□□□□□ -0.27
SKAP2-203ENST00000468712 C10orf71Q711Q0 1435 aa13.36□□□□□ -0.27
SKAP2-203ENST00000468712 PXDNLA1KZ92 1463 aa13.36□□□□□ -0.27
SKAP2-203ENST00000468712 VSIG10Q8N0Z9 540 aa13.35□□□□□ -0.27
SKAP2-203ENST00000468712 SLC52A2Q9HAB3 445 aa13.35□□□□□ -0.27
SKAP2-203ENST00000468712 NPC1L1Q9UHC9 1359 aa13.34□□□□□ -0.27
SKAP2-203ENST00000468712 PTCD1O75127 700 aaKnown RBP13.34□□□□□ -0.27
SKAP2-203ENST00000468712 SCN11AQ9UI33 1791 aa13.34□□□□□ -0.27
SKAP2-203ENST00000468712 KIF7Q2M1P5 1343 aa13.34□□□□□ -0.27
SKAP2-203ENST00000468712 C4AP0C0L4 1744 aa13.33□□□□□ -0.27
SKAP2-203ENST00000468712 KIAA1551Q9HCM1 1747 aa13.33□□□□□ -0.27
SKAP2-203ENST00000468712 PTPN5P54829 565 aa13.33□□□□□ -0.28
SKAP2-203ENST00000468712 TAOK2Q9UL54 1235 aa13.33□□□□□ -0.28
SKAP2-203ENST00000468712 STK24Q9Y6E0 443 aa13.33□□□□□ -0.28
SKAP2-203ENST00000468712 USP42Q9H9J4 1324 aaKnown RBP13.33□□□□□ -0.28
SKAP2-203ENST00000468712 MYH14Q7Z406 1995 aaKnown RBP13.32□□□□□ -0.28
SKAP2-203ENST00000468712 MRC1P22897 1456 aa13.32□□□□□ -0.28
SKAP2-203ENST00000468712 A0A0G2JLW4 131 aa13.32□□□□□ -0.28
SKAP2-203ENST00000468712 RNMTO43148 476 aaKnown RBP13.32□□□□□ -0.28
SKAP2-203ENST00000468712 DIAPH1O60610 1272 aaKnown RBP13.32□□□□□ -0.28
SKAP2-203ENST00000468712 KCNA3P22001 575 aa13.32□□□□□ -0.28
SKAP2-203ENST00000468712 TM4SF1P30408 202 aa13.32□□□□□ -0.28
SKAP2-203ENST00000468712 INTS5Q6P9B9 1019 aaKnown RBP13.32□□□□□ -0.28
SKAP2-203ENST00000468712 HSPA6P17066 643 aa13.31□□□□□ -0.28
SKAP2-203ENST00000468712 PPP4R3BQ5MIZ7 849 aa13.31□□□□□ -0.28
SKAP2-203ENST00000468712 LGR6Q9HBX8 967 aa13.31□□□□□ -0.28
SKAP2-203ENST00000468712 PIM2Q9P1W9 311 aa13.31□□□□□ -0.28
SKAP2-203ENST00000468712 ADAMTS7Q9UKP4 1686 aa13.31□□□□□ -0.28
SKAP2-203ENST00000468712 TJP1Q07157 1748 aa13.3□□□□□ -0.28
SKAP2-203ENST00000468712 CYP19A1P11511 503 aaPredicted RBP13.3□□□□□ -0.28
SKAP2-203ENST00000468712 DPEP1P16444 411 aa13.3□□□□□ -0.28
SKAP2-203ENST00000468712 BCS1LQ9Y276 419 aa13.3□□□□□ -0.28
SKAP2-203ENST00000468712 ZPR1O75312 459 aa13.29□□□□□ -0.28
SKAP2-203ENST00000468712 PTCD2Q8WV60 388 aaKnown RBP13.29□□□□□ -0.28
SKAP2-203ENST00000468712 NARFQ9UHQ1 456 aa13.29□□□□□ -0.28
SKAP2-203ENST00000468712 SOS1Q07889 1333 aaPredicted RBP13.29□□□□□ -0.28
SKAP2-203ENST00000468712 BRCA1P38398 1863 aaKnown RBP13.29□□□□□ -0.28
SKAP2-203ENST00000468712 CEP350Q5VT06 3117 aa13.28□□□□□ -0.28
SKAP2-203ENST00000468712 N4BP2Q86UW6 1770 aaPredicted RBP13.28□□□□□ -0.28
SKAP2-203ENST00000468712 POLRMTO00411 1230 aaKnown RBP13.28□□□□□ -0.28
SKAP2-203ENST00000468712 FCHSD2O94868 740 aa13.28□□□□□ -0.28
SKAP2-203ENST00000468712 MTHFSDQ2M296 383 aaKnown RBP13.28□□□□□ -0.28
SKAP2-203ENST00000468712 ARHGAP27Q6ZUM4 889 aa13.28□□□□□ -0.28
SKAP2-203ENST00000468712 TEX13AQ9BXU3 409 aaPredicted RBP13.28□□□□□ -0.28
SKAP2-203ENST00000468712 ARFGEF1Q9Y6D6 1849 aa13.27□□□□□ -0.28
SKAP2-203ENST00000468712 TOMM70O94826 608 aa13.27□□□□□ -0.29
SKAP2-203ENST00000468712 DALRD3Q5D0E6 543 aaKnown RBP13.27□□□□□ -0.29
SKAP2-203ENST00000468712 DNAJC10Q8IXB1 793 aa13.27□□□□□ -0.29
SKAP2-203ENST00000468712 STARD3NLO95772 234 aa13.26□□□□□ -0.29
SKAP2-203ENST00000468712 HMOX1P09601 288 aa13.26□□□□□ -0.29
SKAP2-203ENST00000468712 DDR1Q08345 913 aa13.26□□□□□ -0.29
SKAP2-203ENST00000468712 USPL1Q5W0Q7 1092 aa13.26□□□□□ -0.29
SKAP2-203ENST00000468712 KCPQ6ZWJ8 1503 aa13.26□□□□□ -0.29
SKAP2-203ENST00000468712 GAS2L2Q8NHY3 880 aa13.26□□□□□ -0.29
SKAP2-203ENST00000468712 SRP68Q9UHB9 627 aaKnown RBP13.26□□□□□ -0.29
SKAP2-203ENST00000468712 PDZRN3Q9UPQ7 1066 aa13.26□□□□□ -0.29
SKAP2-203ENST00000468712 ZC3H4Q9UPT8 1303 aaKnown RBP13.25□□□□□ -0.29
SKAP2-203ENST00000468712 A0A087WZG4 1122 aa13.25□□□□□ -0.29
SKAP2-203ENST00000468712 ZNF526Q8TF50 670 aaPredicted RBP13.25□□□□□ -0.29
SKAP2-203ENST00000468712 WWC3Q9ULE0 1092 aa13.25□□□□□ -0.29
SKAP2-203ENST00000468712 COL15A1P39059 1388 aa13.24□□□□□ -0.29
SKAP2-203ENST00000468712 GNAT3A8MTJ3 354 aa13.24□□□□□ -0.29
SKAP2-203ENST00000468712 APLP1P51693 650 aa13.24□□□□□ -0.29
SKAP2-203ENST00000468712 EIF5P55010 431 aaKnown RBP13.24□□□□□ -0.29
SKAP2-203ENST00000468712 SLC39A6Q13433 755 aa13.24□□□□□ -0.29
SKAP2-203ENST00000468712 CC2D1BQ5T0F9 858 aaKnown RBP13.24□□□□□ -0.29
SKAP2-203ENST00000468712 TTC5Q8N0Z6 440 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms