RNA–Protein interactions for RNA: ENST00000468149.5

MSL3-210, Transcript of MSL complex subunit 3, humanhuman

TSL 2

Gene MSL3, Length 1,646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-210ENST00000468149 U2AF1Q01081 240 aaKnown RBP eCLIP9.32□□□□□ -0.92
MSL3-210ENST00000468149 AKAP4Q5JQC9 854 aa9.32□□□□□ -0.92
MSL3-210ENST00000468149 GLMNQ92990 594 aa9.32□□□□□ -0.92
MSL3-210ENST00000468149 CICQ96RK0 1608 aaPredicted RBP9.32□□□□□ -0.92
MSL3-210ENST00000468149 COL5A3P25940 1745 aaPredicted RBP9.32□□□□□ -0.92
MSL3-210ENST00000468149 MRC1P22897 1456 aa9.32□□□□□ -0.92
MSL3-210ENST00000468149 TXNRD1Q16881 649 aa9.31□□□□□ -0.92
MSL3-210ENST00000468149 SLC27A3Q5K4L6 730 aa9.31□□□□□ -0.92
MSL3-210ENST00000468149 MPRIPQ6WCQ1 1025 aa9.31□□□□□ -0.92
MSL3-210ENST00000468149 TSPYL2Q9H2G4 693 aaPredicted RBP9.31□□□□□ -0.92
MSL3-210ENST00000468149 GNPATO15228 680 aa9.31□□□□□ -0.92
MSL3-210ENST00000468149 HMGB2P26583 209 aaKnown RBP9.31□□□□□ -0.92
MSL3-210ENST00000468149 PRKAR2BP31323 418 aa9.31□□□□□ -0.92
MSL3-210ENST00000468149 MTHFSDQ2M296 383 aaKnown RBP9.31□□□□□ -0.92
MSL3-210ENST00000468149 NBPF14Q5TI25 921 aa9.31□□□□□ -0.92
MSL3-210ENST00000468149 WWC1Q8IX03 1113 aa9.31□□□□□ -0.92
MSL3-210ENST00000468149 GAS2L2Q8NHY3 880 aa9.31□□□□□ -0.92
MSL3-210ENST00000468149 SREK1Q8WXA9 508 aaKnown RBP9.31□□□□□ -0.92
MSL3-210ENST00000468149 TMOD3Q9NYL9 352 aa9.31□□□□□ -0.92
MSL3-210ENST00000468149 CASZ1Q86V15 1759 aa9.3□□□□□ -0.92
MSL3-210ENST00000468149 UBR3Q6ZT12 1888 aa9.3□□□□□ -0.92
MSL3-210ENST00000468149 CARNS1A5YM72 827 aa9.3□□□□□ -0.92
MSL3-210ENST00000468149 BANK1Q8NDB2 785 aa9.3□□□□□ -0.92
MSL3-210ENST00000468149 PIGBQ92521 554 aa9.3□□□□□ -0.92
MSL3-210ENST00000468149 SMARCC1Q92922 1105 aaPredicted RBP9.3□□□□□ -0.92
MSL3-210ENST00000468149 PSMD1Q99460 953 aa9.3□□□□□ -0.92
MSL3-210ENST00000468149 PNNQ9H307 717 aaKnown RBP9.3□□□□□ -0.92
MSL3-210ENST00000468149 SNRKQ9NRH2 765 aa9.3□□□□□ -0.92
MSL3-210ENST00000468149 PALLDQ8WX93 1383 aa9.29□□□□□ -0.92
MSL3-210ENST00000468149 C4BP0C0L5 1744 aa9.29□□□□□ -0.92
MSL3-210ENST00000468149 SPDYE16A6NNV3 312 aaPredicted RBP9.29□□□□□ -0.92
MSL3-210ENST00000468149 CC2D2BQ6DHV5 1058 aa9.29□□□□□ -0.92
MSL3-210ENST00000468149 PROCA1Q8NCQ7 364 aaPredicted RBP9.29□□□□□ -0.92
MSL3-210ENST00000468149 PHACTR3Q96KR7 559 aa9.29□□□□□ -0.92
MSL3-210ENST00000468149 MYH14Q7Z406 1995 aaKnown RBP9.28□□□□□ -0.92
MSL3-210ENST00000468149 LRP5O75197 1615 aa9.28□□□□□ -0.92
MSL3-210ENST00000468149 MAP3K5Q99683 1374 aa9.28□□□□□ -0.92
MSL3-210ENST00000468149 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.28□□□□□ -0.92
MSL3-210ENST00000468149 GNAT3A8MTJ3 354 aa9.28□□□□□ -0.92
MSL3-210ENST00000468149 NEFMP07197 916 aa9.28□□□□□ -0.92
MSL3-210ENST00000468149 COL24A1Q17RW2 1714 aa9.28□□□□□ -0.92
MSL3-210ENST00000468149 ANP32CO43423 234 aa9.27□□□□□ -0.92
MSL3-210ENST00000468149 CABP4P57796 275 aa9.27□□□□□ -0.92
MSL3-210ENST00000468149 ZNF592Q92610 1267 aa9.27□□□□□ -0.92
MSL3-210ENST00000468149 PLEKHF1Q96S99 279 aa9.27□□□□□ -0.92
MSL3-210ENST00000468149 LRRC4BQ9NT99 713 aa9.27□□□□□ -0.92
MSL3-210ENST00000468149 TJP1Q07157 1748 aa9.27□□□□□ -0.92
MSL3-210ENST00000468149 CEMIPQ8WUJ3 1361 aa9.27□□□□□ -0.93
MSL3-210ENST00000468149 RNMTO43148 476 aaKnown RBP9.27□□□□□ -0.93
MSL3-210ENST00000468149 TCF3P15923 654 aa9.27□□□□□ -0.93
MSL3-210ENST00000468149 PDIA6Q15084 440 aa9.27□□□□□ -0.93
MSL3-210ENST00000468149 NFATC2IPQ8NCF5 419 aa9.27□□□□□ -0.93
MSL3-210ENST00000468149 REPIN1Q9BWE0 567 aaKnown RBP9.27□□□□□ -0.93
MSL3-210ENST00000468149 VRTNQ9H8Y1 702 aa9.27□□□□□ -0.93
MSL3-210ENST00000468149 SLC52A2Q9HAB3 445 aa9.27□□□□□ -0.93
MSL3-210ENST00000468149 CCNL1Q9UK58 526 aaPredicted RBP9.27□□□□□ -0.93
MSL3-210ENST00000468149 KDM3BQ7LBC6 1761 aa9.27□□□□□ -0.93
MSL3-210ENST00000468149 HTATSF1O43719 755 aaKnown RBP9.26□□□□□ -0.93
MSL3-210ENST00000468149 SLC15A2Q16348 729 aa9.26□□□□□ -0.93
MSL3-210ENST00000468149 TSR1Q2NL82 804 aaKnown RBP9.26□□□□□ -0.93
MSL3-210ENST00000468149 LGR6Q9HBX8 967 aa9.26□□□□□ -0.93
MSL3-210ENST00000468149 GDPD2Q9HCC8 539 aa9.26□□□□□ -0.93
MSL3-210ENST00000468149 ATG3Q9NT62 314 aa9.26□□□□□ -0.93
MSL3-210ENST00000468149 ASAP1Q9ULH1 1129 aa9.26□□□□□ -0.93
MSL3-210ENST00000468149 LOC102724428A0A0B4J2F2 783 aa9.25□□□□□ -0.93
MSL3-210ENST00000468149 POM121CA8CG34 1229 aa9.25□□□□□ -0.93
MSL3-210ENST00000468149 PSEN1P49768 467 aa9.25□□□□□ -0.93
MSL3-210ENST00000468149 SIK1P57059 783 aa9.25□□□□□ -0.93
MSL3-210ENST00000468149 R3HDM1Q15032 1099 aaKnown RBP9.25□□□□□ -0.93
MSL3-210ENST00000468149 WDR43Q15061 677 aaKnown RBP eCLIP9.25□□□□□ -0.93
MSL3-210ENST00000468149 ANO8Q9HCE9 1232 aaPredicted RBP9.25□□□□□ -0.93
MSL3-210ENST00000468149 STK32BQ9NY57 414 aa9.25□□□□□ -0.93
MSL3-210ENST00000468149 BCCIPQ9P287 314 aaKnown RBP eCLIP9.25□□□□□ -0.93
MSL3-210ENST00000468149 GNEQ9Y223 722 aaKnown RBP9.25□□□□□ -0.93
MSL3-210ENST00000468149 MAPK8IP3Q9UPT6 1336 aa9.25□□□□□ -0.93
MSL3-210ENST00000468149 PSDA5PKW4 1024 aaPredicted RBP9.24□□□□□ -0.93
MSL3-210ENST00000468149 DPYSL4O14531 572 aa9.24□□□□□ -0.93
MSL3-210ENST00000468149 RFX1P22670 979 aa9.24□□□□□ -0.93
MSL3-210ENST00000468149 FECHP22830 423 aa9.24□□□□□ -0.93
MSL3-210ENST00000468149 HIC1Q14526 733 aa9.24□□□□□ -0.93
MSL3-210ENST00000468149 IL17REQ8NFR9 667 aa9.24□□□□□ -0.93
MSL3-210ENST00000468149 C4AP0C0L4 1744 aa9.24□□□□□ -0.93
MSL3-210ENST00000468149 KCPQ6ZWJ8 1503 aa9.24□□□□□ -0.93
MSL3-210ENST00000468149 KDM4AO75164 1064 aa9.23□□□□□ -0.93
MSL3-210ENST00000468149 CENPBP07199 599 aaPredicted RBP9.23□□□□□ -0.93
MSL3-210ENST00000468149 ERCC3P19447 782 aa9.23□□□□□ -0.93
MSL3-210ENST00000468149 TEFQ10587 303 aa9.23□□□□□ -0.93
MSL3-210ENST00000468149 EFCAB3Q8N7B9 438 aa9.23□□□□□ -0.93
MSL3-210ENST00000468149 RTF1Q92541 710 aaKnown RBP9.23□□□□□ -0.93
MSL3-210ENST00000468149 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.23□□□□□ -0.93
MSL3-210ENST00000468149 LAMB4A4D0S4 1761 aa9.23□□□□□ -0.93
MSL3-210ENST00000468149 ATP6V1AP38606 617 aa9.23□□□□□ -0.93
MSL3-210ENST00000468149 KCNQ4P56696 695 aa9.23□□□□□ -0.93
MSL3-210ENST00000468149 NFE2L2Q16236 605 aa9.23□□□□□ -0.93
MSL3-210ENST00000468149 ADAMTS8Q9UP79 889 aa9.23□□□□□ -0.93
MSL3-210ENST00000468149 ZNF827Q17R98 1081 aa9.22□□□□□ -0.93
MSL3-210ENST00000468149 RUNDC1Q96C34 613 aa9.22□□□□□ -0.93
MSL3-210ENST00000468149 POLR3EQ9NVU0 708 aa9.22□□□□□ -0.93
MSL3-210ENST00000468149 BRPF3Q9ULD4 1205 aa9.22□□□□□ -0.93
MSL3-210ENST00000468149 PCDHB8Q9UN66 801 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms