RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 PROSER3Q2NL68 480 aa15.06■□□□□ 0
CDHR3-205ENST00000468143 NBPF5PQ86XG9 351 aaPredicted RBP15.06■□□□□ 0
CDHR3-205ENST00000468143 CNBD1Q8NA66 436 aa15.06■□□□□ 0
CDHR3-205ENST00000468143 CFAP44Q96MT7 982 aa15.06■□□□□ 0
CDHR3-205ENST00000468143 KIF6Q6ZMV9 814 aa15.05■□□□□ -0
CDHR3-205ENST00000468143 ZNF622Q969S3 477 aaKnown RBP eCLIP15.05■□□□□ -0
CDHR3-205ENST00000468143 BRIP1Q9BX63 1249 aa15.05■□□□□ -0
CDHR3-205ENST00000468143 MBIPQ9NS73 344 aa15.05■□□□□ -0
CDHR3-205ENST00000468143 SCN7AQ01118 1682 aa15.05■□□□□ -0
CDHR3-205ENST00000468143 MAP3K15Q6ZN16 1313 aa15.04■□□□□ -0
CDHR3-205ENST00000468143 PDE6BP35913 854 aa15.04■□□□□ -0
CDHR3-205ENST00000468143 ST5P78524 1137 aa15.04■□□□□ -0
CDHR3-205ENST00000468143 AIMP1Q12904 312 aaKnown RBP15.04■□□□□ -0
CDHR3-205ENST00000468143 SALL2Q9Y467 1007 aaPredicted RBP15.04■□□□□ -0
CDHR3-205ENST00000468143 AFDNP55196 1824 aaKnown RBP15.03■□□□□ -0
CDHR3-205ENST00000468143 NRXN2Q9P2S2 1712 aa15.03■□□□□ -0
CDHR3-205ENST00000468143 ERBB4Q15303 1308 aa15.03■□□□□ -0
CDHR3-205ENST00000468143 ERVV-1B6SEH8 477 aa15.03■□□□□ -0
CDHR3-205ENST00000468143 ELL2O00472 640 aaPredicted RBP15.03■□□□□ -0
CDHR3-205ENST00000468143 ZNF853P0CG23 659 aa15.03■□□□□ -0
CDHR3-205ENST00000468143 GPTP24298 496 aa15.03■□□□□ -0
CDHR3-205ENST00000468143 TPTE2Q6XPS3 522 aa15.03■□□□□ -0
CDHR3-205ENST00000468143 LRP10Q7Z4F1 713 aa15.03■□□□□ -0
CDHR3-205ENST00000468143 TTLL6Q8N841 843 aa15.03■□□□□ -0
CDHR3-205ENST00000468143 ZNF526Q8TF50 670 aaPredicted RBP15.03■□□□□ -0
CDHR3-205ENST00000468143 ZNF219Q9P2Y4 722 aaPredicted RBP15.03■□□□□ -0
CDHR3-205ENST00000468143 LAMB4A4D0S4 1761 aa15.03■□□□□ -0
CDHR3-205ENST00000468143 UTRNP46939 3433 aa15.02■□□□□ -0
CDHR3-205ENST00000468143 GTF2E1P29083 439 aaPredicted RBP15.02■□□□□ -0
CDHR3-205ENST00000468143 GNAI1P63096 354 aa15.02■□□□□ -0
CDHR3-205ENST00000468143 DUSP27Q5VZP5 1158 aa15.02■□□□□ -0
CDHR3-205ENST00000468143 COPS6Q7L5N1 327 aa15.02■□□□□ -0
CDHR3-205ENST00000468143 FAM9BQ8IZU0 186 aa15.02■□□□□ -0
CDHR3-205ENST00000468143 IFT57Q9NWB7 429 aa15.02■□□□□ -0
CDHR3-205ENST00000468143 CHD4Q14839 1912 aa15.02□□□□□ -0.01
CDHR3-205ENST00000468143 RGL2O15211 777 aa15.01□□□□□ -0.01
CDHR3-205ENST00000468143 CALD1Q05682 793 aaKnown RBP15.01□□□□□ -0.01
CDHR3-205ENST00000468143 HDGFL1Q5TGJ6 251 aa15.01□□□□□ -0.01
CDHR3-205ENST00000468143 NUTM1Q86Y26 1132 aa15.01□□□□□ -0.01
CDHR3-205ENST00000468143 XAGE3Q8WTP9 111 aa15.01□□□□□ -0.01
CDHR3-205ENST00000468143 CHPF2Q9P2E5 772 aa15.01□□□□□ -0.01
CDHR3-205ENST00000468143 BCORQ6W2J9 1755 aa15.01□□□□□ -0.01
CDHR3-205ENST00000468143 ATP10DQ9P241 1426 aa15□□□□□ -0.01
CDHR3-205ENST00000468143 SUSD4Q5VX71 490 aa15□□□□□ -0.01
CDHR3-205ENST00000468143 GIGYF2Q6Y7W6 1299 aaKnown RBP15□□□□□ -0.01
CDHR3-205ENST00000468143 DDX21Q9NR30 783 aaKnown RBP eCLIP15□□□□□ -0.01
CDHR3-205ENST00000468143 UBN2Q6ZU65 1347 aa14.99□□□□□ -0.01
CDHR3-205ENST00000468143 C21orf2O43822 256 aa14.99□□□□□ -0.01
CDHR3-205ENST00000468143 SRGNP10124 158 aa14.99□□□□□ -0.01
CDHR3-205ENST00000468143 ERFEQ4G0M1 354 aa14.99□□□□□ -0.01
CDHR3-205ENST00000468143 C9orf131Q5VYM1 1079 aa14.99□□□□□ -0.01
CDHR3-205ENST00000468143 WWC1Q8IX03 1113 aa14.99□□□□□ -0.01
CDHR3-205ENST00000468143 ZNF34Q8IZ26 560 aa14.99□□□□□ -0.01
CDHR3-205ENST00000468143 C8orf58Q8NAV2 365 aa14.99□□□□□ -0.01
CDHR3-205ENST00000468143 RASSF7Q02833 373 aa14.98□□□□□ -0.01
CDHR3-205ENST00000468143 TSR2Q969E8 191 aaKnown RBP14.98□□□□□ -0.01
CDHR3-205ENST00000468143 ZNF428Q96B54 188 aa14.98□□□□□ -0.01
CDHR3-205ENST00000468143 MASTLQ96GX5 879 aa14.98□□□□□ -0.01
CDHR3-205ENST00000468143 PDZRN3Q9UPQ7 1066 aa14.98□□□□□ -0.01
CDHR3-205ENST00000468143 HOXB7P09629 217 aa14.97□□□□□ -0.01
CDHR3-205ENST00000468143 CCDC27Q2M243 656 aa14.97□□□□□ -0.01
CDHR3-205ENST00000468143 STYK1Q6J9G0 422 aa14.97□□□□□ -0.01
CDHR3-205ENST00000468143 NYXQ9GZU5 481 aa14.97□□□□□ -0.01
CDHR3-205ENST00000468143 GPBP1L1Q9HC44 474 aaPredicted RBP14.97□□□□□ -0.01
CDHR3-205ENST00000468143 RNF181Q9P0P0 153 aa14.97□□□□□ -0.01
CDHR3-205ENST00000468143 DBF4Q9UBU7 674 aaPredicted RBP14.97□□□□□ -0.01
CDHR3-205ENST00000468143 BRCA1P38398 1863 aaKnown RBP14.97□□□□□ -0.01
CDHR3-205ENST00000468143 ADCY9O60503 1353 aa14.97□□□□□ -0.01
CDHR3-205ENST00000468143 GOLGB1Q14789 3259 aaKnown RBP14.96□□□□□ -0.01
CDHR3-205ENST00000468143 ANKRD31Q8N7Z5 1873 aa14.96□□□□□ -0.01
CDHR3-205ENST00000468143 TSPYL6Q8N831 410 aa14.96□□□□□ -0.01
CDHR3-205ENST00000468143 CNKSR1Q969H4 720 aa14.96□□□□□ -0.01
CDHR3-205ENST00000468143 PRELPP51888 382 aa14.95□□□□□ -0.02
CDHR3-205ENST00000468143 PRPF40BQ6NWY9 871 aaKnown RBP14.95□□□□□ -0.02
CDHR3-205ENST00000468143 PHAXQ9H814 394 aaKnown RBP14.95□□□□□ -0.02
CDHR3-205ENST00000468143 ABCC12Q96J65 1359 aa14.95□□□□□ -0.02
CDHR3-205ENST00000468143 KLRG2A4D1S0 409 aaPredicted RBP14.94□□□□□ -0.02
CDHR3-205ENST00000468143 TCERG1O14776 1098 aaKnown RBP14.94□□□□□ -0.02
CDHR3-205ENST00000468143 NTSR2O95665 410 aa14.94□□□□□ -0.02
CDHR3-205ENST00000468143 NPR1P16066 1061 aa14.94□□□□□ -0.02
CDHR3-205ENST00000468143 TCIRG1Q13488 830 aa14.94□□□□□ -0.02
CDHR3-205ENST00000468143 PARP10Q53GL7 1025 aa14.94□□□□□ -0.02
CDHR3-205ENST00000468143 ANKRD13DQ6ZTN6 518 aa14.94□□□□□ -0.02
CDHR3-205ENST00000468143 PPP1R42Q7Z4L9 355 aa14.94□□□□□ -0.02
CDHR3-205ENST00000468143 UTP14AQ9BVJ6 771 aaKnown RBP14.94□□□□□ -0.02
CDHR3-205ENST00000468143 HYPKQ9NX55 129 aa14.94□□□□□ -0.02
CDHR3-205ENST00000468143 NFKBIEO00221 500 aa14.93□□□□□ -0.02
CDHR3-205ENST00000468143 HSP90AB3PQ58FF7 597 aa14.93□□□□□ -0.02
CDHR3-205ENST00000468143 SYNE4Q8N205 404 aa14.93□□□□□ -0.02
CDHR3-205ENST00000468143 PLBD2Q8NHP8 589 aa14.93□□□□□ -0.02
CDHR3-205ENST00000468143 COL11A2P13942 1736 aaPredicted RBP14.92□□□□□ -0.02
CDHR3-205ENST00000468143 ATP5J2-PTCD1G3V325 749 aa14.92□□□□□ -0.02
CDHR3-205ENST00000468143 OLFM4Q6UX06 510 aa14.92□□□□□ -0.02
CDHR3-205ENST00000468143 C3orf67Q6ZVT6 689 aa14.92□□□□□ -0.02
CDHR3-205ENST00000468143 NLRP10Q86W26 655 aa14.92□□□□□ -0.02
CDHR3-205ENST00000468143 ARFGEF1Q9Y6D6 1849 aa14.92□□□□□ -0.02
CDHR3-205ENST00000468143 DLEC1Q9Y238 1755 aa14.91□□□□□ -0.02
CDHR3-205ENST00000468143 LMNB1P20700 586 aa14.91□□□□□ -0.02
CDHR3-205ENST00000468143 C1QTNF8P60827 252 aa14.91□□□□□ -0.02
CDHR3-205ENST00000468143 CCDC30Q5VVM6 783 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms