RNA–Protein interactions for RNA: ENST00000467717.5

VARS2-204, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 863 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-204ENST00000467717 BCAR3O75815 825 aa21.8■■□□□ 1.08
VARS2-204ENST00000467717 CAMTA2O94983 1202 aa21.8■■□□□ 1.08
VARS2-204ENST00000467717 ANKRD13DQ6ZTN6 518 aa21.8■■□□□ 1.08
VARS2-204ENST00000467717 SRP68Q9UHB9 627 aaKnown RBP21.8■■□□□ 1.08
VARS2-204ENST00000467717 MAP3K15Q6ZN16 1313 aa21.8■■□□□ 1.08
VARS2-204ENST00000467717 FKBP5Q13451 457 aaPredicted RBP21.79■■□□□ 1.08
VARS2-204ENST00000467717 USPL1Q5W0Q7 1092 aa21.79■■□□□ 1.08
VARS2-204ENST00000467717 PLBD2Q8NHP8 589 aa21.79■■□□□ 1.08
VARS2-204ENST00000467717 ZBTB3Q9H5J0 574 aa21.79■■□□□ 1.08
VARS2-204ENST00000467717 KIF16BQ96L93 1317 aa21.79■■□□□ 1.08
VARS2-204ENST00000467717 SLC16A10Q8TF71 515 aa21.78■■□□□ 1.08
VARS2-204ENST00000467717 PDGFDQ9GZP0 370 aaPredicted RBP21.78■■□□□ 1.08
VARS2-204ENST00000467717 PPP1R1BQ9UD71 204 aaPredicted RBP21.78■■□□□ 1.08
VARS2-204ENST00000467717 PTPRCP08575 1304 aa21.78■■□□□ 1.08
VARS2-204ENST00000467717 GYS1P13807 737 aa21.77■■□□□ 1.08
VARS2-204ENST00000467717 CLEC4GQ6UXB4 293 aa21.77■■□□□ 1.08
VARS2-204ENST00000467717 KSR2Q6VAB6 950 aa21.77■■□□□ 1.08
VARS2-204ENST00000467717 RIC3Q7Z5B4 369 aa21.77■■□□□ 1.08
VARS2-204ENST00000467717 BCL2L12Q9HB09 334 aa21.77■■□□□ 1.08
VARS2-204ENST00000467717 NOB1Q9ULX3 412 aaKnown RBP21.77■■□□□ 1.08
VARS2-204ENST00000467717 ZNF652Q9Y2D9 606 aa21.77■■□□□ 1.08
VARS2-204ENST00000467717 PI4KAP2A4QPH2 592 aa21.76■■□□□ 1.07
VARS2-204ENST00000467717 HLFQ16534 295 aa21.76■■□□□ 1.07
VARS2-204ENST00000467717 UBR3Q6ZT12 1888 aa21.76■■□□□ 1.07
VARS2-204ENST00000467717 PI4KAP1Q8N8J0 262 aa21.76■■□□□ 1.07
VARS2-204ENST00000467717 IPO8O15397 1037 aaKnown RBP21.75■■□□□ 1.07
VARS2-204ENST00000467717 NLGN1Q8N2Q7 840 aa21.75■■□□□ 1.07
VARS2-204ENST00000467717 ARHGAP45Q92619 1136 aa21.75■■□□□ 1.07
VARS2-204ENST00000467717 FKBP8Q14318 412 aa21.74■■□□□ 1.07
VARS2-204ENST00000467717 HSP90AB3PQ58FF7 597 aa21.74■■□□□ 1.07
VARS2-204ENST00000467717 GIGYF2Q6Y7W6 1299 aaKnown RBP21.74■■□□□ 1.07
VARS2-204ENST00000467717 FRAT1Q92837 279 aaPredicted RBP21.74■■□□□ 1.07
VARS2-204ENST00000467717 SPON1Q9HCB6 807 aa21.74■■□□□ 1.07
VARS2-204ENST00000467717 MAP3K2Q9Y2U5 619 aa21.74■■□□□ 1.07
VARS2-204ENST00000467717 API5Q9BZZ5 524 aaKnown RBP21.73■■□□□ 1.07
VARS2-204ENST00000467717 ADCY9O60503 1353 aa21.73■■□□□ 1.07
VARS2-204ENST00000467717 ZKSCAN2Q63HK3 967 aa21.72■■□□□ 1.07
VARS2-204ENST00000467717 DNAAF4Q8WXU2 420 aa21.72■■□□□ 1.07
VARS2-204ENST00000467717 METTL22Q9BUU2 404 aaPredicted RBP21.72■■□□□ 1.07
VARS2-204ENST00000467717 MTFR1LQ9H019 292 aa21.72■■□□□ 1.07
VARS2-204ENST00000467717 F6X3S4 739 aa21.71■■□□□ 1.07
VARS2-204ENST00000467717 TCIRG1Q13488 830 aa21.71■■□□□ 1.07
VARS2-204ENST00000467717 ZBTB7AO95365 584 aa21.7■■□□□ 1.06
VARS2-204ENST00000467717 TBC1D9BQ66K14 1250 aa21.7■■□□□ 1.06
VARS2-204ENST00000467717 MSL1Q68DK7 614 aa21.7■■□□□ 1.06
VARS2-204ENST00000467717 ATF7IPQ6VMQ6 1270 aa21.7■■□□□ 1.06
VARS2-204ENST00000467717 NEXNQ0ZGT2 675 aa21.69■■□□□ 1.06
VARS2-204ENST00000467717 MYD88Q99836 296 aa21.69■■□□□ 1.06
VARS2-204ENST00000467717 NIP7Q9Y221 180 aaKnown RBP eCLIP21.69■■□□□ 1.06
VARS2-204ENST00000467717 ATP10DQ9P241 1426 aa21.69■■□□□ 1.06
VARS2-204ENST00000467717 QSER1Q2KHR3 1735 aa21.69■■□□□ 1.06
VARS2-204ENST00000467717 TRIM27P14373 513 aa21.68■■□□□ 1.06
VARS2-204ENST00000467717 TM4SF1P30408 202 aa21.68■■□□□ 1.06
VARS2-204ENST00000467717 NFIXQ14938 502 aa21.68■■□□□ 1.06
VARS2-204ENST00000467717 BICDL1Q6ZP65 573 aa21.68■■□□□ 1.06
VARS2-204ENST00000467717 ZNF34Q8IZ26 560 aa21.68■■□□□ 1.06
VARS2-204ENST00000467717 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.68■■□□□ 1.06
VARS2-204ENST00000467717 SETDB2Q96T68 719 aa21.68■■□□□ 1.06
VARS2-204ENST00000467717 TUBGCP6Q96RT7 1819 aa21.68■■□□□ 1.06
VARS2-204ENST00000467717 CHD4Q14839 1912 aa21.68■■□□□ 1.06
VARS2-204ENST00000467717 CENPBP07199 599 aaPredicted RBP21.67■■□□□ 1.06
VARS2-204ENST00000467717 GPTP24298 496 aa21.67■■□□□ 1.06
VARS2-204ENST00000467717 TRIM28Q13263 835 aaKnown RBP21.67■■□□□ 1.06
VARS2-204ENST00000467717 PARP10Q53GL7 1025 aa21.67■■□□□ 1.06
VARS2-204ENST00000467717 SLC4A10Q6U841 1118 aa21.67■■□□□ 1.06
VARS2-204ENST00000467717 ISCA1Q9BUE6 129 aa21.67■■□□□ 1.06
VARS2-204ENST00000467717 CASZ1Q86V15 1759 aa21.66■■□□□ 1.06
VARS2-204ENST00000467717 ATP5J2-PTCD1G3V325 749 aa21.66■■□□□ 1.06
VARS2-204ENST00000467717 MMP10P09238 476 aa21.66■■□□□ 1.06
VARS2-204ENST00000467717 LINS1Q8NG48 757 aa21.66■■□□□ 1.06
VARS2-204ENST00000467717 ATF5Q9Y2D1 282 aaPredicted RBP21.66■■□□□ 1.06
VARS2-204ENST00000467717 C4AP0C0L4 1744 aa21.66■■□□□ 1.06
VARS2-204ENST00000467717 BEND3Q5T5X7 828 aa21.65■■□□□ 1.06
VARS2-204ENST00000467717 ZNF784Q8NCA9 323 aaPredicted RBP21.65■■□□□ 1.06
VARS2-204ENST00000467717 UBN2Q6ZU65 1347 aa21.64■■□□□ 1.05
VARS2-204ENST00000467717 IGKV5-2P06315 115 aa21.64■■□□□ 1.05
VARS2-204ENST00000467717 MS4A1P11836 297 aa21.64■■□□□ 1.05
VARS2-204ENST00000467717 NLRP10Q86W26 655 aa21.64■■□□□ 1.05
VARS2-204ENST00000467717 CCDC191Q8NCU4 936 aa21.64■■□□□ 1.05
VARS2-204ENST00000467717 CACNA1FO60840 1977 aa21.64■■□□□ 1.05
VARS2-204ENST00000467717 CARMIL3Q8ND23 1372 aa21.63■■□□□ 1.05
VARS2-204ENST00000467717 SCN7AQ01118 1682 aa21.63■■□□□ 1.05
VARS2-204ENST00000467717 ABCC4O15439 1325 aa21.63■■□□□ 1.05
VARS2-204ENST00000467717 NEURL1BA8MQ27 555 aa21.63■■□□□ 1.05
VARS2-204ENST00000467717 POLRMTO00411 1230 aaKnown RBP21.63■■□□□ 1.05
VARS2-204ENST00000467717 PLIN1O60240 522 aa21.63■■□□□ 1.05
VARS2-204ENST00000467717 POLD1P28340 1107 aa21.63■■□□□ 1.05
VARS2-204ENST00000467717 CCT4P50991 539 aaKnown RBP21.63■■□□□ 1.05
VARS2-204ENST00000467717 DDR1Q08345 913 aa21.63■■□□□ 1.05
VARS2-204ENST00000467717 FTSJ3Q8IY81 847 aaKnown RBP21.63■■□□□ 1.05
VARS2-204ENST00000467717 CLUAP1Q96AJ1 413 aa21.63■■□□□ 1.05
VARS2-204ENST00000467717 SRCIN1Q9C0H9 1055 aa21.63■■□□□ 1.05
VARS2-204ENST00000467717 PARP3Q9Y6F1 533 aa21.63■■□□□ 1.05
VARS2-204ENST00000467717 RRP1P56182 461 aaKnown RBP21.62■■□□□ 1.05
VARS2-204ENST00000467717 CWF19L2Q2TBE0 894 aaKnown RBP21.62■■□□□ 1.05
VARS2-204ENST00000467717 IFFO2Q5TF58 517 aa21.62■■□□□ 1.05
VARS2-204ENST00000467717 DZIP1LQ8IYY4 767 aaKnown RBP21.62■■□□□ 1.05
VARS2-204ENST00000467717 CWC25Q9NXE8 425 aaPredicted RBP21.62■■□□□ 1.05
VARS2-204ENST00000467717 TNNQ9UQP3 1299 aa21.62■■□□□ 1.05
VARS2-204ENST00000467717 ALDH1L1O75891 902 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms