RNA–Protein interactions for RNA: ENST00000467681.5

SSBP1-206, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 630 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-206ENST00000467681 TBC1D9BQ66K14 1250 aa17.58■□□□□ 0.4
SSBP1-206ENST00000467681 COPS6Q7L5N1 327 aa17.58■□□□□ 0.4
SSBP1-206ENST00000467681 HYPKQ9NX55 129 aa17.58■□□□□ 0.4
SSBP1-206ENST00000467681 MAP3K15Q6ZN16 1313 aa17.57■□□□□ 0.4
SSBP1-206ENST00000467681 E9PSI1 815 aa17.57■□□□□ 0.4
SSBP1-206ENST00000467681 SLFN5Q08AF3 891 aa17.57■□□□□ 0.4
SSBP1-206ENST00000467681 HLFQ16534 295 aa17.57■□□□□ 0.4
SSBP1-206ENST00000467681 KIF6Q6ZMV9 814 aa17.57■□□□□ 0.4
SSBP1-206ENST00000467681 BICDL1Q6ZP65 573 aa17.57■□□□□ 0.4
SSBP1-206ENST00000467681 XAGE3Q8WTP9 111 aa17.57■□□□□ 0.4
SSBP1-206ENST00000467681 ZNF652Q9Y2D9 606 aa17.57■□□□□ 0.4
SSBP1-206ENST00000467681 SRCAPQ6ZRS2 3230 aa17.57■□□□□ 0.4
SSBP1-206ENST00000467681 SERPINB2P05120 415 aa17.56■□□□□ 0.4
SSBP1-206ENST00000467681 KLHL34Q8N239 644 aa17.56■□□□□ 0.4
SSBP1-206ENST00000467681 SETDB2Q96T68 719 aa17.56■□□□□ 0.4
SSBP1-206ENST00000467681 AIMP1Q12904 312 aaKnown RBP17.55■□□□□ 0.4
SSBP1-206ENST00000467681 TRMT2AQ8IZ69 625 aaKnown RBP17.55■□□□□ 0.4
SSBP1-206ENST00000467681 CDCA7LQ96GN5 454 aa17.55■□□□□ 0.4
SSBP1-206ENST00000467681 ZBTB3Q9H5J0 574 aa17.54■□□□□ 0.4
SSBP1-206ENST00000467681 C4AP0C0L4 1744 aa17.53■□□□□ 0.4
SSBP1-206ENST00000467681 GIGYF2Q6Y7W6 1299 aaKnown RBP17.53■□□□□ 0.4
SSBP1-206ENST00000467681 ANKRD13DQ6ZTN6 518 aa17.53■□□□□ 0.4
SSBP1-206ENST00000467681 NIP7Q9Y221 180 aaKnown RBP eCLIP17.53■□□□□ 0.4
SSBP1-206ENST00000467681 TCERG1O14776 1098 aaKnown RBP17.52■□□□□ 0.4
SSBP1-206ENST00000467681 HNRNPUQ00839 825 aaKnown RBP eCLIP17.52■□□□□ 0.4
SSBP1-206ENST00000467681 NLGN2Q8NFZ4 835 aa17.52■□□□□ 0.4
SSBP1-206ENST00000467681 PLBD2Q8NHP8 589 aa17.52■□□□□ 0.4
SSBP1-206ENST00000467681 STK31Q9BXU1 1019 aa17.52■□□□□ 0.4
SSBP1-206ENST00000467681 LAMB4A4D0S4 1761 aa17.51■□□□□ 0.39
SSBP1-206ENST00000467681 SLC4A2P04920 1241 aa17.51■□□□□ 0.39
SSBP1-206ENST00000467681 TGFB2P61812 414 aa17.51■□□□□ 0.39
SSBP1-206ENST00000467681 ZNF34Q8IZ26 560 aa17.51■□□□□ 0.39
SSBP1-206ENST00000467681 PHAXQ9H814 394 aaKnown RBP17.51■□□□□ 0.39
SSBP1-206ENST00000467681 TCIRG1Q13488 830 aa17.5■□□□□ 0.39
SSBP1-206ENST00000467681 TPTE2Q6XPS3 522 aa17.5■□□□□ 0.39
SSBP1-206ENST00000467681 HSP90AB3PQ58FF7 597 aa17.49■□□□□ 0.39
SSBP1-206ENST00000467681 PRR5LQ6MZQ0 368 aa17.49■□□□□ 0.39
SSBP1-206ENST00000467681 NBPF5PQ86XG9 351 aaPredicted RBP17.49■□□□□ 0.39
SSBP1-206ENST00000467681 CARMIL3Q8ND23 1372 aa17.49■□□□□ 0.39
SSBP1-206ENST00000467681 GPTP24298 496 aa17.48■□□□□ 0.39
SSBP1-206ENST00000467681 A0A0G2JLW4 131 aa17.47■□□□□ 0.39
SSBP1-206ENST00000467681 DPEP1P16444 411 aa17.47■□□□□ 0.39
SSBP1-206ENST00000467681 PARP10Q53GL7 1025 aa17.47■□□□□ 0.39
SSBP1-206ENST00000467681 SUSD4Q5VX71 490 aa17.47■□□□□ 0.39
SSBP1-206ENST00000467681 G2E3Q7L622 706 aa17.47■□□□□ 0.39
SSBP1-206ENST00000467681 CNBD1Q8NA66 436 aa17.47■□□□□ 0.39
SSBP1-206ENST00000467681 BRIP1Q9BX63 1249 aa17.47■□□□□ 0.39
SSBP1-206ENST00000467681 DCAF8L1A6NGE4 600 aa17.46■□□□□ 0.39
SSBP1-206ENST00000467681 DDX58O95786 925 aaKnown RBP17.46■□□□□ 0.39
SSBP1-206ENST00000467681 TRIM28Q13263 835 aaKnown RBP17.46■□□□□ 0.39
SSBP1-206ENST00000467681 KSR2Q6VAB6 950 aa17.46■□□□□ 0.39
SSBP1-206ENST00000467681 RIC3Q7Z5B4 369 aa17.46■□□□□ 0.39
SSBP1-206ENST00000467681 CCDC24Q8N4L8 307 aa17.46■□□□□ 0.39
SSBP1-206ENST00000467681 C10orf71Q711Q0 1435 aa17.46■□□□□ 0.39
SSBP1-206ENST00000467681 ATP10DQ9P241 1426 aa17.46■□□□□ 0.39
SSBP1-206ENST00000467681 FAM177BA6PVY3 158 aa17.45■□□□□ 0.38
SSBP1-206ENST00000467681 KCNA3P22001 575 aa17.45■□□□□ 0.38
SSBP1-206ENST00000467681 ISCA1Q9BUE6 129 aa17.45■□□□□ 0.38
SSBP1-206ENST00000467681 NYXQ9GZU5 481 aa17.45■□□□□ 0.38
SSBP1-206ENST00000467681 NPHP1O15259 732 aa17.44■□□□□ 0.38
SSBP1-206ENST00000467681 GTF2E1P29083 439 aaPredicted RBP17.44■□□□□ 0.38
SSBP1-206ENST00000467681 ST5P78524 1137 aa17.44■□□□□ 0.38
SSBP1-206ENST00000467681 PPP1R42Q7Z4L9 355 aa17.44■□□□□ 0.38
SSBP1-206ENST00000467681 NLRP10Q86W26 655 aa17.44■□□□□ 0.38
SSBP1-206ENST00000467681 ZNF428Q96B54 188 aa17.44■□□□□ 0.38
SSBP1-206ENST00000467681 UTP14AQ9BVJ6 771 aaKnown RBP17.44■□□□□ 0.38
SSBP1-206ENST00000467681 PDZRN3Q9UPQ7 1066 aa17.44■□□□□ 0.38
SSBP1-206ENST00000467681 UBN2Q6ZU65 1347 aa17.44■□□□□ 0.38
SSBP1-206ENST00000467681 PI4KAP2A4QPH2 592 aa17.43■□□□□ 0.38
SSBP1-206ENST00000467681 CT47B1P0C2W7 299 aaPredicted RBP17.43■□□□□ 0.38
SSBP1-206ENST00000467681 CHRNA5P30532 468 aa17.43■□□□□ 0.38
SSBP1-206ENST00000467681 PDE6BP35913 854 aa17.43■□□□□ 0.38
SSBP1-206ENST00000467681 FLIIQ13045 1269 aa17.43■□□□□ 0.38
SSBP1-206ENST00000467681 GPR162Q16538 588 aa17.43■□□□□ 0.38
SSBP1-206ENST00000467681 PI4KAP1Q8N8J0 262 aa17.43■□□□□ 0.38
SSBP1-206ENST00000467681 METTL22Q9BUU2 404 aaPredicted RBP17.43■□□□□ 0.38
SSBP1-206ENST00000467681 KLRG2A4D1S0 409 aaPredicted RBP17.42■□□□□ 0.38
SSBP1-206ENST00000467681 ATP5J2-PTCD1G3V325 749 aa17.42■□□□□ 0.38
SSBP1-206ENST00000467681 H0YIN7 160 aa17.42■□□□□ 0.38
SSBP1-206ENST00000467681 SLC10A5Q5PT55 438 aa17.42■□□□□ 0.38
SSBP1-206ENST00000467681 C2CD5Q86YS7 1000 aa17.42■□□□□ 0.38
SSBP1-206ENST00000467681 PIM2Q9P1W9 311 aa17.42■□□□□ 0.38
SSBP1-206ENST00000467681 MAP3K2Q9Y2U5 619 aa17.42■□□□□ 0.38
SSBP1-206ENST00000467681 ZBED9Q6R2W3 1325 aa17.42■□□□□ 0.38
SSBP1-206ENST00000467681 SCN7AQ01118 1682 aa17.42■□□□□ 0.38
SSBP1-206ENST00000467681 NTSR2O95665 410 aa17.41■□□□□ 0.38
SSBP1-206ENST00000467681 ERFEQ4G0M1 354 aa17.41■□□□□ 0.38
SSBP1-206ENST00000467681 NUTM1Q86Y26 1132 aa17.41■□□□□ 0.38
SSBP1-206ENST00000467681 MRPL50Q8N5N7 158 aaKnown RBP17.41■□□□□ 0.38
SSBP1-206ENST00000467681 SSH1Q8WYL5 1049 aa17.41■□□□□ 0.38
SSBP1-206ENST00000467681 NUP98P52948 1817 aa17.41■□□□□ 0.38
SSBP1-206ENST00000467681 BCORQ6W2J9 1755 aa17.4■□□□□ 0.38
SSBP1-206ENST00000467681 PXDNLA1KZ92 1463 aa17.4■□□□□ 0.38
SSBP1-206ENST00000467681 YBX3P16989 372 aaKnown RBP eCLIP17.4■□□□□ 0.38
SSBP1-206ENST00000467681 PELP1Q8IZL8 1130 aaKnown RBP17.4■□□□□ 0.38
SSBP1-206ENST00000467681 MYD88Q99836 296 aa17.4■□□□□ 0.38
SSBP1-206ENST00000467681 IBTKQ9P2D0 1353 aaPredicted RBP17.4■□□□□ 0.38
SSBP1-206ENST00000467681 NRXN2Q9P2S2 1712 aa17.39■□□□□ 0.37
SSBP1-206ENST00000467681 GRIN3BO60391 1043 aa17.39■□□□□ 0.37
SSBP1-206ENST00000467681 FKBP5Q13451 457 aaPredicted RBP17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms