RNA–Protein interactions for RNA: ENST00000467213.5

CHD1L-205, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best)

Gene CHD1L, Length 2,782 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-205ENST00000467213 GJB2P29033 226 aa18.54■□□□□ 0.56
CHD1L-205ENST00000467213 HOXB7P09629 217 aa18.53■□□□□ 0.56
CHD1L-205ENST00000467213 KRT85P78386 507 aa18.53■□□□□ 0.56
CHD1L-205ENST00000467213 DDX19AQ9NUU7 478 aaKnown RBP18.53■□□□□ 0.56
CHD1L-205ENST00000467213 MED1Q15648 1581 aaPredicted RBP18.53■□□□□ 0.56
CHD1L-205ENST00000467213 FAM193AP78312 1265 aa18.53■□□□□ 0.56
CHD1L-205ENST00000467213 GABPB1Q06547 395 aaPredicted RBP18.53■□□□□ 0.56
CHD1L-205ENST00000467213 MTX1Q13505 466 aa18.53■□□□□ 0.56
CHD1L-205ENST00000467213 TDRD7Q8NHU6 1098 aaKnown RBP18.53■□□□□ 0.56
CHD1L-205ENST00000467213 CEP170BQ9Y4F5 1589 aaPredicted RBP18.53■□□□□ 0.56
CHD1L-205ENST00000467213 DNM1Q05193 864 aaKnown RBP18.53■□□□□ 0.56
CHD1L-205ENST00000467213 PLA2G4DQ86XP0 818 aa18.53■□□□□ 0.56
CHD1L-205ENST00000467213 SCAND2PQ9GZW5 306 aaPredicted RBP18.53■□□□□ 0.56
CHD1L-205ENST00000467213 CYP46A1Q9Y6A2 500 aa18.53■□□□□ 0.56
CHD1L-205ENST00000467213 GIGYF1O75420 1035 aaPredicted RBP18.52■□□□□ 0.56
CHD1L-205ENST00000467213 NUP62CLQ9H1M0 184 aa18.52■□□□□ 0.56
CHD1L-205ENST00000467213 PDRG1Q9NUG6 133 aa18.52■□□□□ 0.56
CHD1L-205ENST00000467213 MRVI1Q9Y6F6 885 aa18.52■□□□□ 0.56
CHD1L-205ENST00000467213 ACEP12821 1306 aa18.52■□□□□ 0.56
CHD1L-205ENST00000467213 C17orf53Q8N3J3 647 aaPredicted RBP18.52■□□□□ 0.55
CHD1L-205ENST00000467213 CGNQ9P2M7 1197 aaKnown RBP18.52■□□□□ 0.55
CHD1L-205ENST00000467213 NEMFO60524 1076 aa18.51■□□□□ 0.55
CHD1L-205ENST00000467213 CBX1P83916 185 aa18.51■□□□□ 0.55
CHD1L-205ENST00000467213 TXNDC2Q86VQ3 553 aa18.51■□□□□ 0.55
CHD1L-205ENST00000467213 KDM3BQ7LBC6 1761 aa18.51■□□□□ 0.55
CHD1L-205ENST00000467213 NWD1Q149M9 1564 aa18.51■□□□□ 0.55
CHD1L-205ENST00000467213 NPHP3Q7Z494 1330 aa18.51■□□□□ 0.55
CHD1L-205ENST00000467213 HIP1O00291 1037 aa18.51■□□□□ 0.55
CHD1L-205ENST00000467213 CASTP20810 708 aaKnown RBP18.51■□□□□ 0.55
CHD1L-205ENST00000467213 TYRO3Q06418 890 aa18.51■□□□□ 0.55
CHD1L-205ENST00000467213 PPP1R42Q7Z4L9 355 aa18.51■□□□□ 0.55
CHD1L-205ENST00000467213 KCND1Q9NSA2 647 aa18.51■□□□□ 0.55
CHD1L-205ENST00000467213 GNAT3A8MTJ3 354 aa18.5■□□□□ 0.55
CHD1L-205ENST00000467213 NECTIN1Q15223 517 aa18.5■□□□□ 0.55
CHD1L-205ENST00000467213 ANKRD1Q15327 319 aa18.5■□□□□ 0.55
CHD1L-205ENST00000467213 FOXD4L6Q3SYB3 417 aaPredicted RBP18.5■□□□□ 0.55
CHD1L-205ENST00000467213 FOXD4L3Q6VB84 417 aaPredicted RBP18.5■□□□□ 0.55
CHD1L-205ENST00000467213 PRDM10Q9NQV6 1147 aa18.5■□□□□ 0.55
CHD1L-205ENST00000467213 MIS18AQ9NYP9 233 aa18.5■□□□□ 0.55
CHD1L-205ENST00000467213 SURF6O75683 361 aaKnown RBP18.49■□□□□ 0.55
CHD1L-205ENST00000467213 TSC1Q92574 1164 aa18.49■□□□□ 0.55
CHD1L-205ENST00000467213 NCBP1Q09161 790 aaKnown RBP18.49■□□□□ 0.55
CHD1L-205ENST00000467213 SARM1Q6SZW1 724 aa18.49■□□□□ 0.55
CHD1L-205ENST00000467213 PLPPR3Q6T4P5 718 aa18.49■□□□□ 0.55
CHD1L-205ENST00000467213 NUTM1Q86Y26 1132 aa18.49■□□□□ 0.55
CHD1L-205ENST00000467213 NCKAP5LQ9HCH0 1330 aa18.49■□□□□ 0.55
CHD1L-205ENST00000467213 JARID2Q92833 1246 aaPredicted RBP18.48■□□□□ 0.55
CHD1L-205ENST00000467213 IL1RAPL2Q9NP60 686 aa18.48■□□□□ 0.55
CHD1L-205ENST00000467213 TSPOAP1O95153 1857 aa18.48■□□□□ 0.55
CHD1L-205ENST00000467213 LARGE1O95461 756 aa18.48■□□□□ 0.55
CHD1L-205ENST00000467213 PSMA5P28066 241 aa18.48■□□□□ 0.55
CHD1L-205ENST00000467213 ST3GAL1Q11201 340 aa18.48■□□□□ 0.55
CHD1L-205ENST00000467213 TAF7Q15545 349 aaPredicted RBP18.48■□□□□ 0.55
CHD1L-205ENST00000467213 TTC6Q86TZ1 520 aa18.48■□□□□ 0.55
CHD1L-205ENST00000467213 CTNNA3Q9UI47 895 aa18.48■□□□□ 0.55
CHD1L-205ENST00000467213 HDAC5Q9UQL6 1122 aa18.48■□□□□ 0.55
CHD1L-205ENST00000467213 JCADQ9P266 1359 aa18.48■□□□□ 0.55
CHD1L-205ENST00000467213 FOXO3O43524 673 aa18.47■□□□□ 0.55
CHD1L-205ENST00000467213 ZNF75DP51815 510 aa18.47■□□□□ 0.55
CHD1L-205ENST00000467213 CCDC83Q8IWF9 413 aa18.47■□□□□ 0.55
CHD1L-205ENST00000467213 CLSTN2Q9H4D0 955 aa18.47■□□□□ 0.55
CHD1L-205ENST00000467213 ROBO2Q9HCK4 1378 aa18.47■□□□□ 0.55
CHD1L-205ENST00000467213 UBR1Q8IWV7 1749 aa18.47■□□□□ 0.55
CHD1L-205ENST00000467213 ZKSCAN1P17029 563 aaPredicted RBP18.47■□□□□ 0.55
CHD1L-205ENST00000467213 TSGA10IPQ3SY00 556 aa18.47■□□□□ 0.55
CHD1L-205ENST00000467213 ERC1Q8IUD2 1116 aa18.47■□□□□ 0.55
CHD1L-205ENST00000467213 MORC2Q9Y6X9 1032 aaPredicted RBP18.47■□□□□ 0.55
CHD1L-205ENST00000467213 CREBRFQ8IUR6 639 aa18.47■□□□□ 0.55
CHD1L-205ENST00000467213 EVI5LQ96CN4 794 aa18.47■□□□□ 0.55
CHD1L-205ENST00000467213 GPATCH3Q96I76 525 aa18.47■□□□□ 0.55
CHD1L-205ENST00000467213 DDX41Q9UJV9 622 aaKnown RBP18.47■□□□□ 0.55
CHD1L-205ENST00000467213 PIK3C2AO00443 1686 aa18.46■□□□□ 0.55
CHD1L-205ENST00000467213 EYA1Q99502 592 aa18.46■□□□□ 0.55
CHD1L-205ENST00000467213 PTGS1P23219 599 aa18.46■□□□□ 0.55
CHD1L-205ENST00000467213 RBM6P78332 1123 aaKnown RBP18.46■□□□□ 0.55
CHD1L-205ENST00000467213 ME3Q16798 604 aa18.46■□□□□ 0.55
CHD1L-205ENST00000467213 ZSCAN25Q6NSZ9 544 aa18.46■□□□□ 0.55
CHD1L-205ENST00000467213 JAKMIP1Q96N16 626 aaKnown RBP18.46■□□□□ 0.55
CHD1L-205ENST00000467213 CBX8Q9HC52 389 aa18.46■□□□□ 0.55
CHD1L-205ENST00000467213 ZHX1Q9UKY1 873 aaPredicted RBP18.46■□□□□ 0.55
CHD1L-205ENST00000467213 ADAMTS13Q76LX8 1427 aa18.45■□□□□ 0.54
CHD1L-205ENST00000467213 MARF1Q9Y4F3 1742 aaKnown RBP18.45■□□□□ 0.54
CHD1L-205ENST00000467213 MAP4K1Q92918 833 aa18.45■□□□□ 0.54
CHD1L-205ENST00000467213 CEMIPQ8WUJ3 1361 aa18.45■□□□□ 0.54
CHD1L-205ENST00000467213 MYH15Q9Y2K3 1946 aa18.45■□□□□ 0.54
CHD1L-205ENST00000467213 LARP1BQ659C4 914 aaKnown RBP18.45■□□□□ 0.54
CHD1L-205ENST00000467213 TNMDQ9H2S6 317 aa18.45■□□□□ 0.54
CHD1L-205ENST00000467213 SENP3Q9H4L4 574 aaPredicted RBP18.45■□□□□ 0.54
CHD1L-205ENST00000467213 ECHDC1Q9NTX5 307 aa18.45■□□□□ 0.54
CHD1L-205ENST00000467213 DIP2BQ9P265 1576 aa18.44■□□□□ 0.54
CHD1L-205ENST00000467213 CWC27Q6UX04 472 aaKnown RBP18.44■□□□□ 0.54
CHD1L-205ENST00000467213 SRGAP3O43295 1099 aa18.44■□□□□ 0.54
CHD1L-205ENST00000467213 SLFNL1Q499Z3 407 aa18.44■□□□□ 0.54
CHD1L-205ENST00000467213 CCDC186Q7Z3E2 898 aa18.44■□□□□ 0.54
CHD1L-205ENST00000467213 MPNDQ8N594 471 aa18.44■□□□□ 0.54
CHD1L-205ENST00000467213 MRFAP1L1Q96HT8 127 aa18.44■□□□□ 0.54
CHD1L-205ENST00000467213 SLIT1O75093 1534 aa18.43■□□□□ 0.54
CHD1L-205ENST00000467213 BEND3Q5T5X7 828 aa18.43■□□□□ 0.54
CHD1L-205ENST00000467213 FAM53CQ9NYF3 392 aa18.43■□□□□ 0.54
CHD1L-205ENST00000467213 U2AF2P26368 475 aaKnown RBP eCLIP18.43■□□□□ 0.543e-7■■■□□ 14.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms