RNA–Protein interactions for RNA: ENST00000467152.1

PDE6B-206, Transcript of phosphodiesterase 6B, humanhuman

TSL 1 (best)

Gene PDE6B, Length 545 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-206ENST00000467152 DICER1Q9UPY3 1922 aaKnown RBP24.27■■□□□ 1.48
PDE6B-206ENST00000467152 A0A087WZG4 1122 aa24.26■■□□□ 1.47
PDE6B-206ENST00000467152 NBPF26B4DH59 902 aa24.26■■□□□ 1.47
PDE6B-206ENST00000467152 ZNF853P0CG23 659 aa24.26■■□□□ 1.47
PDE6B-206ENST00000467152 PIP4K2AP48426 406 aaPredicted RBP24.26■■□□□ 1.47
PDE6B-206ENST00000467152 FSTL1Q12841 308 aa24.26■■□□□ 1.47
PDE6B-206ENST00000467152 NBPF10Q6P3W6 841 aaKnown RBP24.26■■□□□ 1.47
PDE6B-206ENST00000467152 NBPF15Q8N660 670 aa24.26■■□□□ 1.47
PDE6B-206ENST00000467152 CFAP44Q96MT7 982 aa24.26■■□□□ 1.47
PDE6B-206ENST00000467152 COL11A2P13942 1736 aaPredicted RBP24.25■■□□□ 1.47
PDE6B-206ENST00000467152 NCBP3Q53F19 620 aaKnown RBP24.25■■□□□ 1.47
PDE6B-206ENST00000467152 ARFGEF2Q9Y6D5 1785 aa24.24■■□□□ 1.47
PDE6B-206ENST00000467152 SERPINB2P05120 415 aa24.24■■□□□ 1.47
PDE6B-206ENST00000467152 CCDC27Q2M243 656 aa24.24■■□□□ 1.47
PDE6B-206ENST00000467152 BCL2L12Q9HB09 334 aa24.24■■□□□ 1.47
PDE6B-206ENST00000467152 TBC1D2BQ9UPU7 963 aa24.23■■□□□ 1.47
PDE6B-206ENST00000467152 FER1L6Q2WGJ9 1857 aa24.23■■□□□ 1.47
PDE6B-206ENST00000467152 CACNA1SQ13698 1873 aa24.22■■□□□ 1.47
PDE6B-206ENST00000467152 CALD1Q05682 793 aaKnown RBP24.22■■□□□ 1.47
PDE6B-206ENST00000467152 DIEXFQ68CQ4 756 aaKnown RBP24.22■■□□□ 1.47
PDE6B-206ENST00000467152 WWC1Q8IX03 1113 aa24.22■■□□□ 1.47
PDE6B-206ENST00000467152 IFT57Q9NWB7 429 aa24.22■■□□□ 1.47
PDE6B-206ENST00000467152 ZNF330Q9Y3S2 320 aaPredicted RBP24.22■■□□□ 1.47
PDE6B-206ENST00000467152 CCER2I3L3R5 266 aa24.21■■□□□ 1.47
PDE6B-206ENST00000467152 DNAJC5GQ8N7S2 189 aa24.21■■□□□ 1.47
PDE6B-206ENST00000467152 TTLL6Q8N841 843 aa24.21■■□□□ 1.47
PDE6B-206ENST00000467152 MBIPQ9NS73 344 aa24.21■■□□□ 1.47
PDE6B-206ENST00000467152 CARMIL3Q8ND23 1372 aa24.2■■□□□ 1.46
PDE6B-206ENST00000467152 LMNB1P20700 586 aa24.2■■□□□ 1.46
PDE6B-206ENST00000467152 GNAI1P63096 354 aa24.2■■□□□ 1.46
PDE6B-206ENST00000467152 KRT24Q2M2I5 525 aa24.2■■□□□ 1.46
PDE6B-206ENST00000467152 PDZRN3Q9UPQ7 1066 aa24.2■■□□□ 1.46
PDE6B-206ENST00000467152 H0YIN7 160 aa24.19■■□□□ 1.46
PDE6B-206ENST00000467152 NPM2Q86SE8 214 aaKnown RBP24.19■■□□□ 1.46
PDE6B-206ENST00000467152 C2CD5Q86YS7 1000 aa24.19■■□□□ 1.46
PDE6B-206ENST00000467152 CAMTA2O94983 1202 aa24.18■■□□□ 1.46
PDE6B-206ENST00000467152 RASSF7Q02833 373 aa24.18■■□□□ 1.46
PDE6B-206ENST00000467152 DZIP3Q86Y13 1208 aaKnown RBP24.18■■□□□ 1.46
PDE6B-206ENST00000467152 EIF2S2P20042 333 aaKnown RBP24.17■■□□□ 1.46
PDE6B-206ENST00000467152 RRAGCQ9HB90 399 aa24.17■■□□□ 1.46
PDE6B-206ENST00000467152 SALL2Q9Y467 1007 aaPredicted RBP24.17■■□□□ 1.46
PDE6B-206ENST00000467152 SMC1BQ8NDV3 1235 aa24.16■■□□□ 1.46
PDE6B-206ENST00000467152 PDIA6Q15084 440 aa24.15■■□□□ 1.46
PDE6B-206ENST00000467152 ERBB4Q15303 1308 aa24.14■■□□□ 1.46
PDE6B-206ENST00000467152 PDE6BP35913 854 aa24.14■■□□□ 1.45
PDE6B-206ENST00000467152 BICDL1Q6ZP65 573 aa24.14■■□□□ 1.45
PDE6B-206ENST00000467152 MIER1Q8N108 512 aa24.14■■□□□ 1.45
PDE6B-206ENST00000467152 BRIP1Q9BX63 1249 aa24.14■■□□□ 1.45
PDE6B-206ENST00000467152 LAMB4A4D0S4 1761 aa24.14■■□□□ 1.45
PDE6B-206ENST00000467152 GLTPD2A6NH11 291 aa24.13■■□□□ 1.45
PDE6B-206ENST00000467152 MYL6BP14649 208 aa24.13■■□□□ 1.45
PDE6B-206ENST00000467152 DUSP27Q5VZP5 1158 aa24.13■■□□□ 1.45
PDE6B-206ENST00000467152 TBC1D9BQ66K14 1250 aa24.13■■□□□ 1.45
PDE6B-206ENST00000467152 NGEFQ8N5V2 710 aa24.13■■□□□ 1.45
PDE6B-206ENST00000467152 KLRG1Q96E93 195 aa24.13■■□□□ 1.45
PDE6B-206ENST00000467152 IL16Q14005 1332 aa24.12■■□□□ 1.45
PDE6B-206ENST00000467152 HOXB7P09629 217 aa24.12■■□□□ 1.45
PDE6B-206ENST00000467152 LRP10Q7Z4F1 713 aa24.12■■□□□ 1.45
PDE6B-206ENST00000467152 WDR63Q8IWG1 891 aa24.12■■□□□ 1.45
PDE6B-206ENST00000467152 NECTIN2Q92692 538 aa24.12■■□□□ 1.45
PDE6B-206ENST00000467152 NFKBIEO00221 500 aa24.11■■□□□ 1.45
PDE6B-206ENST00000467152 PROSER3Q2NL68 480 aa24.11■■□□□ 1.45
PDE6B-206ENST00000467152 CLEC4GQ6UXB4 293 aa24.11■■□□□ 1.45
PDE6B-206ENST00000467152 SLX4Q8IY92 1834 aa24.1■■□□□ 1.45
PDE6B-206ENST00000467152 VEGFAP15692 232 aaPredicted RBP24.1■■□□□ 1.45
PDE6B-206ENST00000467152 PRR5LQ6MZQ0 368 aa24.1■■□□□ 1.45
PDE6B-206ENST00000467152 TTLL7Q6ZT98 887 aa24.1■■□□□ 1.45
PDE6B-206ENST00000467152 JMYQ8N9B5 988 aa24.1■■□□□ 1.45
PDE6B-206ENST00000467152 C8orf58Q8NAV2 365 aa24.1■■□□□ 1.45
PDE6B-206ENST00000467152 RGL2O15211 777 aa24.09■■□□□ 1.45
PDE6B-206ENST00000467152 ANXA1P04083 346 aa24.09■■□□□ 1.45
PDE6B-206ENST00000467152 PRELPP51888 382 aa24.09■■□□□ 1.45
PDE6B-206ENST00000467152 TSR2Q969E8 191 aaKnown RBP24.09■■□□□ 1.45
PDE6B-206ENST00000467152 ELL2O00472 640 aaPredicted RBP24.08■■□□□ 1.45
PDE6B-206ENST00000467152 HLFQ16534 295 aa24.08■■□□□ 1.45
PDE6B-206ENST00000467152 CNBD1Q8NA66 436 aa24.08■■□□□ 1.45
PDE6B-206ENST00000467152 ZNF622Q969S3 477 aaKnown RBP eCLIP24.08■■□□□ 1.45
PDE6B-206ENST00000467152 SETDB2Q96T68 719 aa24.08■■□□□ 1.45
PDE6B-206ENST00000467152 DDX21Q9NR30 783 aaKnown RBP eCLIP24.08■■□□□ 1.45
PDE6B-206ENST00000467152 LTBP3Q9NS15 1303 aa24.08■■□□□ 1.44
PDE6B-206ENST00000467152 ERVV-1B6SEH8 477 aa24.07■■□□□ 1.44
PDE6B-206ENST00000467152 HDGFL1Q5TGJ6 251 aa24.07■■□□□ 1.44
PDE6B-206ENST00000467152 ST5P78524 1137 aa24.06■■□□□ 1.44
PDE6B-206ENST00000467152 MAP3K15Q6ZN16 1313 aa24.06■■□□□ 1.44
PDE6B-206ENST00000467152 PCNTO95613 3336 aa24.05■■□□□ 1.44
PDE6B-206ENST00000467152 NPHP1O15259 732 aa24.05■■□□□ 1.44
PDE6B-206ENST00000467152 HTRA3P83110 453 aa24.05■■□□□ 1.44
PDE6B-206ENST00000467152 DPY19L2Q6NUT2 758 aa24.05■■□□□ 1.44
PDE6B-206ENST00000467152 TSPYL6Q8N831 410 aa24.05■■□□□ 1.44
PDE6B-206ENST00000467152 CHPF2Q9P2E5 772 aa24.05■■□□□ 1.44
PDE6B-206ENST00000467152 ZNF652Q9Y2D9 606 aa24.05■■□□□ 1.44
PDE6B-206ENST00000467152 SOGA3Q5TF21 947 aa24.04■■□□□ 1.44
PDE6B-206ENST00000467152 STYK1Q6J9G0 422 aa24.04■■□□□ 1.44
PDE6B-206ENST00000467152 CNKSR1Q969H4 720 aa24.04■■□□□ 1.44
PDE6B-206ENST00000467152 SPINK5Q9NQ38 1064 aaPredicted RBP24.04■■□□□ 1.44
PDE6B-206ENST00000467152 SCN4AP35499 1836 aa24.03■■□□□ 1.44
PDE6B-206ENST00000467152 C21orf2O43822 256 aa24.03■■□□□ 1.44
PDE6B-206ENST00000467152 KIF6Q6ZMV9 814 aa24.03■■□□□ 1.44
PDE6B-206ENST00000467152 COPS6Q7L5N1 327 aa24.03■■□□□ 1.44
PDE6B-206ENST00000467152 ZNF521Q96K83 1311 aa24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms