RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 MDFIQ99750 246 aa10.03□□□□□ -0.8
XRN1-206ENST00000467077 PARP3Q9Y6F1 533 aa10.02□□□□□ -0.81
XRN1-206ENST00000467077 USP3Q9Y6I4 520 aa10.02□□□□□ -0.81
XRN1-206ENST00000467077 TMEM229AB2RXF0 380 aa10.01□□□□□ -0.81
XRN1-206ENST00000467077 ADH7P40394 386 aa10.01□□□□□ -0.81
XRN1-206ENST00000467077 LRRC69Q6ZNQ3 347 aa10.01□□□□□ -0.81
XRN1-206ENST00000467077 MICALL1Q8N3F8 863 aa10.01□□□□□ -0.81
XRN1-206ENST00000467077 BACH1O14867 736 aa10□□□□□ -0.81
XRN1-206ENST00000467077 NID1P14543 1247 aa10□□□□□ -0.81
XRN1-206ENST00000467077 TXLNAP40222 546 aa10□□□□□ -0.81
XRN1-206ENST00000467077 TRAPPC3LQ5T215 181 aa10□□□□□ -0.81
XRN1-206ENST00000467077 C8orf86Q6ZUL3 223 aa10□□□□□ -0.81
XRN1-206ENST00000467077 COL9A3Q14050 684 aaPredicted RBP9.99□□□□□ -0.81
XRN1-206ENST00000467077 STARD13Q9Y3M8 1113 aa9.99□□□□□ -0.81
XRN1-206ENST00000467077 NRG1Q02297 640 aaPredicted RBP9.98□□□□□ -0.81
XRN1-206ENST00000467077 MBTPS1Q14703 1052 aa9.98□□□□□ -0.81
XRN1-206ENST00000467077 TXNRD3Q86VQ6 643 aa9.98□□□□□ -0.81
XRN1-206ENST00000467077 GPC6Q9Y625 555 aaPredicted RBP9.98□□□□□ -0.81
XRN1-206ENST00000467077 LILRB5O75023 590 aa9.97□□□□□ -0.81
XRN1-206ENST00000467077 ELNP15502 786 aa9.97□□□□□ -0.81
XRN1-206ENST00000467077 RAC1P63000 192 aa9.97□□□□□ -0.81
XRN1-206ENST00000467077 VAC14Q08AM6 782 aa9.97□□□□□ -0.81
XRN1-206ENST00000467077 SPEM2Q0P670 501 aa9.97□□□□□ -0.81
XRN1-206ENST00000467077 ADGRE1Q14246 886 aa9.97□□□□□ -0.81
XRN1-206ENST00000467077 ZNF232Q9UNY5 417 aa9.97□□□□□ -0.81
XRN1-206ENST00000467077 L3MBTL2Q969R5 705 aa9.96□□□□□ -0.82
XRN1-206ENST00000467077 SLC30A3Q99726 388 aa9.96□□□□□ -0.82
XRN1-206ENST00000467077 SFSWAPQ12872 951 aaKnown RBP9.95□□□□□ -0.82
XRN1-206ENST00000467077 SCHIP1Q9P0W5 487 aaPredicted RBP9.95□□□□□ -0.82
XRN1-206ENST00000467077 HYAL3O43820 417 aaPredicted RBP9.94□□□□□ -0.82
XRN1-206ENST00000467077 PSME1Q06323 249 aa9.94□□□□□ -0.82
XRN1-206ENST00000467077 SEMA3FQ13275 785 aa9.94□□□□□ -0.82
XRN1-206ENST00000467077 IRF5Q13568 498 aa9.94□□□□□ -0.82
XRN1-206ENST00000467077 RAB44Q7Z6P3 723 aaPredicted RBP9.94□□□□□ -0.82
XRN1-206ENST00000467077 RHPN1Q8TCX5 695 aa9.94□□□□□ -0.82
XRN1-206ENST00000467077 TP53INP1Q96A56 240 aa9.94□□□□□ -0.82
XRN1-206ENST00000467077 A0A0A0MRY4 1105 aa9.93□□□□□ -0.82
XRN1-206ENST00000467077 EML1O00423 815 aa9.93□□□□□ -0.82
XRN1-206ENST00000467077 NOS2P35228 1153 aa9.93□□□□□ -0.82
XRN1-206ENST00000467077 TEAD4Q15561 434 aa9.93□□□□□ -0.82
XRN1-206ENST00000467077 EML3Q32P44 896 aa9.93□□□□□ -0.82
XRN1-206ENST00000467077 ZDHHC1Q8WTX9 485 aa9.93□□□□□ -0.82
XRN1-206ENST00000467077 GOLGA2P5Q9HBQ8 144 aa9.93□□□□□ -0.82
XRN1-206ENST00000467077 USP21Q9UK80 565 aa9.93□□□□□ -0.82
XRN1-206ENST00000467077 SELPP16109 830 aa9.92□□□□□ -0.82
XRN1-206ENST00000467077 TBC1D8BQ0IIM8 1120 aa9.92□□□□□ -0.82
XRN1-206ENST00000467077 WASHC4Q2M389 1173 aa9.91□□□□□ -0.82
XRN1-206ENST00000467077 C20orf204Q6ZNR8 217 aa9.91□□□□□ -0.82
XRN1-206ENST00000467077 LENG1Q96BZ8 264 aaPredicted RBP9.91□□□□□ -0.82
XRN1-206ENST00000467077 BRD7Q9NPI1 651 aa9.91□□□□□ -0.82
XRN1-206ENST00000467077 SOX11P35716 441 aa9.9□□□□□ -0.82
XRN1-206ENST00000467077 CEP63Q96MT8 703 aa9.9□□□□□ -0.82
XRN1-206ENST00000467077 JPH1Q9HDC5 661 aaPredicted RBP9.9□□□□□ -0.82
XRN1-206ENST00000467077 NOD1Q9Y239 953 aa9.9□□□□□ -0.82
XRN1-206ENST00000467077 PCDHGA11Q9Y5H2 935 aa9.9□□□□□ -0.82
XRN1-206ENST00000467077 SLC9A9Q8IVB4 645 aa9.89□□□□□ -0.83
XRN1-206ENST00000467077 UBE2OQ9C0C9 1292 aaKnown RBP9.89□□□□□ -0.83
XRN1-206ENST00000467077 ZNF358Q9NW07 568 aa9.89□□□□□ -0.83
XRN1-206ENST00000467077 ANKIB1Q9P2G1 1089 aa9.89□□□□□ -0.83
XRN1-206ENST00000467077 CHMP3Q9Y3E7 222 aa9.89□□□□□ -0.83
XRN1-206ENST00000467077 SERTM1A2A2V5 107 aa9.88□□□□□ -0.83
XRN1-206ENST00000467077 GTF2IP78347 998 aa9.88□□□□□ -0.83
XRN1-206ENST00000467077 SHISA2Q6UWI4 295 aa9.88□□□□□ -0.83
XRN1-206ENST00000467077 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.88□□□□□ -0.83
XRN1-206ENST00000467077 BHMTQ93088 406 aa9.88□□□□□ -0.83
XRN1-206ENST00000467077 KCNH4Q9UQ05 1017 aa9.88□□□□□ -0.83
XRN1-206ENST00000467077 ABL2P42684 1182 aa9.87□□□□□ -0.83
XRN1-206ENST00000467077 KRTAP19-1Q8IUB9 90 aa9.86□□□□□ -0.83
XRN1-206ENST00000467077 TBCELQ5QJ74 424 aa9.85□□□□□ -0.83
XRN1-206ENST00000467077 MCTP1Q6DN14 999 aa9.85□□□□□ -0.83
XRN1-206ENST00000467077 IGFLR1Q9H665 355 aa9.85□□□□□ -0.83
XRN1-206ENST00000467077 SLC6A14Q9UN76 642 aa9.85□□□□□ -0.83
XRN1-206ENST00000467077 KCNQ4P56696 695 aa9.84□□□□□ -0.83
XRN1-206ENST00000467077 NUDT8Q8WV74 236 aa9.84□□□□□ -0.83
XRN1-206ENST00000467077 HSH2DQ96JZ2 352 aa9.84□□□□□ -0.83
XRN1-206ENST00000467077 KRTAP9-9Q9BYP9 154 aa9.84□□□□□ -0.83
XRN1-206ENST00000467077 KRTAP9-4Q9BYQ2 154 aa9.84□□□□□ -0.83
XRN1-206ENST00000467077 LZTS3O60299 673 aaPredicted RBP9.83□□□□□ -0.84
XRN1-206ENST00000467077 SKIP12755 728 aa9.83□□□□□ -0.84
XRN1-206ENST00000467077 EPHA4P54764 986 aa9.83□□□□□ -0.84
XRN1-206ENST00000467077 TYRO3Q06418 890 aa9.83□□□□□ -0.84
XRN1-206ENST00000467077 FMR1NBQ8N0W7 255 aaPredicted RBP9.83□□□□□ -0.84
XRN1-206ENST00000467077 GDPD2Q9HCC8 539 aa9.83□□□□□ -0.84
XRN1-206ENST00000467077 RNF112Q9ULX5 631 aa9.83□□□□□ -0.84
XRN1-206ENST00000467077 SFI1A8K8P3 1242 aa9.82□□□□□ -0.84
XRN1-206ENST00000467077 PIK3CDO00329 1044 aa9.82□□□□□ -0.84
XRN1-206ENST00000467077 PSMA6P60900 246 aaKnown RBP9.82□□□□□ -0.84
XRN1-206ENST00000467077 C1orf53Q5VUE5 145 aa9.82□□□□□ -0.84
XRN1-206ENST00000467077 TNS4Q8IZW8 715 aa9.82□□□□□ -0.84
XRN1-206ENST00000467077 PAX4O43316 350 aa9.81□□□□□ -0.84
XRN1-206ENST00000467077 SH3PXD2AQ5TCZ1 1133 aa9.81□□□□□ -0.84
XRN1-206ENST00000467077 PSAPL1Q6NUJ1 521 aa9.81□□□□□ -0.84
XRN1-206ENST00000467077 SSBP4Q9BWG4 385 aaPredicted RBP9.81□□□□□ -0.84
XRN1-206ENST00000467077 DMRTC2Q8IXT2 367 aaPredicted RBP9.8□□□□□ -0.84
XRN1-206ENST00000467077 C7orf43Q8WVR3 580 aa9.8□□□□□ -0.84
XRN1-206ENST00000467077 RGS9O75916 674 aaPredicted RBP9.79□□□□□ -0.84
XRN1-206ENST00000467077 AFF1P51825 1210 aaKnown RBP9.79□□□□□ -0.84
XRN1-206ENST00000467077 NCOA4Q13772 614 aa9.79□□□□□ -0.84
XRN1-206ENST00000467077 BCANQ96GW7 911 aa9.79□□□□□ -0.84
XRN1-206ENST00000467077 PNMA5Q96PV4 448 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms