RNA–Protein interactions for RNA: ENST00000466861.1

SUMO3-205, Transcript of small ubiquitin-like modifier 3, humanhuman

TSL 2

Gene SUMO3, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3-205ENST00000466861 C10orf71Q711Q0 1435 aa30.1■■■□□ 2.41
SUMO3-205ENST00000466861 TBC1D9BQ66K14 1250 aa30.09■■■□□ 2.41
SUMO3-205ENST00000466861 CHPF2Q9P2E5 772 aa30.09■■■□□ 2.41
SUMO3-205ENST00000466861 CACNA1FO60840 1977 aa30.08■■■□□ 2.41
SUMO3-205ENST00000466861 NUP98P52948 1817 aa30.08■■■□□ 2.41
SUMO3-205ENST00000466861 AFDNP55196 1824 aaKnown RBP30.08■■■□□ 2.41
SUMO3-205ENST00000466861 CARMIL3Q8ND23 1372 aa30.08■■■□□ 2.41
SUMO3-205ENST00000466861 TWISTNBQ3B726 338 aaPredicted RBP30.08■■■□□ 2.41
SUMO3-205ENST00000466861 NECTIN2Q92692 538 aa30.08■■■□□ 2.41
SUMO3-205ENST00000466861 SETDB2Q96T68 719 aa30.08■■■□□ 2.41
SUMO3-205ENST00000466861 E9PSI1 815 aa30.07■■■□□ 2.4
SUMO3-205ENST00000466861 ELL2O00472 640 aaPredicted RBP30.07■■■□□ 2.4
SUMO3-205ENST00000466861 PROSER3Q2NL68 480 aa30.07■■■□□ 2.4
SUMO3-205ENST00000466861 TTLL7Q6ZT98 887 aa30.07■■■□□ 2.4
SUMO3-205ENST00000466861 SERPINB2P05120 415 aa30.06■■■□□ 2.4
SUMO3-205ENST00000466861 TGFB2P61812 414 aa30.06■■■□□ 2.4
SUMO3-205ENST00000466861 KLHL34Q8N239 644 aa30.06■■■□□ 2.4
SUMO3-205ENST00000466861 TSPYL6Q8N831 410 aa30.06■■■□□ 2.4
SUMO3-205ENST00000466861 SPINK5Q9NQ38 1064 aaPredicted RBP30.06■■■□□ 2.4
SUMO3-205ENST00000466861 GIGYF2Q6Y7W6 1299 aaKnown RBP30.05■■■□□ 2.4
SUMO3-205ENST00000466861 ATP10DQ9P241 1426 aa30.05■■■□□ 2.4
SUMO3-205ENST00000466861 COPS6Q7L5N1 327 aa30.04■■■□□ 2.4
SUMO3-205ENST00000466861 ANXA1P04083 346 aa30.03■■■□□ 2.4
SUMO3-205ENST00000466861 DCAF8L1A6NGE4 600 aa30.02■■■□□ 2.4
SUMO3-205ENST00000466861 HLFQ16534 295 aa30.02■■■□□ 2.4
SUMO3-205ENST00000466861 BICDL1Q6ZP65 573 aa30.02■■■□□ 2.4
SUMO3-205ENST00000466861 XAGE3Q8WTP9 111 aa30.02■■■□□ 2.4
SUMO3-205ENST00000466861 EXOSC9Q06265 439 aaKnown RBP30.01■■■□□ 2.39
SUMO3-205ENST00000466861 HSP90AB3PQ58FF7 597 aa30.01■■■□□ 2.39
SUMO3-205ENST00000466861 NLGN2Q8NFZ4 835 aa30.01■■■□□ 2.39
SUMO3-205ENST00000466861 NIP7Q9Y221 180 aaKnown RBP eCLIP30.01■■■□□ 2.39
SUMO3-205ENST00000466861 VAMP4O75379 141 aa30■■■□□ 2.39
SUMO3-205ENST00000466861 SLFN5Q08AF3 891 aa30■■■□□ 2.39
SUMO3-205ENST00000466861 STK31Q9BXU1 1019 aa30■■■□□ 2.39
SUMO3-205ENST00000466861 ZBTB3Q9H5J0 574 aa30■■■□□ 2.39
SUMO3-205ENST00000466861 PLBD2Q8NHP8 589 aa29.99■■■□□ 2.39
SUMO3-205ENST00000466861 PDZRN3Q9UPQ7 1066 aa29.98■■■□□ 2.39
SUMO3-205ENST00000466861 IBTKQ9P2D0 1353 aaPredicted RBP29.98■■■□□ 2.39
SUMO3-205ENST00000466861 KIAA1551Q9HCM1 1747 aa29.97■■■□□ 2.39
SUMO3-205ENST00000466861 AIMP1Q12904 312 aaKnown RBP29.97■■■□□ 2.39
SUMO3-205ENST00000466861 ANKRD13DQ6ZTN6 518 aa29.97■■■□□ 2.39
SUMO3-205ENST00000466861 ANKRD36CQ5JPF3 1778 aa29.96■■■□□ 2.39
SUMO3-205ENST00000466861 PXDNLA1KZ92 1463 aa29.96■■■□□ 2.39
SUMO3-205ENST00000466861 PARP10Q53GL7 1025 aa29.96■■■□□ 2.39
SUMO3-205ENST00000466861 TPTE2Q6XPS3 522 aa29.96■■■□□ 2.39
SUMO3-205ENST00000466861 ZNF34Q8IZ26 560 aa29.96■■■□□ 2.39
SUMO3-205ENST00000466861 TRMT2AQ8IZ69 625 aaKnown RBP29.96■■■□□ 2.39
SUMO3-205ENST00000466861 CNBD1Q8NA66 436 aa29.96■■■□□ 2.39
SUMO3-205ENST00000466861 PRR5LQ6MZQ0 368 aa29.95■■■□□ 2.39
SUMO3-205ENST00000466861 NYXQ9GZU5 481 aa29.95■■■□□ 2.39
SUMO3-205ENST00000466861 NBPF5PQ86XG9 351 aaPredicted RBP29.94■■■□□ 2.38
SUMO3-205ENST00000466861 BRIP1Q9BX63 1249 aa29.94■■■□□ 2.38
SUMO3-205ENST00000466861 DDX58O95786 925 aaKnown RBP29.93■■■□□ 2.38
SUMO3-205ENST00000466861 ST5P78524 1137 aa29.93■■■□□ 2.38
SUMO3-205ENST00000466861 TCIRG1Q13488 830 aa29.93■■■□□ 2.38
SUMO3-205ENST00000466861 ZNF428Q96B54 188 aa29.92■■■□□ 2.38
SUMO3-205ENST00000466861 RNF123Q5XPI4 1314 aa29.92■■■□□ 2.38
SUMO3-205ENST00000466861 N4BP2Q86UW6 1770 aaPredicted RBP29.91■■■□□ 2.38
SUMO3-205ENST00000466861 NPHP1O15259 732 aa29.91■■■□□ 2.38
SUMO3-205ENST00000466861 PDE6BP35913 854 aa29.91■■■□□ 2.38
SUMO3-205ENST00000466861 PHAXQ9H814 394 aaKnown RBP29.91■■■□□ 2.38
SUMO3-205ENST00000466861 BRCA1P38398 1863 aaKnown RBP29.91■■■□□ 2.38
SUMO3-205ENST00000466861 SLC4A2P04920 1241 aa29.9■■■□□ 2.38
SUMO3-205ENST00000466861 HNRNPUQ00839 825 aaKnown RBP eCLIP29.9■■■□□ 2.38
SUMO3-205ENST00000466861 PPP1R42Q7Z4L9 355 aa29.9■■■□□ 2.38
SUMO3-205ENST00000466861 ANKRD31Q8N7Z5 1873 aa29.9■■■□□ 2.38
SUMO3-205ENST00000466861 ARFGEF2Q9Y6D5 1785 aa29.9■■■□□ 2.38
SUMO3-205ENST00000466861 UBN2Q6ZU65 1347 aa29.89■■■□□ 2.38
SUMO3-205ENST00000466861 DLEC1Q9Y238 1755 aa29.88■■■□□ 2.37
SUMO3-205ENST00000466861 CT47B1P0C2W7 299 aaPredicted RBP29.88■■■□□ 2.37
SUMO3-205ENST00000466861 DPEP1P16444 411 aa29.88■■■□□ 2.37
SUMO3-205ENST00000466861 TRIM28Q13263 835 aaKnown RBP29.88■■■□□ 2.37
SUMO3-205ENST00000466861 CDCA7LQ96GN5 454 aa29.88■■■□□ 2.37
SUMO3-205ENST00000466861 RIC1Q4ADV7 1423 aa29.88■■■□□ 2.37
SUMO3-205ENST00000466861 A0A0G2JLW4 131 aa29.87■■■□□ 2.37
SUMO3-205ENST00000466861 GPTP24298 496 aa29.87■■■□□ 2.37
SUMO3-205ENST00000466861 GPR162Q16538 588 aa29.87■■■□□ 2.37
SUMO3-205ENST00000466861 RIC3Q7Z5B4 369 aa29.87■■■□□ 2.37
SUMO3-205ENST00000466861 GRIN3BO60391 1043 aa29.86■■■□□ 2.37
SUMO3-205ENST00000466861 KCNA3P22001 575 aa29.86■■■□□ 2.37
SUMO3-205ENST00000466861 PIM2Q9P1W9 311 aa29.86■■■□□ 2.37
SUMO3-205ENST00000466861 H0YIN7 160 aa29.85■■■□□ 2.37
SUMO3-205ENST00000466861 GTF2E1P29083 439 aaPredicted RBP29.85■■■□□ 2.37
SUMO3-205ENST00000466861 SUSD4Q5VX71 490 aa29.85■■■□□ 2.37
SUMO3-205ENST00000466861 KSR2Q6VAB6 950 aa29.85■■■□□ 2.37
SUMO3-205ENST00000466861 NLRP10Q86W26 655 aa29.85■■■□□ 2.37
SUMO3-205ENST00000466861 ISCA1Q9BUE6 129 aa29.85■■■□□ 2.37
SUMO3-205ENST00000466861 NTSR2O95665 410 aa29.84■■■□□ 2.37
SUMO3-205ENST00000466861 ZBED9Q6R2W3 1325 aa29.83■■■□□ 2.37
SUMO3-205ENST00000466861 KLRG2A4D1S0 409 aaPredicted RBP29.83■■■□□ 2.37
SUMO3-205ENST00000466861 FLIIQ13045 1269 aa29.83■■■□□ 2.37
SUMO3-205ENST00000466861 UTP14AQ9BVJ6 771 aaKnown RBP29.83■■■□□ 2.37
SUMO3-205ENST00000466861 TCERG1O14776 1098 aaKnown RBP29.82■■■□□ 2.36
SUMO3-205ENST00000466861 C2CD5Q86YS7 1000 aa29.82■■■□□ 2.36
SUMO3-205ENST00000466861 METTL22Q9BUU2 404 aaPredicted RBP29.82■■■□□ 2.36
SUMO3-205ENST00000466861 ARFGEF1Q9Y6D6 1849 aa29.81■■■□□ 2.36
SUMO3-205ENST00000466861 FAM177BA6PVY3 158 aa29.8■■■□□ 2.36
SUMO3-205ENST00000466861 CHRNA5P30532 468 aa29.8■■■□□ 2.36
SUMO3-205ENST00000466861 SLC10A5Q5PT55 438 aa29.8■■■□□ 2.36
SUMO3-205ENST00000466861 PI4KAP2A4QPH2 592 aa29.79■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms