RNA–Protein interactions for RNA: ENST00000466684.5

BRD9-201, Transcript of bromodomain containing 9, humanhuman

TSL 2

Gene BRD9, Length 1,417 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-201ENST00000466684 TAOK3Q9H2K8 898 aa21.74■■□□□ 1.07
BRD9-201ENST00000466684 SOGA3Q5TF21 947 aa21.73■■□□□ 1.07
BRD9-201ENST00000466684 USP16Q9Y5T5 823 aa21.73■■□□□ 1.07
BRD9-201ENST00000466684 DICER1Q9UPY3 1922 aaKnown RBP21.73■■□□□ 1.07
BRD9-201ENST00000466684 SNRPA1P09661 255 aaKnown RBP21.72■■□□□ 1.07
BRD9-201ENST00000466684 U2AF1L5P0DN76 240 aaPredicted RBP21.72■■□□□ 1.07
BRD9-201ENST00000466684 SRGNP10124 158 aa21.72■■□□□ 1.07
BRD9-201ENST00000466684 U2AF1Q01081 240 aaKnown RBP eCLIP21.72■■□□□ 1.07
BRD9-201ENST00000466684 CLEC4GQ6UXB4 293 aa21.72■■□□□ 1.07
BRD9-201ENST00000466684 MASTLQ96GX5 879 aa21.72■■□□□ 1.07
BRD9-201ENST00000466684 ZNF652Q9Y2D9 606 aa21.72■■□□□ 1.07
BRD9-201ENST00000466684 POTECB2RU33 542 aa21.72■■□□□ 1.07
BRD9-201ENST00000466684 PRPF40BQ6NWY9 871 aaKnown RBP21.72■■□□□ 1.07
BRD9-201ENST00000466684 NBPF5PQ86XG9 351 aaPredicted RBP21.71■■□□□ 1.07
BRD9-201ENST00000466684 ARFGEF2Q9Y6D5 1785 aa21.7■■□□□ 1.06
BRD9-201ENST00000466684 MCM10Q7L590 875 aa21.7■■□□□ 1.06
BRD9-201ENST00000466684 SLX4Q8IY92 1834 aa21.69■■□□□ 1.06
BRD9-201ENST00000466684 HTATSF1O43719 755 aaKnown RBP21.69■■□□□ 1.06
BRD9-201ENST00000466684 PIP4K2AP48426 406 aaPredicted RBP21.69■■□□□ 1.06
BRD9-201ENST00000466684 PRAMEF22A3QJZ6 481 aa21.68■■□□□ 1.06
BRD9-201ENST00000466684 RGL2O15211 777 aa21.68■■□□□ 1.06
BRD9-201ENST00000466684 PPP2R1AP30153 589 aa21.68■■□□□ 1.06
BRD9-201ENST00000466684 CACNA1SQ13698 1873 aa21.68■■□□□ 1.06
BRD9-201ENST00000466684 COL13A1Q5TAT6 717 aaPredicted RBP21.67■■□□□ 1.06
BRD9-201ENST00000466684 TPTE2Q6XPS3 522 aa21.66■■□□□ 1.06
BRD9-201ENST00000466684 NPR1P16066 1061 aa21.65■■□□□ 1.06
BRD9-201ENST00000466684 DDNO94850 711 aaPredicted RBP21.64■■□□□ 1.06
BRD9-201ENST00000466684 CCDC93Q567U6 631 aa21.64■■□□□ 1.06
BRD9-201ENST00000466684 CHADLQ6NUI6 762 aa21.64■■□□□ 1.06
BRD9-201ENST00000466684 NIP7Q9Y221 180 aaKnown RBP eCLIP21.64■■□□□ 1.06
BRD9-201ENST00000466684 KLRG2A4D1S0 409 aaPredicted RBP21.63■■□□□ 1.05
BRD9-201ENST00000466684 DCTN1Q14203 1278 aa21.63■■□□□ 1.05
BRD9-201ENST00000466684 TAF7Q15545 349 aaPredicted RBP21.63■■□□□ 1.05
BRD9-201ENST00000466684 C7orf43Q8WVR3 580 aa21.63■■□□□ 1.05
BRD9-201ENST00000466684 IQCA1LA6NCM1 817 aa21.63■■□□□ 1.05
BRD9-201ENST00000466684 NBPF26B4DH59 902 aa21.63■■□□□ 1.05
BRD9-201ENST00000466684 NBPF10Q6P3W6 841 aaKnown RBP21.63■■□□□ 1.05
BRD9-201ENST00000466684 NBPF15Q8N660 670 aa21.63■■□□□ 1.05
BRD9-201ENST00000466684 NEFMP07197 916 aa21.62■■□□□ 1.05
BRD9-201ENST00000466684 CREBZFQ9NS37 354 aa21.61■■□□□ 1.05
BRD9-201ENST00000466684 HSPA1AP0DMV8 641 aaKnown RBP21.6■■□□□ 1.05
BRD9-201ENST00000466684 HSPA1BP0DMV9 641 aaKnown RBP21.6■■□□□ 1.05
BRD9-201ENST00000466684 GTF2E1P29083 439 aaPredicted RBP21.6■■□□□ 1.05
BRD9-201ENST00000466684 FKBP4Q02790 459 aaKnown RBP eCLIP21.6■■□□□ 1.05
BRD9-201ENST00000466684 RTKN2Q8IZC4 609 aa21.6■■□□□ 1.05
BRD9-201ENST00000466684 TNS4Q8IZW8 715 aa21.6■■□□□ 1.05
BRD9-201ENST00000466684 L3MBTL3Q96JM7 780 aaPredicted RBP21.6■■□□□ 1.05
BRD9-201ENST00000466684 ALDH1B1P30837 517 aa21.59■■□□□ 1.05
BRD9-201ENST00000466684 LAMB4A4D0S4 1761 aa21.59■■□□□ 1.05
BRD9-201ENST00000466684 SCN4AP35499 1836 aa21.58■■□□□ 1.05
BRD9-201ENST00000466684 FAM177BA6PVY3 158 aa21.58■■□□□ 1.05
BRD9-201ENST00000466684 PNISRQ8TF01 805 aaKnown RBP21.58■■□□□ 1.05
BRD9-201ENST00000466684 POTEIP0CG38 1075 aa21.57■■□□□ 1.04
BRD9-201ENST00000466684 POTEJP0CG39 1038 aa21.57■■□□□ 1.04
BRD9-201ENST00000466684 HLFQ16534 295 aa21.57■■□□□ 1.04
BRD9-201ENST00000466684 LDHDQ86WU2 507 aa21.57■■□□□ 1.04
BRD9-201ENST00000466684 MIS18AQ9NYP9 233 aa21.57■■□□□ 1.04
BRD9-201ENST00000466684 NYXQ9GZU5 481 aa21.56■■□□□ 1.04
BRD9-201ENST00000466684 ZNF277Q9NRM2 450 aaPredicted RBP21.56■■□□□ 1.04
BRD9-201ENST00000466684 TAF1DQ9H5J8 278 aaPredicted RBP21.55■■□□□ 1.04
BRD9-201ENST00000466684 ERVV-1B6SEH8 477 aa21.55■■□□□ 1.04
BRD9-201ENST00000466684 MKRN1Q9UHC7 482 aaKnown RBP21.54■■□□□ 1.04
BRD9-201ENST00000466684 KDM3BQ7LBC6 1761 aa21.53■■□□□ 1.04
BRD9-201ENST00000466684 IARSP41252 1262 aaKnown RBP21.53■■□□□ 1.04
BRD9-201ENST00000466684 OLFM4Q6UX06 510 aa21.53■■□□□ 1.04
BRD9-201ENST00000466684 KIF6Q6ZMV9 814 aa21.53■■□□□ 1.04
BRD9-201ENST00000466684 NGEFQ8N5V2 710 aa21.53■■□□□ 1.04
BRD9-201ENST00000466684 HACL1Q9UJ83 578 aa21.53■■□□□ 1.04
BRD9-201ENST00000466684 MAP3K15Q6ZN16 1313 aa21.52■■□□□ 1.04
BRD9-201ENST00000466684 PASKQ96RG2 1323 aa21.52■■□□□ 1.04
BRD9-201ENST00000466684 ZNF541Q9H0D2 1346 aa21.52■■□□□ 1.04
BRD9-201ENST00000466684 DLG5Q8TDM6 1919 aa21.52■■□□□ 1.04
BRD9-201ENST00000466684 CAPN15O75808 1086 aa21.52■■□□□ 1.04
BRD9-201ENST00000466684 CRY2Q49AN0 593 aa21.52■■□□□ 1.04
BRD9-201ENST00000466684 EAPPQ56P03 285 aaPredicted RBP21.52■■□□□ 1.04
BRD9-201ENST00000466684 SYNE4Q8N205 404 aa21.52■■□□□ 1.04
BRD9-201ENST00000466684 EIF4A1P60842 406 aaKnown RBP21.51■■□□□ 1.03
BRD9-201ENST00000466684 CC2D2BQ6DHV5 1058 aa21.51■■□□□ 1.03
BRD9-201ENST00000466684 PSMD1Q99460 953 aa21.51■■□□□ 1.03
BRD9-201ENST00000466684 PNNQ9H307 717 aaKnown RBP21.51■■□□□ 1.03
BRD9-201ENST00000466684 RRP7AQ9Y3A4 280 aaKnown RBP21.51■■□□□ 1.03
BRD9-201ENST00000466684 NUP98P52948 1817 aa21.5■■□□□ 1.03
BRD9-201ENST00000466684 FZD9O00144 591 aa21.5■■□□□ 1.03
BRD9-201ENST00000466684 EPHX2P34913 555 aa21.5■■□□□ 1.03
BRD9-201ENST00000466684 PNMA8AQ86V59 439 aaPredicted RBP21.5■■□□□ 1.03
BRD9-201ENST00000466684 NUTM1Q86Y26 1132 aa21.5■■□□□ 1.03
BRD9-201ENST00000466684 JDP2Q8WYK2 163 aa21.5■■□□□ 1.03
BRD9-201ENST00000466684 CNTNAP1P78357 1384 aa21.5■■□□□ 1.03
BRD9-201ENST00000466684 ABCC12Q96J65 1359 aa21.5■■□□□ 1.03
BRD9-201ENST00000466684 IBTKQ9P2D0 1353 aaPredicted RBP21.5■■□□□ 1.03
BRD9-201ENST00000466684 NFE2L2Q16236 605 aa21.49■■□□□ 1.03
BRD9-201ENST00000466684 GPC2Q8N158 579 aa21.49■■□□□ 1.03
BRD9-201ENST00000466684 RPGRQ92834 1020 aaKnown RBP21.49■■□□□ 1.03
BRD9-201ENST00000466684 PLEKHF1Q96S99 279 aa21.49■■□□□ 1.03
BRD9-201ENST00000466684 CLEC11AQ9Y240 323 aa21.49■■□□□ 1.03
BRD9-201ENST00000466684 RIC1Q4ADV7 1423 aa21.49■■□□□ 1.03
BRD9-201ENST00000466684 TMEM88BA6NKF7 163 aa21.48■■□□□ 1.03
BRD9-201ENST00000466684 GRIPAP1Q4V328 841 aa21.48■■□□□ 1.03
BRD9-201ENST00000466684 PCNTO95613 3336 aa21.48■■□□□ 1.03
BRD9-201ENST00000466684 ITGBL1O95965 494 aaPredicted RBP21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms