RNA–Protein interactions for RNA: ENST00000466425.1

PSMB4-202, Transcript of proteasome subunit beta 4, humanhuman

TSL 2

Gene PSMB4, Length 665 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4-202ENST00000466425 CCDC30Q5VVM6 783 aa8.23□□□□□ -1.09
PSMB4-202ENST00000466425 SKAP1Q86WV1 359 aa8.23□□□□□ -1.09
PSMB4-202ENST00000466425 EPAS1Q99814 870 aa8.23□□□□□ -1.09
PSMB4-202ENST00000466425 C19orf44Q9H6X5 657 aa8.23□□□□□ -1.09
PSMB4-202ENST00000466425 USP35Q9P2H5 1018 aa8.23□□□□□ -1.09
PSMB4-202ENST00000466425 MAP2P11137 1827 aaKnown RBP8.23□□□□□ -1.09
PSMB4-202ENST00000466425 MAP3K5Q99683 1374 aa8.22□□□□□ -1.09
PSMB4-202ENST00000466425 ROBO1Q9Y6N7 1651 aa8.22□□□□□ -1.09
PSMB4-202ENST00000466425 HMMRO75330 724 aa8.22□□□□□ -1.09
PSMB4-202ENST00000466425 CCT4P50991 539 aaKnown RBP8.22□□□□□ -1.09
PSMB4-202ENST00000466425 KCNC4Q03721 635 aa8.22□□□□□ -1.09
PSMB4-202ENST00000466425 TAF7Q15545 349 aaPredicted RBP8.22□□□□□ -1.09
PSMB4-202ENST00000466425 AMOTQ4VCS5 1084 aa8.22□□□□□ -1.09
PSMB4-202ENST00000466425 CHD1LQ86WJ1 897 aa8.22□□□□□ -1.09
PSMB4-202ENST00000466425 RPAP2Q8IXW5 612 aaPredicted RBP8.22□□□□□ -1.09
PSMB4-202ENST00000466425 FMN2Q9NZ56 1722 aa8.22□□□□□ -1.09
PSMB4-202ENST00000466425 MAP3K7O43318 606 aa8.21□□□□□ -1.1
PSMB4-202ENST00000466425 PLEKHO1Q53GL0 409 aaPredicted RBP8.21□□□□□ -1.1
PSMB4-202ENST00000466425 NUTM2GQ5VZR2 741 aa8.21□□□□□ -1.1
PSMB4-202ENST00000466425 KCNV2Q8TDN2 545 aa8.21□□□□□ -1.1
PSMB4-202ENST00000466425 DCCP43146 1447 aa8.2□□□□□ -1.1
PSMB4-202ENST00000466425 PHLPP1O60346 1717 aa8.2□□□□□ -1.1
PSMB4-202ENST00000466425 GCP02774 474 aa8.2□□□□□ -1.1
PSMB4-202ENST00000466425 HOXB7P09629 217 aa8.2□□□□□ -1.1
PSMB4-202ENST00000466425 ATF3P18847 181 aa8.2□□□□□ -1.1
PSMB4-202ENST00000466425 TREML4Q6UXN2 200 aa8.2□□□□□ -1.1
PSMB4-202ENST00000466425 USP54Q70EL1 1684 aa8.2□□□□□ -1.1
PSMB4-202ENST00000466425 NHSL1Q5SYE7 1610 aa8.19□□□□□ -1.1
PSMB4-202ENST00000466425 PIK3C2AO00443 1686 aa8.19□□□□□ -1.1
PSMB4-202ENST00000466425 TOM1O60784 492 aa8.19□□□□□ -1.1
PSMB4-202ENST00000466425 GNAI3P08754 354 aa8.19□□□□□ -1.1
PSMB4-202ENST00000466425 BMP2KLQ5H9B9 411 aa8.19□□□□□ -1.1
PSMB4-202ENST00000466425 C6orf132Q5T0Z8 1188 aa8.19□□□□□ -1.1
PSMB4-202ENST00000466425 ANKRD45Q5TZF3 282 aa8.19□□□□□ -1.1
PSMB4-202ENST00000466425 KRT28Q7Z3Y7 464 aa8.19□□□□□ -1.1
PSMB4-202ENST00000466425 ARHGEF25Q86VW2 580 aa8.19□□□□□ -1.1
PSMB4-202ENST00000466425 ANKRD44Q8N8A2 993 aa8.19□□□□□ -1.1
PSMB4-202ENST00000466425 ARHGEF1Q92888 912 aaKnown RBP8.19□□□□□ -1.1
PSMB4-202ENST00000466425 LTV1Q96GA3 475 aaPredicted RBP8.19□□□□□ -1.1
PSMB4-202ENST00000466425 SLC4A5Q9BY07 1137 aa8.19□□□□□ -1.1
PSMB4-202ENST00000466425 RGPD1P0DJD0 1748 aa8.19□□□□□ -1.1
PSMB4-202ENST00000466425 PEAK1Q9H792 1746 aa8.19□□□□□ -1.1
PSMB4-202ENST00000466425 USP19O94966 1318 aa8.19□□□□□ -1.1
PSMB4-202ENST00000466425 MSH6P52701 1360 aa8.19□□□□□ -1.1
PSMB4-202ENST00000466425 TMEM94Q12767 1356 aa8.19□□□□□ -1.1
PSMB4-202ENST00000466425 MST1RQ04912 1400 aa8.19□□□□□ -1.1
PSMB4-202ENST00000466425 FOXO3O43524 673 aa8.18□□□□□ -1.1
PSMB4-202ENST00000466425 AKAP4Q5JQC9 854 aa8.18□□□□□ -1.1
PSMB4-202ENST00000466425 C1orf141Q5JVX7 400 aa8.18□□□□□ -1.1
PSMB4-202ENST00000466425 TBC1D32Q96NH3 1257 aa8.18□□□□□ -1.1
PSMB4-202ENST00000466425 DCTPP1Q9H773 170 aa8.18□□□□□ -1.1
PSMB4-202ENST00000466425 STK17AQ9UEE5 414 aa8.18□□□□□ -1.1
PSMB4-202ENST00000466425 ARIH1Q9Y4X5 557 aaPredicted RBP8.18□□□□□ -1.1
PSMB4-202ENST00000466425 PLEKHG2Q9H7P9 1386 aa8.18□□□□□ -1.1
PSMB4-202ENST00000466425 PPP1R3GB7ZBB8 358 aa8.17□□□□□ -1.1
PSMB4-202ENST00000466425 UBAP1LF5GYI3 381 aa8.17□□□□□ -1.1
PSMB4-202ENST00000466425 COL9A1P20849 921 aa8.17□□□□□ -1.1
PSMB4-202ENST00000466425 TEFQ10587 303 aa8.17□□□□□ -1.1
PSMB4-202ENST00000466425 IL17REQ8NFR9 667 aa8.17□□□□□ -1.1
PSMB4-202ENST00000466425 ORAI2Q96SN7 254 aa8.17□□□□□ -1.1
PSMB4-202ENST00000466425 PRKD2Q9BZL6 878 aa8.17□□□□□ -1.1
PSMB4-202ENST00000466425 LNPKQ9C0E8 428 aa8.17□□□□□ -1.1
PSMB4-202ENST00000466425 HDAC5Q9UQL6 1122 aa8.17□□□□□ -1.1
PSMB4-202ENST00000466425 C1orf167Q5SNV9 1468 aa8.17□□□□□ -1.1
PSMB4-202ENST00000466425 KIF1AQ12756 1690 aa8.17□□□□□ -1.1
PSMB4-202ENST00000466425 OVOS2A0A0G2JMS6 1433 aa8.16□□□□□ -1.1
PSMB4-202ENST00000466425 ZBTB7CA1YPR0 619 aa8.16□□□□□ -1.1
PSMB4-202ENST00000466425 NFAT5O94916 1531 aa8.16□□□□□ -1.1
PSMB4-202ENST00000466425 GNAI2P04899 355 aa8.16□□□□□ -1.1
PSMB4-202ENST00000466425 FLIIQ13045 1269 aa8.16□□□□□ -1.1
PSMB4-202ENST00000466425 NCAPD2Q15021 1401 aa8.16□□□□□ -1.1
PSMB4-202ENST00000466425 NBPF6Q5VWK0 638 aa8.16□□□□□ -1.1
PSMB4-202ENST00000466425 ZNF530Q6P9A1 599 aaPredicted RBP8.16□□□□□ -1.1
PSMB4-202ENST00000466425 CASC1Q6TDU7 716 aa8.16□□□□□ -1.1
PSMB4-202ENST00000466425 NPHP3Q7Z494 1330 aa8.16□□□□□ -1.1
PSMB4-202ENST00000466425 ANKRD24Q8TF21 1146 aa8.16□□□□□ -1.1
PSMB4-202ENST00000466425 CEMIPQ8WUJ3 1361 aa8.16□□□□□ -1.1
PSMB4-202ENST00000466425 NBPF4Q96M43 638 aa8.16□□□□□ -1.1
PSMB4-202ENST00000466425 ZBED2Q9BTP6 218 aa8.16□□□□□ -1.1
PSMB4-202ENST00000466425 AHDC1Q5TGY3 1603 aaPredicted RBP8.15□□□□□ -1.1
PSMB4-202ENST00000466425 SLIT3O75094 1523 aa8.15□□□□□ -1.1
PSMB4-202ENST00000466425 EN1Q05925 392 aaPredicted RBP8.15□□□□□ -1.1
PSMB4-202ENST00000466425 FKBP5Q13451 457 aaPredicted RBP8.15□□□□□ -1.1
PSMB4-202ENST00000466425 KRT24Q2M2I5 525 aa8.15□□□□□ -1.1
PSMB4-202ENST00000466425 TSR1Q2NL82 804 aaKnown RBP8.15□□□□□ -1.1
PSMB4-202ENST00000466425 PROX2Q3B8N5 592 aa8.15□□□□□ -1.1
PSMB4-202ENST00000466425 LCE2AQ5TA79 106 aaPredicted RBP8.15□□□□□ -1.1
PSMB4-202ENST00000466425 HDGFL1Q5TGJ6 251 aa8.15□□□□□ -1.1
PSMB4-202ENST00000466425 CEP85Q6P2H3 762 aa8.15□□□□□ -1.1
PSMB4-202ENST00000466425 ZC3H15Q8WU90 426 aaKnown RBP8.15□□□□□ -1.1
PSMB4-202ENST00000466425 C22orf23Q9BZE7 217 aa8.15□□□□□ -1.1
PSMB4-202ENST00000466425 MIS18AQ9NYP9 233 aa8.15□□□□□ -1.1
PSMB4-202ENST00000466425 MARF1Q9Y4F3 1742 aaKnown RBP8.15□□□□□ -1.11
PSMB4-202ENST00000466425 RGS12O14924 1447 aa8.14□□□□□ -1.11
PSMB4-202ENST00000466425 MFAP1P55081 439 aaKnown RBP8.14□□□□□ -1.11
PSMB4-202ENST00000466425 SLC4A10Q6U841 1118 aa8.14□□□□□ -1.11
PSMB4-202ENST00000466425 SIRT2Q8IXJ6 389 aa8.14□□□□□ -1.11
PSMB4-202ENST00000466425 C1orf115Q9H7X2 142 aa8.14□□□□□ -1.11
PSMB4-202ENST00000466425 COL16A1Q07092 1604 aaPredicted RBP8.14□□□□□ -1.11
PSMB4-202ENST00000466425 BTBD11A6QL63 1104 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 169.9 ms