RNA–Protein interactions for RNA: ENST00000466392.1

EDEM3-204, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 5

Gene EDEM3, Length 491 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-204ENST00000466392 PDIA6Q15084 440 aa15.39■□□□□ 0.05
EDEM3-204ENST00000466392 ELL2O00472 640 aaPredicted RBP15.38■□□□□ 0.05
EDEM3-204ENST00000466392 WWC1Q8IX03 1113 aa15.38■□□□□ 0.05
EDEM3-204ENST00000466392 TSR2Q969E8 191 aaKnown RBP15.38■□□□□ 0.05
EDEM3-204ENST00000466392 ZBTB3Q9H5J0 574 aa15.38■□□□□ 0.05
EDEM3-204ENST00000466392 IFT57Q9NWB7 429 aa15.38■□□□□ 0.05
EDEM3-204ENST00000466392 FAM177BA6PVY3 158 aa15.37■□□□□ 0.05
EDEM3-204ENST00000466392 KCNA3P22001 575 aa15.37■□□□□ 0.05
EDEM3-204ENST00000466392 YY1P25490 414 aa15.37■□□□□ 0.05
EDEM3-204ENST00000466392 TGFB2P61812 414 aa15.37■□□□□ 0.05
EDEM3-204ENST00000466392 GNAI1P63096 354 aa15.37■□□□□ 0.05
EDEM3-204ENST00000466392 LRP10Q7Z4F1 713 aa15.37■□□□□ 0.05
EDEM3-204ENST00000466392 ANKRD36CQ5JPF3 1778 aa15.36■□□□□ 0.05
EDEM3-204ENST00000466392 ARFGEF1Q9Y6D6 1849 aa15.36■□□□□ 0.05
EDEM3-204ENST00000466392 DUSP27Q5VZP5 1158 aa15.36■□□□□ 0.05
EDEM3-204ENST00000466392 PRR5LQ6MZQ0 368 aa15.36■□□□□ 0.05
EDEM3-204ENST00000466392 SETDB2Q96T68 719 aa15.36■□□□□ 0.05
EDEM3-204ENST00000466392 CHPF2Q9P2E5 772 aa15.36■□□□□ 0.05
EDEM3-204ENST00000466392 NIP7Q9Y221 180 aaKnown RBP eCLIP15.36■□□□□ 0.05
EDEM3-204ENST00000466392 BCS1LQ9Y276 419 aa15.36■□□□□ 0.05
EDEM3-204ENST00000466392 ERBB4Q15303 1308 aa15.36■□□□□ 0.05
EDEM3-204ENST00000466392 CALD1Q05682 793 aaKnown RBP15.35■□□□□ 0.05
EDEM3-204ENST00000466392 AIMP1Q12904 312 aaKnown RBP15.35■□□□□ 0.05
EDEM3-204ENST00000466392 HDGFL1Q5TGJ6 251 aa15.35■□□□□ 0.05
EDEM3-204ENST00000466392 KIF6Q6ZMV9 814 aa15.35■□□□□ 0.05
EDEM3-204ENST00000466392 C8orf58Q8NAV2 365 aa15.35■□□□□ 0.05
EDEM3-204ENST00000466392 ZNF652Q9Y2D9 606 aa15.35■□□□□ 0.05
EDEM3-204ENST00000466392 MAP3K15Q6ZN16 1313 aa15.35■□□□□ 0.05
EDEM3-204ENST00000466392 TNRC6CQ9HCJ0 1690 aaKnown RBP15.35■□□□□ 0.05
EDEM3-204ENST00000466392 GPTP24298 496 aa15.34■□□□□ 0.05
EDEM3-204ENST00000466392 CCDC27Q2M243 656 aa15.34■□□□□ 0.05
EDEM3-204ENST00000466392 CLEC4GQ6UXB4 293 aa15.34■□□□□ 0.05
EDEM3-204ENST00000466392 NPHP1O15259 732 aa15.33■□□□□ 0.04
EDEM3-204ENST00000466392 TSPYL6Q8N831 410 aa15.33■□□□□ 0.04
EDEM3-204ENST00000466392 CNBD1Q8NA66 436 aa15.33■□□□□ 0.04
EDEM3-204ENST00000466392 XAGE3Q8WTP9 111 aa15.33■□□□□ 0.04
EDEM3-204ENST00000466392 ARFGEF2Q9Y6D5 1785 aa15.33■□□□□ 0.04
EDEM3-204ENST00000466392 GRIN3BO60391 1043 aa15.32■□□□□ 0.04
EDEM3-204ENST00000466392 COPS6Q7L5N1 327 aa15.32■□□□□ 0.04
EDEM3-204ENST00000466392 NBPF5PQ86XG9 351 aaPredicted RBP15.32■□□□□ 0.04
EDEM3-204ENST00000466392 C2CD5Q86YS7 1000 aa15.32■□□□□ 0.04
EDEM3-204ENST00000466392 ZNF428Q96B54 188 aa15.32■□□□□ 0.04
EDEM3-204ENST00000466392 SPINK5Q9NQ38 1064 aaPredicted RBP15.32■□□□□ 0.04
EDEM3-204ENST00000466392 DDX21Q9NR30 783 aaKnown RBP eCLIP15.32■□□□□ 0.04
EDEM3-204ENST00000466392 UBN2Q6ZU65 1347 aa15.32■□□□□ 0.04
EDEM3-204ENST00000466392 ERVV-1B6SEH8 477 aa15.31■□□□□ 0.04
EDEM3-204ENST00000466392 TCERG1O14776 1098 aaKnown RBP15.31■□□□□ 0.04
EDEM3-204ENST00000466392 HOXB7P09629 217 aa15.31■□□□□ 0.04
EDEM3-204ENST00000466392 PIM2Q9P1W9 311 aa15.31■□□□□ 0.04
EDEM3-204ENST00000466392 ATP10DQ9P241 1426 aa15.31■□□□□ 0.04
EDEM3-204ENST00000466392 GIGYF2Q6Y7W6 1299 aaKnown RBP15.3■□□□□ 0.04
EDEM3-204ENST00000466392 NUTM1Q86Y26 1132 aa15.3■□□□□ 0.04
EDEM3-204ENST00000466392 ABCC12Q96J65 1359 aa15.29■□□□□ 0.04
EDEM3-204ENST00000466392 FANCIQ9NVI1 1328 aa15.29■□□□□ 0.04
EDEM3-204ENST00000466392 ST5P78524 1137 aa15.29■□□□□ 0.04
EDEM3-204ENST00000466392 DALRD3Q5D0E6 543 aaKnown RBP15.29■□□□□ 0.04
EDEM3-204ENST00000466392 SUSD4Q5VX71 490 aa15.29■□□□□ 0.04
EDEM3-204ENST00000466392 DIEXFQ68CQ4 756 aaKnown RBP15.29■□□□□ 0.04
EDEM3-204ENST00000466392 BRIP1Q9BX63 1249 aa15.29■□□□□ 0.04
EDEM3-204ENST00000466392 PHAXQ9H814 394 aaKnown RBP15.29■□□□□ 0.04
EDEM3-204ENST00000466392 DBF4Q9UBU7 674 aaPredicted RBP15.29■□□□□ 0.04
EDEM3-204ENST00000466392 IL16Q14005 1332 aa15.28■□□□□ 0.04
EDEM3-204ENST00000466392 H0YIN7 160 aa15.28■□□□□ 0.04
EDEM3-204ENST00000466392 RGL2O15211 777 aa15.28■□□□□ 0.04
EDEM3-204ENST00000466392 ZNF34Q8IZ26 560 aa15.28■□□□□ 0.04
EDEM3-204ENST00000466392 MIER1Q8N108 512 aa15.28■□□□□ 0.04
EDEM3-204ENST00000466392 ZNF622Q969S3 477 aaKnown RBP eCLIP15.28■□□□□ 0.04
EDEM3-204ENST00000466392 ZNF219Q9P2Y4 722 aaPredicted RBP15.28■□□□□ 0.04
EDEM3-204ENST00000466392 SLX4Q8IY92 1834 aa15.28■□□□□ 0.04
EDEM3-204ENST00000466392 LAMB2P55268 1798 aa15.28■□□□□ 0.04
EDEM3-204ENST00000466392 PDE6BP35913 854 aa15.27■□□□□ 0.04
EDEM3-204ENST00000466392 ERFEQ4G0M1 354 aa15.27■□□□□ 0.04
EDEM3-204ENST00000466392 NCBP3Q53F19 620 aaKnown RBP15.27■□□□□ 0.04
EDEM3-204ENST00000466392 TPTE2Q6XPS3 522 aa15.27■□□□□ 0.04
EDEM3-204ENST00000466392 ARHGAP27Q6ZUM4 889 aa15.27■□□□□ 0.04
EDEM3-204ENST00000466392 CCDC88AQ3V6T2 1871 aa15.27■□□□□ 0.03
EDEM3-204ENST00000466392 CCER2I3L3R5 266 aa15.26■□□□□ 0.03
EDEM3-204ENST00000466392 GTF2E1P29083 439 aaPredicted RBP15.26■□□□□ 0.03
EDEM3-204ENST00000466392 TWISTNBQ3B726 338 aaPredicted RBP15.26■□□□□ 0.03
EDEM3-204ENST00000466392 WDR63Q8IWG1 891 aa15.26■□□□□ 0.03
EDEM3-204ENST00000466392 SBF1O95248 1867 aa15.26■□□□□ 0.03
EDEM3-204ENST00000466392 NTSR2O95665 410 aa15.25■□□□□ 0.03
EDEM3-204ENST00000466392 EXOSC9Q06265 439 aaKnown RBP15.25■□□□□ 0.03
EDEM3-204ENST00000466392 TTLL6Q8N841 843 aa15.25■□□□□ 0.03
EDEM3-204ENST00000466392 ZNF784Q8NCA9 323 aaPredicted RBP15.25■□□□□ 0.03
EDEM3-204ENST00000466392 HYPKQ9NX55 129 aa15.25■□□□□ 0.03
EDEM3-204ENST00000466392 DDX60Q8IY21 1712 aaKnown RBP15.24■□□□□ 0.03
EDEM3-204ENST00000466392 SRGNP10124 158 aa15.24■□□□□ 0.03
EDEM3-204ENST00000466392 RASSF7Q02833 373 aa15.24■□□□□ 0.03
EDEM3-204ENST00000466392 ANKRD13DQ6ZTN6 518 aa15.24■□□□□ 0.03
EDEM3-204ENST00000466392 SYNE4Q8N205 404 aa15.24■□□□□ 0.03
EDEM3-204ENST00000466392 PLBD2Q8NHP8 589 aa15.24■□□□□ 0.03
EDEM3-204ENST00000466392 ZNF521Q96K83 1311 aa15.23■□□□□ 0.03
EDEM3-204ENST00000466392 ATP5J2-PTCD1G3V325 749 aa15.23■□□□□ 0.03
EDEM3-204ENST00000466392 TCIRG1Q13488 830 aa15.23■□□□□ 0.03
EDEM3-204ENST00000466392 CCDC30Q5VVM6 783 aa15.23■□□□□ 0.03
EDEM3-204ENST00000466392 C3orf67Q6ZVT6 689 aa15.23■□□□□ 0.03
EDEM3-204ENST00000466392 NLRP10Q86W26 655 aa15.23■□□□□ 0.03
EDEM3-204ENST00000466392 NYXQ9GZU5 481 aa15.23■□□□□ 0.03
EDEM3-204ENST00000466392 TAF1P21675 1872 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms