RNA–Protein interactions for RNA: ENST00000466351.1

CDHR3-204, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 362 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-204ENST00000466351 CCDC173Q0VFZ6 552 aa8.3□□□□□ -1.08
CDHR3-204ENST00000466351 PI4KAP1Q8N8J0 262 aa8.3□□□□□ -1.08
CDHR3-204ENST00000466351 TMEM87AQ8NBN3 555 aa8.3□□□□□ -1.08
CDHR3-204ENST00000466351 SYAP1Q96A49 352 aaPredicted RBP8.3□□□□□ -1.08
CDHR3-204ENST00000466351 TMX3Q96JJ7 454 aa8.3□□□□□ -1.08
CDHR3-204ENST00000466351 PPP1R9BQ96SB3 815 aa8.3□□□□□ -1.08
CDHR3-204ENST00000466351 SH2B1Q9NRF2 756 aaPredicted RBP8.3□□□□□ -1.08
CDHR3-204ENST00000466351 SPG7Q9UQ90 795 aa8.3□□□□□ -1.08
CDHR3-204ENST00000466351 WDR33Q9C0J8 1336 aaKnown RBP8.29□□□□□ -1.08
CDHR3-204ENST00000466351 TJP1Q07157 1748 aa8.29□□□□□ -1.08
CDHR3-204ENST00000466351 SHANK3Q9BYB0 1731 aa8.29□□□□□ -1.08
CDHR3-204ENST00000466351 GRM8O00222 908 aa8.29□□□□□ -1.08
CDHR3-204ENST00000466351 SURF6O75683 361 aaKnown RBP8.29□□□□□ -1.08
CDHR3-204ENST00000466351 PHF14O94880 888 aa8.29□□□□□ -1.08
CDHR3-204ENST00000466351 NEK4P51957 841 aa8.29□□□□□ -1.08
CDHR3-204ENST00000466351 LARP1Q6PKG0 1096 aaKnown RBP8.29□□□□□ -1.08
CDHR3-204ENST00000466351 SPRYD3Q8NCJ5 442 aa8.29□□□□□ -1.08
CDHR3-204ENST00000466351 RAPGEF4Q8WZA2 1011 aa8.29□□□□□ -1.08
CDHR3-204ENST00000466351 EVI5LQ96CN4 794 aa8.29□□□□□ -1.08
CDHR3-204ENST00000466351 ZSCAN31Q96LW9 406 aaPredicted RBP8.29□□□□□ -1.08
CDHR3-204ENST00000466351 PHAXQ9H814 394 aaKnown RBP8.29□□□□□ -1.08
CDHR3-204ENST00000466351 SLC52A2Q9HAB3 445 aa8.29□□□□□ -1.08
CDHR3-204ENST00000466351 ANO2Q9NQ90 1003 aa8.29□□□□□ -1.08
CDHR3-204ENST00000466351 ECHDC1Q9NTX5 307 aa8.29□□□□□ -1.08
CDHR3-204ENST00000466351 LMBRD1Q9NUN5 540 aa8.29□□□□□ -1.08
CDHR3-204ENST00000466351 ATP6V1DQ9Y5K8 247 aa8.29□□□□□ -1.08
CDHR3-204ENST00000466351 DDX49Q9Y6V7 483 aaKnown RBP8.29□□□□□ -1.08
CDHR3-204ENST00000466351 PLCH1Q4KWH8 1693 aa8.29□□□□□ -1.08
CDHR3-204ENST00000466351 LRP6O75581 1613 aa8.29□□□□□ -1.08
CDHR3-204ENST00000466351 TRIM6-TRIM34B2RNG4 842 aa8.28□□□□□ -1.08
CDHR3-204ENST00000466351 NEXNQ0ZGT2 675 aa8.28□□□□□ -1.08
CDHR3-204ENST00000466351 CSPP1Q1MSJ5 1256 aa8.28□□□□□ -1.08
CDHR3-204ENST00000466351 KIAA1211Q6ZU35 1233 aa8.28□□□□□ -1.08
CDHR3-204ENST00000466351 KRT28Q7Z3Y7 464 aa8.28□□□□□ -1.08
CDHR3-204ENST00000466351 C14orf37Q86TY3 774 aa8.28□□□□□ -1.08
CDHR3-204ENST00000466351 CADPS2Q86UW7 1296 aa8.28□□□□□ -1.08
CDHR3-204ENST00000466351 AKT1S1Q96B36 256 aa8.28□□□□□ -1.08
CDHR3-204ENST00000466351 DCAF5Q96JK2 942 aa8.28□□□□□ -1.08
CDHR3-204ENST00000466351 ALDH8A1Q9H2A2 487 aaPredicted RBP8.28□□□□□ -1.08
CDHR3-204ENST00000466351 LGR6Q9HBX8 967 aa8.28□□□□□ -1.08
CDHR3-204ENST00000466351 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.28□□□□□ -1.08
CDHR3-204ENST00000466351 MYH15Q9Y2K3 1946 aa8.28□□□□□ -1.08
CDHR3-204ENST00000466351 NHSL1Q5SYE7 1610 aa8.28□□□□□ -1.08
CDHR3-204ENST00000466351 MEGF6O75095 1541 aa8.28□□□□□ -1.08
CDHR3-204ENST00000466351 MYH7P12883 1935 aa8.27□□□□□ -1.09
CDHR3-204ENST00000466351 NBPF7P0C2Y1 421 aaPredicted RBP8.27□□□□□ -1.09
CDHR3-204ENST00000466351 TATP17735 454 aaPredicted RBP8.27□□□□□ -1.09
CDHR3-204ENST00000466351 VPS53Q5VIR6 699 aa8.27□□□□□ -1.09
CDHR3-204ENST00000466351 NUTM2GQ5VZR2 741 aa8.27□□□□□ -1.09
CDHR3-204ENST00000466351 ZNF790Q6PG37 636 aa8.27□□□□□ -1.09
CDHR3-204ENST00000466351 IFNL2Q8IZJ0 200 aa8.27□□□□□ -1.09
CDHR3-204ENST00000466351 FAM184AQ8NB25 1140 aa8.27□□□□□ -1.09
CDHR3-204ENST00000466351 LTV1Q96GA3 475 aaPredicted RBP8.27□□□□□ -1.09
CDHR3-204ENST00000466351 TTC14Q96N46 770 aa8.27□□□□□ -1.09
CDHR3-204ENST00000466351 LSG1Q9H089 658 aaKnown RBP8.27□□□□□ -1.09
CDHR3-204ENST00000466351 C9orf78Q9NZ63 289 aaPredicted RBP8.27□□□□□ -1.09
CDHR3-204ENST00000466351 HMG20BQ9P0W2 317 aa8.27□□□□□ -1.09
CDHR3-204ENST00000466351 CICQ96RK0 1608 aaPredicted RBP8.27□□□□□ -1.09
CDHR3-204ENST00000466351 MYH3P11055 1940 aa8.27□□□□□ -1.09
CDHR3-204ENST00000466351 CCDC171Q6TFL3 1326 aa8.27□□□□□ -1.09
CDHR3-204ENST00000466351 RPAP1Q9BWH6 1393 aaPredicted RBP8.26□□□□□ -1.09
CDHR3-204ENST00000466351 MED23Q9ULK4 1368 aa8.26□□□□□ -1.09
CDHR3-204ENST00000466351 ANKRD36CQ5JPF3 1778 aa8.26□□□□□ -1.09
CDHR3-204ENST00000466351 APBB1O00213 710 aa8.26□□□□□ -1.09
CDHR3-204ENST00000466351 LETM1O95202 739 aaPredicted RBP8.26□□□□□ -1.09
CDHR3-204ENST00000466351 MCM5P33992 734 aa8.26□□□□□ -1.09
CDHR3-204ENST00000466351 NASPP49321 788 aaPredicted RBP8.26□□□□□ -1.09
CDHR3-204ENST00000466351 ANKRD1Q15327 319 aa8.26□□□□□ -1.09
CDHR3-204ENST00000466351 TSGA10IPQ3SY00 556 aa8.26□□□□□ -1.09
CDHR3-204ENST00000466351 RABL6Q3YEC7 729 aaPredicted RBP8.26□□□□□ -1.09
CDHR3-204ENST00000466351 USHBP1Q8N6Y0 703 aa8.26□□□□□ -1.09
CDHR3-204ENST00000466351 RILPL2Q969X0 211 aa8.26□□□□□ -1.09
CDHR3-204ENST00000466351 COPRSQ9NQ92 184 aa8.26□□□□□ -1.09
CDHR3-204ENST00000466351 DIAPH3Q9NSV4 1193 aa8.26□□□□□ -1.09
CDHR3-204ENST00000466351 LIMCH1Q9UPQ0 1083 aa8.26□□□□□ -1.09
CDHR3-204ENST00000466351 MAP3K2Q9Y2U5 619 aa8.26□□□□□ -1.09
CDHR3-204ENST00000466351 ZDHHC9Q9Y397 364 aa8.26□□□□□ -1.09
CDHR3-204ENST00000466351 TNS2Q63HR2 1409 aa8.26□□□□□ -1.09
CDHR3-204ENST00000466351 WNK3Q9BYP7 1800 aa8.25□□□□□ -1.09
CDHR3-204ENST00000466351 SNRPA1P09661 255 aaKnown RBP8.25□□□□□ -1.09
CDHR3-204ENST00000466351 IFIT2P09913 472 aaKnown RBP8.25□□□□□ -1.09
CDHR3-204ENST00000466351 PHKG2P15735 406 aa8.25□□□□□ -1.09
CDHR3-204ENST00000466351 ZKSCAN1P17029 563 aaPredicted RBP8.25□□□□□ -1.09
CDHR3-204ENST00000466351 ATF3P18847 181 aa8.25□□□□□ -1.09
CDHR3-204ENST00000466351 EIF2S2P20042 333 aaKnown RBP8.25□□□□□ -1.09
CDHR3-204ENST00000466351 PSMA5P28066 241 aa8.25□□□□□ -1.09
CDHR3-204ENST00000466351 PDIA6Q15084 440 aa8.25□□□□□ -1.09
CDHR3-204ENST00000466351 ZSCAN23Q3MJ62 389 aa8.25□□□□□ -1.09
CDHR3-204ENST00000466351 RNF20Q5VTR2 975 aa8.25□□□□□ -1.09
CDHR3-204ENST00000466351 PROSER2Q86WR7 435 aaPredicted RBP8.25□□□□□ -1.09
CDHR3-204ENST00000466351 LRRC59Q96AG4 307 aaKnown RBP8.25□□□□□ -1.09
CDHR3-204ENST00000466351 CHMP4CQ96CF2 233 aa8.25□□□□□ -1.09
CDHR3-204ENST00000466351 TRIM44Q96DX7 344 aaPredicted RBP8.25□□□□□ -1.09
CDHR3-204ENST00000466351 PDLIM2Q96JY6 352 aa8.25□□□□□ -1.09
CDHR3-204ENST00000466351 ORAI2Q96SN7 254 aa8.25□□□□□ -1.09
CDHR3-204ENST00000466351 METTL22Q9BUU2 404 aaPredicted RBP8.25□□□□□ -1.09
CDHR3-204ENST00000466351 FBXO3Q9UK99 471 aa8.25□□□□□ -1.09
CDHR3-204ENST00000466351 DDX60Q8IY21 1712 aaKnown RBP8.25□□□□□ -1.09
CDHR3-204ENST00000466351 SPATA31A3Q5VYP0 1347 aa8.25□□□□□ -1.09
CDHR3-204ENST00000466351 KCPQ6ZWJ8 1503 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms