RNA–Protein interactions for RNA: ENST00000466154.5

SLX4-202, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

TSL 1 (best)

Gene SLX4, Length 3,228 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-202ENST00000466154 RGPD2P0DJD1 1756 aa19.75■□□□□ 0.75
SLX4-202ENST00000466154 COPS6Q7L5N1 327 aa19.75■□□□□ 0.75
SLX4-202ENST00000466154 ECHDC1Q9NTX5 307 aa19.75■□□□□ 0.75
SLX4-202ENST00000466154 ANAPC15P60006 121 aa19.74■□□□□ 0.75
SLX4-202ENST00000466154 PTH1RQ03431 593 aa19.74■□□□□ 0.75
SLX4-202ENST00000466154 HYPKQ9NX55 129 aa19.74■□□□□ 0.75
SLX4-202ENST00000466154 TLR7Q9NYK1 1049 aaKnown RBP19.74■□□□□ 0.75
SLX4-202ENST00000466154 CHMP3Q9Y3E7 222 aa19.74■□□□□ 0.75
SLX4-202ENST00000466154 ERBB4Q15303 1308 aa19.74■□□□□ 0.75
SLX4-202ENST00000466154 ESPNB1AK53 854 aa19.74■□□□□ 0.75
SLX4-202ENST00000466154 ATP5J2-PTCD1G3V325 749 aa19.74■□□□□ 0.75
SLX4-202ENST00000466154 PTCD1O75127 700 aaKnown RBP19.74■□□□□ 0.75
SLX4-202ENST00000466154 JAKMIP1Q96N16 626 aaKnown RBP19.74■□□□□ 0.75
SLX4-202ENST00000466154 TATP17735 454 aaPredicted RBP19.74■□□□□ 0.75
SLX4-202ENST00000466154 AK2P54819 239 aa19.74■□□□□ 0.75
SLX4-202ENST00000466154 NEXNQ0ZGT2 675 aa19.74■□□□□ 0.75
SLX4-202ENST00000466154 ZNF790Q6PG37 636 aa19.74■□□□□ 0.75
SLX4-202ENST00000466154 TTC5Q8N0Z6 440 aa19.74■□□□□ 0.75
SLX4-202ENST00000466154 TMEM63CQ9P1W3 806 aa19.74■□□□□ 0.75
SLX4-202ENST00000466154 ISY1Q9ULR0 285 aaKnown RBP19.74■□□□□ 0.75
SLX4-202ENST00000466154 NDUFB9Q9Y6M9 179 aa19.74■□□□□ 0.75
SLX4-202ENST00000466154 CLEC17AQ6ZS10 378 aa19.73■□□□□ 0.75
SLX4-202ENST00000466154 NFAT5O94916 1531 aa19.73■□□□□ 0.75
SLX4-202ENST00000466154 TCEANC2Q96MN5 208 aa19.73■□□□□ 0.75
SLX4-202ENST00000466154 RBSNQ9H1K0 784 aa19.73■□□□□ 0.75
SLX4-202ENST00000466154 MARF1Q9Y4F3 1742 aaKnown RBP19.73■□□□□ 0.75
SLX4-202ENST00000466154 LRRC37A3O60309 1634 aa19.73■□□□□ 0.75
SLX4-202ENST00000466154 RAD50Q92878 1312 aa19.73■□□□□ 0.75
SLX4-202ENST00000466154 NPHP4O75161 1426 aaPredicted RBP19.72■□□□□ 0.75
SLX4-202ENST00000466154 FAM227BQ96M60 508 aa19.72■□□□□ 0.75
SLX4-202ENST00000466154 ZNF496Q96IT1 587 aaPredicted RBP19.72■□□□□ 0.75
SLX4-202ENST00000466154 LSG1Q9H089 658 aaKnown RBP19.72■□□□□ 0.75
SLX4-202ENST00000466154 ERBB3P21860 1342 aa19.72■□□□□ 0.75
SLX4-202ENST00000466154 LINS1Q8NG48 757 aa19.72■□□□□ 0.75
SLX4-202ENST00000466154 EDC3Q96F86 508 aaKnown RBP19.72■□□□□ 0.75
SLX4-202ENST00000466154 USP16Q9Y5T5 823 aa19.72■□□□□ 0.75
SLX4-202ENST00000466154 CCDC83Q8IWF9 413 aa19.71■□□□□ 0.75
SLX4-202ENST00000466154 FSD1Q9BTV5 496 aa19.71■□□□□ 0.75
SLX4-202ENST00000466154 DDX21Q9NR30 783 aaKnown RBP eCLIP19.71■□□□□ 0.75
SLX4-202ENST00000466154 ZNF330Q9Y3S2 320 aaPredicted RBP19.71■□□□□ 0.75
SLX4-202ENST00000466154 AOX1Q06278 1338 aa19.71■□□□□ 0.75
SLX4-202ENST00000466154 ALDH1L1O75891 902 aa19.71■□□□□ 0.75
SLX4-202ENST00000466154 ADCK5Q3MIX3 580 aa19.71■□□□□ 0.75
SLX4-202ENST00000466154 EAF2Q96CJ1 260 aaPredicted RBP19.71■□□□□ 0.75
SLX4-202ENST00000466154 PXDNLA1KZ92 1463 aa19.7■□□□□ 0.74
SLX4-202ENST00000466154 BRD1O95696 1058 aa19.7■□□□□ 0.74
SLX4-202ENST00000466154 GADD45BO75293 160 aaPredicted RBP19.7■□□□□ 0.74
SLX4-202ENST00000466154 RUFY2Q8WXA3 655 aa19.7■□□□□ 0.74
SLX4-202ENST00000466154 CUL4AQ13619 759 aa19.7■□□□□ 0.74
SLX4-202ENST00000466154 IGKV5-2P06315 115 aa19.69■□□□□ 0.74
SLX4-202ENST00000466154 C19orf44Q9H6X5 657 aa19.69■□□□□ 0.74
SLX4-202ENST00000466154 SMC3Q9UQE7 1217 aa19.69■□□□□ 0.74
SLX4-202ENST00000466154 SASH1O94885 1247 aa19.69■□□□□ 0.74
SLX4-202ENST00000466154 LARGE1O95461 756 aa19.68■□□□□ 0.74
SLX4-202ENST00000466154 UBE3BQ7Z3V4 1068 aa19.68■□□□□ 0.74
SLX4-202ENST00000466154 NECAB1Q8N987 351 aa19.68■□□□□ 0.74
SLX4-202ENST00000466154 KAZALD1Q96I82 304 aa19.68■□□□□ 0.74
SLX4-202ENST00000466154 SLC52A2Q9HAB3 445 aa19.68■□□□□ 0.74
SLX4-202ENST00000466154 RUFY3Q7L099 469 aa19.68■□□□□ 0.74
SLX4-202ENST00000466154 ERC1Q8IUD2 1116 aa19.68■□□□□ 0.74
SLX4-202ENST00000466154 MPNDQ8N594 471 aa19.68■□□□□ 0.74
SLX4-202ENST00000466154 FIBPO43427 364 aa19.68■□□□□ 0.74
SLX4-202ENST00000466154 EPHA10Q5JZY3 1008 aa19.68■□□□□ 0.74
SLX4-202ENST00000466154 VPS37CA5D8V6 355 aaPredicted RBP19.67■□□□□ 0.74
SLX4-202ENST00000466154 NMIQ13287 307 aaPredicted RBP19.67■□□□□ 0.74
SLX4-202ENST00000466154 PDRG1Q9NUG6 133 aa19.67■□□□□ 0.74
SLX4-202ENST00000466154 NPHP3Q7Z494 1330 aa19.67■□□□□ 0.74
SLX4-202ENST00000466154 LARP1Q6PKG0 1096 aaKnown RBP19.67■□□□□ 0.74
SLX4-202ENST00000466154 USP48Q86UV5 1035 aa19.67■□□□□ 0.74
SLX4-202ENST00000466154 TTC41PQ6P2S7 1318 aa19.67■□□□□ 0.74
SLX4-202ENST00000466154 CCDC173Q0VFZ6 552 aa19.66■□□□□ 0.74
SLX4-202ENST00000466154 PDIA6Q15084 440 aa19.66■□□□□ 0.74
SLX4-202ENST00000466154 DNAJC2Q99543 621 aaKnown RBP19.66■□□□□ 0.74
SLX4-202ENST00000466154 LIMCH1Q9UPQ0 1083 aa19.66■□□□□ 0.74
SLX4-202ENST00000466154 CNPY2Q9Y2B0 182 aa19.66■□□□□ 0.74
SLX4-202ENST00000466154 PHKG2P15735 406 aa19.66■□□□□ 0.74
SLX4-202ENST00000466154 INTS4Q96HW7 963 aaKnown RBP19.66■□□□□ 0.74
SLX4-202ENST00000466154 WDR33Q9C0J8 1336 aaKnown RBP19.66■□□□□ 0.74
SLX4-202ENST00000466154 CABP4P57796 275 aa19.66■□□□□ 0.74
SLX4-202ENST00000466154 ANKRD13DQ6ZTN6 518 aa19.66■□□□□ 0.74
SLX4-202ENST00000466154 HDAC5Q9UQL6 1122 aa19.66■□□□□ 0.74
SLX4-202ENST00000466154 ZKSCAN1P17029 563 aaPredicted RBP19.65■□□□□ 0.74
SLX4-202ENST00000466154 ZNF445P59923 1031 aa19.65■□□□□ 0.74
SLX4-202ENST00000466154 CHD2O14647 1828 aaKnown RBP19.65■□□□□ 0.74
SLX4-202ENST00000466154 STK3Q13188 491 aa19.65■□□□□ 0.74
SLX4-202ENST00000466154 EVI5LQ96CN4 794 aa19.65■□□□□ 0.74
SLX4-202ENST00000466154 RBM8AQ9Y5S9 174 aaKnown RBP19.65■□□□□ 0.74
SLX4-202ENST00000466154 NEURL1BA8MQ27 555 aa19.64■□□□□ 0.74
SLX4-202ENST00000466154 IFNL2Q8IZJ0 200 aa19.64■□□□□ 0.74
SLX4-202ENST00000466154 CYP46A1Q9Y6A2 500 aa19.64■□□□□ 0.74
SLX4-202ENST00000466154 CHGBP05060 677 aa19.64■□□□□ 0.73
SLX4-202ENST00000466154 CLCN1P35523 988 aa19.64■□□□□ 0.73
SLX4-202ENST00000466154 COL9A3Q14050 684 aaPredicted RBP19.64■□□□□ 0.73
SLX4-202ENST00000466154 GCKRQ14397 625 aa19.64■□□□□ 0.73
SLX4-202ENST00000466154 PLCB2Q00722 1185 aa19.63■□□□□ 0.73
SLX4-202ENST00000466154 A0A087WZG4 1122 aa19.63■□□□□ 0.73
SLX4-202ENST00000466154 A0A0D9SFI3 127 aa19.63■□□□□ 0.73
SLX4-202ENST00000466154 SYT1P21579 422 aa19.63■□□□□ 0.73
SLX4-202ENST00000466154 MSNP26038 577 aaKnown RBP19.63■□□□□ 0.73
SLX4-202ENST00000466154 HSPA2P54652 639 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms