RNA–Protein interactions for RNA: ENST00000465934.1

CACNA1C-224, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 4

Gene CACNA1C, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-224ENST00000465934 PRELPP51888 382 aa18.48■□□□□ 0.55
CACNA1C-224ENST00000465934 TTLL7Q6ZT98 887 aa18.48■□□□□ 0.55
CACNA1C-224ENST00000465934 NBPF5PQ86XG9 351 aaPredicted RBP18.48■□□□□ 0.55
CACNA1C-224ENST00000465934 RUNDC1Q96C34 613 aa18.48■□□□□ 0.55
CACNA1C-224ENST00000465934 RNF181Q9P0P0 153 aa18.48■□□□□ 0.55
CACNA1C-224ENST00000465934 NIP7Q9Y221 180 aaKnown RBP eCLIP18.48■□□□□ 0.55
CACNA1C-224ENST00000465934 ANKRD31Q8N7Z5 1873 aa18.48■□□□□ 0.55
CACNA1C-224ENST00000465934 LAMB4A4D0S4 1761 aa18.47■□□□□ 0.55
CACNA1C-224ENST00000465934 CEP350Q5VT06 3117 aa18.47■□□□□ 0.55
CACNA1C-224ENST00000465934 FAM177BA6PVY3 158 aa18.47■□□□□ 0.55
CACNA1C-224ENST00000465934 KIF3CO14782 793 aa18.47■□□□□ 0.55
CACNA1C-224ENST00000465934 ST5P78524 1137 aa18.47■□□□□ 0.55
CACNA1C-224ENST00000465934 ZNF219Q9P2Y4 722 aaPredicted RBP18.47■□□□□ 0.55
CACNA1C-224ENST00000465934 TRIM35Q9UPQ4 493 aa18.47■□□□□ 0.55
CACNA1C-224ENST00000465934 COL11A2P13942 1736 aaPredicted RBP18.46■□□□□ 0.55
CACNA1C-224ENST00000465934 DLEC1Q9Y238 1755 aa18.46■□□□□ 0.55
CACNA1C-224ENST00000465934 LMOD3Q0VAK6 560 aa18.46■□□□□ 0.55
CACNA1C-224ENST00000465934 NFKBIEO00221 500 aa18.45■□□□□ 0.54
CACNA1C-224ENST00000465934 NMRK2Q9NPI5 230 aa18.45■□□□□ 0.54
CACNA1C-224ENST00000465934 RGL2O15211 777 aa18.44■□□□□ 0.54
CACNA1C-224ENST00000465934 C21orf2O43822 256 aa18.44■□□□□ 0.54
CACNA1C-224ENST00000465934 SRGNP10124 158 aa18.44■□□□□ 0.54
CACNA1C-224ENST00000465934 EIF2S2P20042 333 aaKnown RBP18.44■□□□□ 0.54
CACNA1C-224ENST00000465934 KRT24Q2M2I5 525 aa18.44■□□□□ 0.54
CACNA1C-224ENST00000465934 ZBTB3Q9H5J0 574 aa18.44■□□□□ 0.54
CACNA1C-224ENST00000465934 MAP3K15Q6ZN16 1313 aa18.44■□□□□ 0.54
CACNA1C-224ENST00000465934 ANXA1P04083 346 aa18.43■□□□□ 0.54
CACNA1C-224ENST00000465934 PDIA6Q15084 440 aa18.43■□□□□ 0.54
CACNA1C-224ENST00000465934 PROSER3Q2NL68 480 aa18.43■□□□□ 0.54
CACNA1C-224ENST00000465934 LRP10Q7Z4F1 713 aa18.43■□□□□ 0.54
CACNA1C-224ENST00000465934 PDZRN3Q9UPQ7 1066 aa18.43■□□□□ 0.54
CACNA1C-224ENST00000465934 LAS1LQ9Y4W2 734 aaKnown RBP18.43■□□□□ 0.54
CACNA1C-224ENST00000465934 ERVV-1B6SEH8 477 aa18.42■□□□□ 0.54
CACNA1C-224ENST00000465934 PRPF40BQ6NWY9 871 aaKnown RBP18.42■□□□□ 0.54
CACNA1C-224ENST00000465934 KIF6Q6ZMV9 814 aa18.42■□□□□ 0.54
CACNA1C-224ENST00000465934 NECTIN2Q92692 538 aa18.42■□□□□ 0.54
CACNA1C-224ENST00000465934 BABAM1Q9NWV8 329 aa18.42■□□□□ 0.54
CACNA1C-224ENST00000465934 CHL1O00533 1208 aa18.41■□□□□ 0.54
CACNA1C-224ENST00000465934 LMNB1P20700 586 aa18.41■□□□□ 0.54
CACNA1C-224ENST00000465934 GPTP24298 496 aa18.41■□□□□ 0.54
CACNA1C-224ENST00000465934 STYK1Q6J9G0 422 aa18.41■□□□□ 0.54
CACNA1C-224ENST00000465934 TPTE2Q6XPS3 522 aa18.41■□□□□ 0.54
CACNA1C-224ENST00000465934 MASTLQ96GX5 879 aa18.41■□□□□ 0.54
CACNA1C-224ENST00000465934 ERBB4Q15303 1308 aa18.41■□□□□ 0.54
CACNA1C-224ENST00000465934 UBN2Q6ZU65 1347 aa18.41■□□□□ 0.54
CACNA1C-224ENST00000465934 ABCC12Q96J65 1359 aa18.41■□□□□ 0.54
CACNA1C-224ENST00000465934 ZEB1P37275 1124 aaPredicted RBP18.4■□□□□ 0.54
CACNA1C-224ENST00000465934 CCDC184Q52MB2 194 aa18.4■□□□□ 0.54
CACNA1C-224ENST00000465934 NUTM1Q86Y26 1132 aa18.4■□□□□ 0.54
CACNA1C-224ENST00000465934 KLRG2A4D1S0 409 aaPredicted RBP18.39■□□□□ 0.53
CACNA1C-224ENST00000465934 CNKSR1Q969H4 720 aa18.39■□□□□ 0.53
CACNA1C-224ENST00000465934 APAF1O14727 1248 aa18.38■□□□□ 0.53
CACNA1C-224ENST00000465934 ERFEQ4G0M1 354 aa18.38■□□□□ 0.53
CACNA1C-224ENST00000465934 NPR1P16066 1061 aa18.37■□□□□ 0.53
CACNA1C-224ENST00000465934 GTF2E1P29083 439 aaPredicted RBP18.37■□□□□ 0.53
CACNA1C-224ENST00000465934 SUSD4Q5VX71 490 aa18.37■□□□□ 0.53
CACNA1C-224ENST00000465934 OLFM4Q6UX06 510 aa18.37■□□□□ 0.53
CACNA1C-224ENST00000465934 GIGYF2Q6Y7W6 1299 aaKnown RBP18.36■□□□□ 0.53
CACNA1C-224ENST00000465934 ZNF34Q8IZ26 560 aa18.36■□□□□ 0.53
CACNA1C-224ENST00000465934 KDM2BQ8NHM5 1336 aa18.36■□□□□ 0.53
CACNA1C-224ENST00000465934 C7orf43Q8WVR3 580 aa18.36■□□□□ 0.53
CACNA1C-224ENST00000465934 TNRC6CQ9HCJ0 1690 aaKnown RBP18.36■□□□□ 0.53
CACNA1C-224ENST00000465934 SBF1O95248 1867 aa18.35■□□□□ 0.53
CACNA1C-224ENST00000465934 SLX4Q8IY92 1834 aa18.35■□□□□ 0.53
CACNA1C-224ENST00000465934 HSPA6P17066 643 aa18.35■□□□□ 0.53
CACNA1C-224ENST00000465934 AIMP1Q12904 312 aaKnown RBP18.35■□□□□ 0.53
CACNA1C-224ENST00000465934 XAGE3Q8WTP9 111 aa18.35■□□□□ 0.53
CACNA1C-224ENST00000465934 NYXQ9GZU5 481 aa18.35■□□□□ 0.53
CACNA1C-224ENST00000465934 TAOK3Q9H2K8 898 aa18.35■□□□□ 0.53
CACNA1C-224ENST00000465934 RRAGCQ9HB90 399 aa18.35■□□□□ 0.53
CACNA1C-224ENST00000465934 ZC3H4Q9UPT8 1303 aaKnown RBP18.34■□□□□ 0.53
CACNA1C-224ENST00000465934 TOMM70O94826 608 aa18.34■□□□□ 0.53
CACNA1C-224ENST00000465934 NTSR2O95665 410 aa18.34■□□□□ 0.53
CACNA1C-224ENST00000465934 COPS6Q7L5N1 327 aa18.34■□□□□ 0.53
CACNA1C-224ENST00000465934 CFAP44Q96MT7 982 aa18.34■□□□□ 0.53
CACNA1C-224ENST00000465934 MBIPQ9NS73 344 aa18.34■□□□□ 0.53
CACNA1C-224ENST00000465934 CHPF2Q9P2E5 772 aa18.34■□□□□ 0.53
CACNA1C-224ENST00000465934 LTBP3Q9NS15 1303 aa18.33■□□□□ 0.53
CACNA1C-224ENST00000465934 CRY2Q49AN0 593 aa18.33■□□□□ 0.52
CACNA1C-224ENST00000465934 C3orf67Q6ZVT6 689 aa18.33■□□□□ 0.52
CACNA1C-224ENST00000465934 DDX21Q9NR30 783 aaKnown RBP eCLIP18.33■□□□□ 0.52
CACNA1C-224ENST00000465934 IBTKQ9P2D0 1353 aaPredicted RBP18.32■□□□□ 0.52
CACNA1C-224ENST00000465934 ZNF316A6NFI3 1004 aaPredicted RBP18.32■□□□□ 0.52
CACNA1C-224ENST00000465934 GLTPD2A6NH11 291 aa18.32■□□□□ 0.52
CACNA1C-224ENST00000465934 ZNF853P0CG23 659 aa18.32■□□□□ 0.52
CACNA1C-224ENST00000465934 HDGFL1Q5TGJ6 251 aa18.32■□□□□ 0.52
CACNA1C-224ENST00000465934 SLC51AQ86UW1 340 aa18.32■□□□□ 0.52
CACNA1C-224ENST00000465934 NUP98P52948 1817 aa18.31■□□□□ 0.52
CACNA1C-224ENST00000465934 CCDC93Q567U6 631 aa18.31■□□□□ 0.52
CACNA1C-224ENST00000465934 SOGA3Q5TF21 947 aa18.31■□□□□ 0.52
CACNA1C-224ENST00000465934 DUSP27Q5VZP5 1158 aa18.31■□□□□ 0.52
CACNA1C-224ENST00000465934 TIAM2Q8IVF5 1701 aa18.3■□□□□ 0.52
CACNA1C-224ENST00000465934 C16orf71Q8IYS4 520 aaPredicted RBP18.3■□□□□ 0.52
CACNA1C-224ENST00000465934 ZNF428Q96B54 188 aa18.3■□□□□ 0.52
CACNA1C-224ENST00000465934 FER1L6Q2WGJ9 1857 aa18.29■□□□□ 0.52
CACNA1C-224ENST00000465934 HOXB7P09629 217 aa18.29■□□□□ 0.52
CACNA1C-224ENST00000465934 PARP10Q53GL7 1025 aa18.29■□□□□ 0.52
CACNA1C-224ENST00000465934 PPP1R42Q7Z4L9 355 aa18.29■□□□□ 0.52
CACNA1C-224ENST00000465934 RBM46Q8TBY0 533 aaKnown RBP18.29■□□□□ 0.52
CACNA1C-224ENST00000465934 UTP14AQ9BVJ6 771 aaKnown RBP18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms