RNA–Protein interactions for RNA: ENST00000465860.5

EXOSC3-204, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-204ENST00000465860 COG6Q9Y2V7 657 aa7.61□□□□□ -1.19
EXOSC3-204ENST00000465860 DIP2CQ9Y2E4 1556 aa7.61□□□□□ -1.19
EXOSC3-204ENST00000465860 ZFYVE16Q7Z3T8 1539 aa7.61□□□□□ -1.19
EXOSC3-204ENST00000465860 NCOA2Q15596 1464 aa7.61□□□□□ -1.19
EXOSC3-204ENST00000465860 LRRC9Q6ZRR7 1453 aa7.61□□□□□ -1.19
EXOSC3-204ENST00000465860 MADDQ8WXG6 1647 aa7.6□□□□□ -1.19
EXOSC3-204ENST00000465860 HECW2Q9P2P5 1572 aa7.6□□□□□ -1.19
EXOSC3-204ENST00000465860 THBS1P07996 1170 aa7.6□□□□□ -1.19
EXOSC3-204ENST00000465860 SEMA3FQ13275 785 aa7.6□□□□□ -1.19
EXOSC3-204ENST00000465860 ESCO1Q5FWF5 840 aa7.6□□□□□ -1.19
EXOSC3-204ENST00000465860 FOXR1Q6PIV2 292 aa7.6□□□□□ -1.19
EXOSC3-204ENST00000465860 NUCKS1Q9H1E3 243 aaKnown RBP7.6□□□□□ -1.19
EXOSC3-204ENST00000465860 ZNF777Q9ULD5 760 aaPredicted RBP7.6□□□□□ -1.19
EXOSC3-204ENST00000465860 ZNF518AQ6AHZ1 1483 aa7.6□□□□□ -1.19
EXOSC3-204ENST00000465860 CCNB3Q8WWL7 1395 aa7.59□□□□□ -1.19
EXOSC3-204ENST00000465860 CELA2BP08218 269 aaPredicted RBP7.59□□□□□ -1.19
EXOSC3-204ENST00000465860 HNRNPMP52272 730 aaKnown RBP eCLIP7.59□□□□□ -1.19
EXOSC3-204ENST00000465860 C4orf17Q53FE4 359 aa7.59□□□□□ -1.19
EXOSC3-204ENST00000465860 TMEM214Q6NUQ4 689 aaKnown RBP7.59□□□□□ -1.19
EXOSC3-204ENST00000465860 PLPP7Q8NBV4 271 aa7.59□□□□□ -1.19
EXOSC3-204ENST00000465860 SIRT1Q96EB6 747 aa7.59□□□□□ -1.19
EXOSC3-204ENST00000465860 GPAMQ9HCL2 828 aa7.59□□□□□ -1.19
EXOSC3-204ENST00000465860 RIMS1Q86UR5 1692 aaKnown RBP7.59□□□□□ -1.19
EXOSC3-204ENST00000465860 SOX11P35716 441 aa7.58□□□□□ -1.2
EXOSC3-204ENST00000465860 SCNN1DP51172 638 aa7.58□□□□□ -1.2
EXOSC3-204ENST00000465860 MAP7D1Q3KQU3 841 aa7.58□□□□□ -1.2
EXOSC3-204ENST00000465860 GNASQ5JWF2 1037 aa7.58□□□□□ -1.2
EXOSC3-204ENST00000465860 TRERF1Q96PN7 1200 aa7.58□□□□□ -1.2
EXOSC3-204ENST00000465860 MAP3K1Q13233 1512 aa7.57□□□□□ -1.2
EXOSC3-204ENST00000465860 ATP10AO60312 1499 aa7.57□□□□□ -1.2
EXOSC3-204ENST00000465860 MAGI2Q86UL8 1455 aa7.57□□□□□ -1.2
EXOSC3-204ENST00000465860 MBD5Q9P267 1494 aa7.57□□□□□ -1.2
EXOSC3-204ENST00000465860 A0A1B0GTH6 734 aa7.57□□□□□ -1.2
EXOSC3-204ENST00000465860 PIK3CDO00329 1044 aa7.57□□□□□ -1.2
EXOSC3-204ENST00000465860 TLR1Q15399 786 aa7.57□□□□□ -1.2
EXOSC3-204ENST00000465860 POM121Q96HA1 1249 aa7.57□□□□□ -1.2
EXOSC3-204ENST00000465860 CFDP1Q9UEE9 299 aaPredicted RBP7.57□□□□□ -1.2
EXOSC3-204ENST00000465860 INO80Q9ULG1 1556 aaPredicted RBP7.57□□□□□ -1.2
EXOSC3-204ENST00000465860 FER1L4A9Z1Z3 1794 aa7.56□□□□□ -1.2
EXOSC3-204ENST00000465860 CAMSAP2Q08AD1 1489 aa7.56□□□□□ -1.2
EXOSC3-204ENST00000465860 MLH3Q9UHC1 1453 aa7.56□□□□□ -1.2
EXOSC3-204ENST00000465860 GTF2E1P29083 439 aaPredicted RBP7.56□□□□□ -1.2
EXOSC3-204ENST00000465860 GDF10P55107 478 aa7.56□□□□□ -1.2
EXOSC3-204ENST00000465860 RASSF7Q02833 373 aa7.56□□□□□ -1.2
EXOSC3-204ENST00000465860 PPARGC1BQ86YN6 1023 aaKnown RBP7.56□□□□□ -1.2
EXOSC3-204ENST00000465860 RHBDD1Q8TEB9 315 aa7.56□□□□□ -1.2
EXOSC3-204ENST00000465860 ARID4BQ4LE39 1312 aaPredicted RBP7.55□□□□□ -1.2
EXOSC3-204ENST00000465860 C9orf84Q5VXU9 1444 aa7.55□□□□□ -1.2
EXOSC3-204ENST00000465860 ADGBQ8N7X0 1667 aa7.55□□□□□ -1.2
EXOSC3-204ENST00000465860 RNF225M0QZC1 329 aaPredicted RBP7.55□□□□□ -1.2
EXOSC3-204ENST00000465860 INHAP05111 366 aa7.55□□□□□ -1.2
EXOSC3-204ENST00000465860 MX2P20592 715 aa7.55□□□□□ -1.2
EXOSC3-204ENST00000465860 MSX1P28360 303 aa7.55□□□□□ -1.2
EXOSC3-204ENST00000465860 MAP3K10Q02779 954 aa7.55□□□□□ -1.2
EXOSC3-204ENST00000465860 UBAP2LQ14157 1087 aaKnown RBP7.55□□□□□ -1.2
EXOSC3-204ENST00000465860 RUBCNLQ9H714 662 aa7.55□□□□□ -1.2
EXOSC3-204ENST00000465860 ATP7AQ04656 1500 aa7.55□□□□□ -1.2
EXOSC3-204ENST00000465860 PTPRMP28827 1452 aa7.55□□□□□ -1.2
EXOSC3-204ENST00000465860 KIAA1107Q9UPP5 1409 aa7.54□□□□□ -1.2
EXOSC3-204ENST00000465860 MARSP56192 900 aaKnown RBP7.54□□□□□ -1.2
EXOSC3-204ENST00000465860 MLECQ14165 292 aa7.54□□□□□ -1.2
EXOSC3-204ENST00000465860 TMEM151AQ8N4L1 468 aa7.54□□□□□ -1.2
EXOSC3-204ENST00000465860 KCTD17Q8N5Z5 321 aa7.54□□□□□ -1.2
EXOSC3-204ENST00000465860 ACDQ96AP0 544 aa7.54□□□□□ -1.2
EXOSC3-204ENST00000465860 ALG2Q9H553 416 aa7.54□□□□□ -1.2
EXOSC3-204ENST00000465860 REREQ9P2R6 1566 aa7.54□□□□□ -1.2
EXOSC3-204ENST00000465860 TMEM229AB2RXF0 380 aa7.53□□□□□ -1.2
EXOSC3-204ENST00000465860 GDF11O95390 407 aa7.53□□□□□ -1.2
EXOSC3-204ENST00000465860 CFHR5Q9BXR6 569 aa7.53□□□□□ -1.2
EXOSC3-204ENST00000465860 PLXNC1O60486 1568 aa7.53□□□□□ -1.2
EXOSC3-204ENST00000465860 MYOM3Q5VTT5 1437 aa7.52□□□□□ -1.2
EXOSC3-204ENST00000465860 ARHGEF5Q12774 1597 aa7.52□□□□□ -1.21
EXOSC3-204ENST00000465860 PLEKHH2Q8IVE3 1493 aa7.52□□□□□ -1.21
EXOSC3-204ENST00000465860 BCRP11274 1271 aa7.52□□□□□ -1.21
EXOSC3-204ENST00000465860 SKIP12755 728 aa7.52□□□□□ -1.21
EXOSC3-204ENST00000465860 IRS1P35568 1242 aa7.52□□□□□ -1.21
EXOSC3-204ENST00000465860 PLA2G4AP47712 749 aa7.52□□□□□ -1.21
EXOSC3-204ENST00000465860 SMTNP53814 917 aa7.52□□□□□ -1.21
EXOSC3-204ENST00000465860 SERTAD1Q9UHV2 236 aa7.52□□□□□ -1.21
EXOSC3-204ENST00000465860 PCDHGA11Q9Y5H2 935 aa7.52□□□□□ -1.21
EXOSC3-204ENST00000465860 SPAG9O60271 1321 aaKnown RBP7.52□□□□□ -1.21
EXOSC3-204ENST00000465860 CROCC2H7BZ55 1655 aa7.51□□□□□ -1.21
EXOSC3-204ENST00000465860 CSB-PGBD3P0DP91 1061 aa7.51□□□□□ -1.21
EXOSC3-204ENST00000465860 LBRQ14739 615 aaKnown RBP7.51□□□□□ -1.21
EXOSC3-204ENST00000465860 PGBD3Q8N328 593 aa7.51□□□□□ -1.21
EXOSC3-204ENST00000465860 SCARF2Q96GP6 870 aaPredicted RBP7.51□□□□□ -1.21
EXOSC3-204ENST00000465860 ENAMQ9NRM1 1142 aa7.51□□□□□ -1.21
EXOSC3-204ENST00000465860 PTPN23Q9H3S7 1636 aa7.51□□□□□ -1.21
EXOSC3-204ENST00000465860 AGLP35573 1532 aa7.51□□□□□ -1.21
EXOSC3-204ENST00000465860 C3P01024 1663 aa7.51□□□□□ -1.21
EXOSC3-204ENST00000465860 CCDC141Q6ZP82 1450 aa7.5□□□□□ -1.21
EXOSC3-204ENST00000465860 CEBPAP49715 358 aaPredicted RBP7.5□□□□□ -1.21
EXOSC3-204ENST00000465860 EML3Q32P44 896 aa7.5□□□□□ -1.21
EXOSC3-204ENST00000465860 EFHC2Q5JST6 749 aa7.5□□□□□ -1.21
EXOSC3-204ENST00000465860 TBC1D9Q6ZT07 1266 aa7.5□□□□□ -1.21
EXOSC3-204ENST00000465860 ZNF295-AS1Q8N0V1 137 aa7.5□□□□□ -1.21
EXOSC3-204ENST00000465860 SLC4A9Q96Q91 983 aa7.5□□□□□ -1.21
EXOSC3-204ENST00000465860 CRISPLD1Q9H336 500 aa7.5□□□□□ -1.21
EXOSC3-204ENST00000465860 NSFL1CQ9UNZ2 370 aaKnown RBP7.5□□□□□ -1.21
EXOSC3-204ENST00000465860 PHF24Q9UPV7 400 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms