RNA–Protein interactions for RNA: ENST00000465639.5

SSPO-203, Transcript of SCO-spondin, humanhuman

TSL 2

Gene SSPO, Length 3,479 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPO-203ENST00000465639 USP16Q9Y5T5 823 aa16.59■□□□□ 0.25
SSPO-203ENST00000465639 NCOA3Q9Y6Q9 1424 aa16.59■□□□□ 0.25
SSPO-203ENST00000465639 SSH2Q76I76 1423 aa16.59■□□□□ 0.25
SSPO-203ENST00000465639 ATF3P18847 181 aa16.59■□□□□ 0.25
SSPO-203ENST00000465639 MSNP26038 577 aaKnown RBP16.59■□□□□ 0.25
SSPO-203ENST00000465639 FGD1P98174 961 aa16.59■□□□□ 0.25
SSPO-203ENST00000465639 CNPY2Q9Y2B0 182 aa16.59■□□□□ 0.25
SSPO-203ENST00000465639 C3P01024 1663 aa16.59■□□□□ 0.25
SSPO-203ENST00000465639 DIP2AQ14689 1571 aa16.59■□□□□ 0.25
SSPO-203ENST00000465639 SNX14Q9Y5W7 946 aa16.58■□□□□ 0.25
SSPO-203ENST00000465639 SETD1AO15047 1707 aaKnown RBP16.58■□□□□ 0.25
SSPO-203ENST00000465639 RGPD8O14715 1765 aaPredicted RBP16.58■□□□□ 0.25
SSPO-203ENST00000465639 PI4K2BQ8TCG2 481 aa16.58■□□□□ 0.24
SSPO-203ENST00000465639 KSR2Q6VAB6 950 aa16.58■□□□□ 0.24
SSPO-203ENST00000465639 STRN4Q9NRL3 753 aa16.58■□□□□ 0.24
SSPO-203ENST00000465639 LARGE1O95461 756 aa16.57■□□□□ 0.24
SSPO-203ENST00000465639 COL9A3Q14050 684 aaPredicted RBP16.57■□□□□ 0.24
SSPO-203ENST00000465639 HSP90AA2PQ14568 343 aaPredicted RBP16.57■□□□□ 0.24
SSPO-203ENST00000465639 GPATCH3Q96I76 525 aa16.57■□□□□ 0.24
SSPO-203ENST00000465639 ZNF496Q96IT1 587 aaPredicted RBP16.57■□□□□ 0.24
SSPO-203ENST00000465639 RAB11FIP3O75154 756 aa16.57■□□□□ 0.24
SSPO-203ENST00000465639 DDX58O95786 925 aaKnown RBP16.57■□□□□ 0.24
SSPO-203ENST00000465639 LRRC2Q9BYS8 371 aa16.57■□□□□ 0.24
SSPO-203ENST00000465639 ECHDC1Q9NTX5 307 aa16.57■□□□□ 0.24
SSPO-203ENST00000465639 GRM8O00222 908 aa16.57■□□□□ 0.24
SSPO-203ENST00000465639 SLFNL1Q499Z3 407 aa16.57■□□□□ 0.24
SSPO-203ENST00000465639 ARHGEF25Q86VW2 580 aa16.57■□□□□ 0.24
SSPO-203ENST00000465639 EAF2Q96CJ1 260 aaPredicted RBP16.57■□□□□ 0.24
SSPO-203ENST00000465639 SGSM2O43147 1006 aa16.56■□□□□ 0.24
SSPO-203ENST00000465639 UBR1Q8IWV7 1749 aa16.56■□□□□ 0.24
SSPO-203ENST00000465639 GLRX3O76003 335 aaKnown RBP16.56■□□□□ 0.24
SSPO-203ENST00000465639 TATP17735 454 aaPredicted RBP16.56■□□□□ 0.24
SSPO-203ENST00000465639 PTMSP20962 102 aa16.55■□□□□ 0.24
SSPO-203ENST00000465639 USP48Q86UV5 1035 aa16.55■□□□□ 0.24
SSPO-203ENST00000465639 MON2Q7Z3U7 1717 aa16.55■□□□□ 0.24
SSPO-203ENST00000465639 AMOTQ4VCS5 1084 aa16.55■□□□□ 0.24
SSPO-203ENST00000465639 PDRG1Q9NUG6 133 aa16.55■□□□□ 0.24
SSPO-203ENST00000465639 NMIQ13287 307 aaPredicted RBP16.55■□□□□ 0.24
SSPO-203ENST00000465639 EPHA10Q5JZY3 1008 aa16.55■□□□□ 0.24
SSPO-203ENST00000465639 CCDC129Q6ZRS4 1044 aa16.55■□□□□ 0.24
SSPO-203ENST00000465639 ADCY9O60503 1353 aa16.55■□□□□ 0.24
SSPO-203ENST00000465639 HSP90AB4PQ58FF6 505 aa16.54■□□□□ 0.24
SSPO-203ENST00000465639 KDM4AO75164 1064 aa16.54■□□□□ 0.24
SSPO-203ENST00000465639 ZBTB3Q9H5J0 574 aa16.54■□□□□ 0.24
SSPO-203ENST00000465639 HSP90B1P14625 803 aaKnown RBP16.54■□□□□ 0.24
SSPO-203ENST00000465639 CEBPZQ03701 1054 aaKnown RBP16.54■□□□□ 0.24
SSPO-203ENST00000465639 ZNF790Q6PG37 636 aa16.54■□□□□ 0.24
SSPO-203ENST00000465639 SALL3Q9BXA9 1300 aa16.53■□□□□ 0.24
SSPO-203ENST00000465639 CABP4P57796 275 aa16.53■□□□□ 0.24
SSPO-203ENST00000465639 STAP2Q9UGK3 403 aa16.53■□□□□ 0.24
SSPO-203ENST00000465639 ZKSCAN1P17029 563 aaPredicted RBP16.53■□□□□ 0.24
SSPO-203ENST00000465639 DDX46Q7L014 1031 aaKnown RBP16.53■□□□□ 0.24
SSPO-203ENST00000465639 ZNF830Q96NB3 372 aaPredicted RBP16.53■□□□□ 0.24
SSPO-203ENST00000465639 A0A087WZG4 1122 aa16.53■□□□□ 0.24
SSPO-203ENST00000465639 HSPA4P34932 840 aa16.53■□□□□ 0.24
SSPO-203ENST00000465639 RUFY3Q7L099 469 aa16.53■□□□□ 0.24
SSPO-203ENST00000465639 RUFY2Q8WXA3 655 aa16.53■□□□□ 0.24
SSPO-203ENST00000465639 TAF6LQ9Y6J9 622 aa16.53■□□□□ 0.24
SSPO-203ENST00000465639 DDX11Q96FC9 970 aa16.52■□□□□ 0.24
SSPO-203ENST00000465639 SEC62Q99442 399 aaKnown RBP16.52■□□□□ 0.24
SSPO-203ENST00000465639 RBM8AQ9Y5S9 174 aaKnown RBP16.52■□□□□ 0.24
SSPO-203ENST00000465639 GJB2P29033 226 aa16.52■□□□□ 0.23
SSPO-203ENST00000465639 TFIP11Q9UBB9 837 aaKnown RBP16.52■□□□□ 0.23
SSPO-203ENST00000465639 SASH1O94885 1247 aa16.51■□□□□ 0.23
SSPO-203ENST00000465639 POLA2Q14181 598 aa16.51■□□□□ 0.23
SSPO-203ENST00000465639 LSG1Q9H089 658 aaKnown RBP16.51■□□□□ 0.23
SSPO-203ENST00000465639 CYP46A1Q9Y6A2 500 aa16.51■□□□□ 0.23
SSPO-203ENST00000465639 NRKQ7Z2Y5 1582 aa16.51■□□□□ 0.23
SSPO-203ENST00000465639 CYP2E1P05181 493 aaPredicted RBP16.51■□□□□ 0.23
SSPO-203ENST00000465639 MCM2P49736 904 aa16.51■□□□□ 0.23
SSPO-203ENST00000465639 DNTTIP2Q5QJE6 756 aaKnown RBP16.51■□□□□ 0.23
SSPO-203ENST00000465639 A0A0D9SFI3 127 aa16.51■□□□□ 0.23
SSPO-203ENST00000465639 SYT1P21579 422 aa16.51■□□□□ 0.23
SSPO-203ENST00000465639 DNM1Q05193 864 aaKnown RBP16.51■□□□□ 0.23
SSPO-203ENST00000465639 CAMK4Q16566 473 aa16.51■□□□□ 0.23
SSPO-203ENST00000465639 ANKRD13DQ6ZTN6 518 aa16.51■□□□□ 0.23
SSPO-203ENST00000465639 TOM1L2Q6ZVM7 507 aa16.51■□□□□ 0.23
SSPO-203ENST00000465639 HYPKQ9NX55 129 aa16.51■□□□□ 0.23
SSPO-203ENST00000465639 LIMCH1Q9UPQ0 1083 aa16.51■□□□□ 0.23
SSPO-203ENST00000465639 BRD1O95696 1058 aa16.5■□□□□ 0.23
SSPO-203ENST00000465639 IGKV5-2P06315 115 aa16.5■□□□□ 0.23
SSPO-203ENST00000465639 LINS1Q8NG48 757 aa16.5■□□□□ 0.23
SSPO-203ENST00000465639 BCL11BQ9C0K0 894 aaPredicted RBP16.5■□□□□ 0.23
SSPO-203ENST00000465639 RAD50Q92878 1312 aa16.5■□□□□ 0.23
SSPO-203ENST00000465639 REREQ9P2R6 1566 aa16.5■□□□□ 0.23
SSPO-203ENST00000465639 CCDC173Q0VFZ6 552 aa16.5■□□□□ 0.23
SSPO-203ENST00000465639 TFCP2Q12800 502 aa16.5■□□□□ 0.23
SSPO-203ENST00000465639 FBXW7Q969H0 707 aa16.5■□□□□ 0.23
SSPO-203ENST00000465639 KAT6BQ8WYB5 2073 aa16.49■□□□□ 0.23
SSPO-203ENST00000465639 GIMAP6Q6P9H5 292 aa16.49■□□□□ 0.23
SSPO-203ENST00000465639 DDX21Q9NR30 783 aaKnown RBP eCLIP16.49■□□□□ 0.23
SSPO-203ENST00000465639 SNRKQ9NRH2 765 aa16.49■□□□□ 0.23
SSPO-203ENST00000465639 PXDNQ92626 1479 aa16.49■□□□□ 0.23
SSPO-203ENST00000465639 WDR33Q9C0J8 1336 aaKnown RBP16.49■□□□□ 0.23
SSPO-203ENST00000465639 STX6O43752 255 aa16.49■□□□□ 0.23
SSPO-203ENST00000465639 ZNF594Q96JF6 807 aaPredicted RBP16.49■□□□□ 0.23
SSPO-203ENST00000465639 R3HCC1Q9Y3T6 440 aaKnown RBP16.49■□□□□ 0.23
SSPO-203ENST00000465639 AKAP12Q02952 1782 aa16.49■□□□□ 0.23
SSPO-203ENST00000465639 HSP90AB3PQ58FF7 597 aa16.49■□□□□ 0.23
SSPO-203ENST00000465639 SYTL4Q96C24 671 aaPredicted RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms